RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 PALD1Q9ULE6 856 aa4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 ZNF652Q9Y2D9 606 aa4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 HCFC2Q9Y5Z7 792 aa4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 X6R8D5 127 aa4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 PTPRGP23470 1445 aa4.68□□□□□ -1.66
HMGB3P11-201ENST00000440127 GPATCH8Q9UKJ3 1502 aaKnown RBP4.67□□□□□ -1.66
HMGB3P11-201ENST00000440127 KRIT1O00522 736 aa4.67□□□□□ -1.66
HMGB3P11-201ENST00000440127 U2SURPO15042 1029 aaKnown RBP4.67□□□□□ -1.66
HMGB3P11-201ENST00000440127 APPP05067 770 aa4.67□□□□□ -1.66
HMGB3P11-201ENST00000440127 KIAA2012Q0VF49 1180 aa4.67□□□□□ -1.66
HMGB3P11-201ENST00000440127 LSAMPQ13449 338 aa4.67□□□□□ -1.66
HMGB3P11-201ENST00000440127 VWA3BQ502W6 1294 aa4.67□□□□□ -1.66
HMGB3P11-201ENST00000440127 ZFYVE27Q5T4F4 411 aa4.67□□□□□ -1.66
HMGB3P11-201ENST00000440127 CEP68Q76N32 757 aa4.67□□□□□ -1.66
HMGB3P11-201ENST00000440127 TEX2Q8IWB9 1127 aa4.67□□□□□ -1.66
HMGB3P11-201ENST00000440127 GMLQ99445 158 aa4.67□□□□□ -1.66
HMGB3P11-201ENST00000440127 TANGO6Q9C0B7 1094 aa4.67□□□□□ -1.66
HMGB3P11-201ENST00000440127 ZNF408Q9H9D4 720 aa4.67□□□□□ -1.66
HMGB3P11-201ENST00000440127 DNMT1P26358 1616 aaKnown RBP4.67□□□□□ -1.66
HMGB3P11-201ENST00000440127 ATP10BO94823 1461 aa4.67□□□□□ -1.66
HMGB3P11-201ENST00000440127 GCC2Q8IWJ2 1684 aa4.67□□□□□ -1.66
HMGB3P11-201ENST00000440127 ABCA8O94911 1581 aa4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 HGSO14964 777 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 PLA2G1BP04054 148 aaKnown RBP4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 CANXP27824 592 aaKnown RBP4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 MC3RP41968 323 aa4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 GFRA1P56159 465 aa4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 HSP90AA2PQ14568 343 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 SPATS1Q496A3 300 aa4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 FAM26FQ5R3K3 315 aa4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 NT5DC1Q5TFE4 455 aa4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 CYP4F22Q6NT55 531 aa4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 RSPO2Q6UXX9 243 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 CD300LDQ6UXZ3 194 aa4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 DBX2Q6ZNG2 339 aa4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 MILR1Q7Z6M3 343 aa4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 PLEKHH3Q7Z736 793 aa4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 TRIM48Q8IWZ4 208 aa4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 ZDHHC14Q8IZN3 488 aa4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 LRRC47Q8N1G4 583 aaKnown RBP4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 LINC00482Q8N8I6 264 aa4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 KYQ8NBH2 561 aa4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 TP53I13Q8NBR0 393 aaPredicted RBP4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 C20orf173Q96LM9 149 aa4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 SPATA25Q9BR10 227 aa4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 TRIM55Q9BYV6 548 aa4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 RXFP1Q9HBX9 757 aa4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 PCDHB4Q9Y5E5 795 aa4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 CAMSAP2Q08AD1 1489 aa4.66□□□□□ -1.66
HMGB3P11-201ENST00000440127 ANKRD30BQ9BXX2 1392 aa4.65□□□□□ -1.66
HMGB3P11-201ENST00000440127 ANKRD30AQ9BXX3 1397 aa4.65□□□□□ -1.66
HMGB3P11-201ENST00000440127 NCOA1Q15788 1441 aa4.65□□□□□ -1.66
HMGB3P11-201ENST00000440127 DENND4BO75064 1496 aaPredicted RBP4.65□□□□□ -1.66
HMGB3P11-201ENST00000440127 B2RBV5 119 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 CCER2I3L3R5 266 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 GJB6O95452 261 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 TSPY4P0CV99 314 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 TSPY10P0CW01 314 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 RPL13P26373 211 aaKnown RBP4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 ETFBP38117 255 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 BCL6P41182 706 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 PLP2Q04941 152 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 DDR2Q16832 855 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 SLC10A6Q3KNW5 377 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 STEAP3Q658P3 488 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 MBLAC2Q68D91 279 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 GIMAP6Q6P9H5 292 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 CKAP2LQ8IYA6 745 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 SYT8Q8NBV8 401 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 ST13P5Q8NFI4 369 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 ZNF669Q96BR6 464 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 ARMC5Q96C12 935 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 CLIC6Q96NY7 704 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 TMEM209Q96SK2 561 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 DNAJC2Q99543 621 aaKnown RBP4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 ZFYVE21Q9BQ24 234 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 HIRIP3Q9BW71 556 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 GPR27Q9NS67 375 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 CLDND1Q9NY35 253 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 FBLN5Q9UBX5 448 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 PCDHA2Q9Y5H9 948 aa4.65□□□□□ -1.67
HMGB3P11-201ENST00000440127 KDM6BO15054 1643 aa4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 ADCY10Q96PN6 1610 aa4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 ITSN2Q9NZM3 1697 aa4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 ADGRL2O95490 1459 aa4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 ABCC10Q5T3U5 1492 aa4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 K7ESM1 405 aa4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 ANP32CO43423 234 aa4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 C8BP07358 591 aa4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 CDK11BP21127 795 aaKnown RBP4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 FPR2P25090 351 aa4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 THBS2P35442 1172 aa4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 SURF1Q15526 300 aa4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 ZNF827Q17R98 1081 aa4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 INF2Q27J81 1249 aa4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 EMC4Q5J8M3 183 aa4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 ANKS3Q6ZW76 656 aa4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 PRRT2Q7Z6L0 340 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 MCF2L2Q86YR7 1114 aa4.64□□□□□ -1.67
HMGB3P11-201ENST00000440127 LGI4Q8N135 537 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms