RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 NDUFB10O96000 172 aa13.43□□□□□ -0.26
HDAC8-214ENST00000439122 POTEIP0CG38 1075 aa13.43□□□□□ -0.26
HDAC8-214ENST00000439122 KIF11P52732 1056 aa13.43□□□□□ -0.26
HDAC8-214ENST00000439122 VSNL1P62760 191 aa13.43□□□□□ -0.26
HDAC8-214ENST00000439122 FKBP1AP62942 108 aaKnown RBP13.43□□□□□ -0.26
HDAC8-214ENST00000439122 AOC3Q16853 763 aa13.43□□□□□ -0.26
HDAC8-214ENST00000439122 BEND6Q5SZJ8 279 aaPredicted RBP13.43□□□□□ -0.26
HDAC8-214ENST00000439122 PAPD7Q5XG87 772 aaKnown RBP13.43□□□□□ -0.26
HDAC8-214ENST00000439122 HAUS3Q68CZ6 603 aa13.43□□□□□ -0.26
HDAC8-214ENST00000439122 POTEGQ6S5H5 508 aa13.43□□□□□ -0.26
HDAC8-214ENST00000439122 POTEEQ6S8J3 1075 aa13.43□□□□□ -0.26
HDAC8-214ENST00000439122 FBXO11Q86XK2 927 aa13.43□□□□□ -0.26
HDAC8-214ENST00000439122 SMCR8Q8TEV9 937 aaPredicted RBP13.43□□□□□ -0.26
HDAC8-214ENST00000439122 P2RX7Q99572 595 aaKnown RBP13.43□□□□□ -0.26
HDAC8-214ENST00000439122 JADE2Q9NQC1 790 aa13.43□□□□□ -0.26
HDAC8-214ENST00000439122 PLSCR1O15162 318 aa13.42□□□□□ -0.26
HDAC8-214ENST00000439122 AKR1B10O60218 316 aa13.42□□□□□ -0.26
HDAC8-214ENST00000439122 USO1O60763 962 aaKnown RBP13.42□□□□□ -0.26
HDAC8-214ENST00000439122 CYP11B2P19099 503 aa13.42□□□□□ -0.26
HDAC8-214ENST00000439122 OAS2P29728 719 aaKnown RBP13.42□□□□□ -0.26
HDAC8-214ENST00000439122 EIF4A3P38919 411 aaKnown RBP13.42□□□□□ -0.26
HDAC8-214ENST00000439122 FOXR2Q6PJQ5 311 aa13.42□□□□□ -0.26
HDAC8-214ENST00000439122 ABCB6Q9NP58 842 aa13.42□□□□□ -0.26
HDAC8-214ENST00000439122 PCDHA13Q9Y5I0 950 aa13.42□□□□□ -0.26
HDAC8-214ENST00000439122 GH2P01242 217 aa13.42□□□□□ -0.26
HDAC8-214ENST00000439122 TAL1P17542 331 aaPredicted RBP13.42□□□□□ -0.26
HDAC8-214ENST00000439122 CHRNA5P30532 468 aa13.42□□□□□ -0.26
HDAC8-214ENST00000439122 SYDE2Q5VT97 1194 aa13.42□□□□□ -0.26
HDAC8-214ENST00000439122 GMCL1P1Q8NEA9 526 aa13.42□□□□□ -0.26
HDAC8-214ENST00000439122 MMS19Q96T76 1030 aa13.42□□□□□ -0.26
HDAC8-214ENST00000439122 RNF216Q9NWF9 866 aaPredicted RBP13.42□□□□□ -0.26
HDAC8-214ENST00000439122 PCDHA2Q9Y5H9 948 aa13.42□□□□□ -0.26
HDAC8-214ENST00000439122 MEIS1O00470 390 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 SLC12A3P55017 1021 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 RBM26Q5T8P6 1007 aaKnown RBP13.41□□□□□ -0.26
HDAC8-214ENST00000439122 MOXD1Q6UVY6 613 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 HDXQ7Z353 690 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 CATSPER3Q86XQ3 398 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 SPICE1Q8N0Z3 855 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 ETNPPLQ8TBG4 499 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 CAGE1Q8TC20 777 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 SCFD1Q8WVM8 642 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 BAP1Q92560 729 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 GMCL1Q96IK5 515 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 MBOAT7Q96N66 472 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 PURBQ96QR8 312 aaKnown RBP13.41□□□□□ -0.26
HDAC8-214ENST00000439122 UBXN6Q9BZV1 441 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 ZCCHC17Q9NP64 241 aaKnown RBP13.41□□□□□ -0.26
HDAC8-214ENST00000439122 EMILIN3Q9NT22 766 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 FAM86B1E9PN63 330 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 NPM3O75607 178 aaKnown RBP13.41□□□□□ -0.26
HDAC8-214ENST00000439122 FAM86B2P0C5J1 330 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 BMP3P12645 472 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 HOXA13P31271 388 aaPredicted RBP13.41□□□□□ -0.26
HDAC8-214ENST00000439122 KCNMA1Q12791 1236 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 PABPC4Q13310 644 aaKnown RBP eCLIP13.41□□□□□ -0.26
HDAC8-214ENST00000439122 ARSHQ5FYA8 562 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 STYK1Q6J9G0 422 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 ERMNQ8TAM6 284 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 CRYGNQ8WXF5 182 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 CEP63Q96MT8 703 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 CSRNP1Q96S65 589 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 SUGCTQ9HAC7 445 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 NLRC4Q9NPP4 1024 aa13.41□□□□□ -0.26
HDAC8-214ENST00000439122 ANO9A1A5B4 782 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 MAP2K7O14733 419 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 ZNF185O15231 689 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 GNA14O95837 355 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 TUBBP07437 444 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 PSMC6P62333 389 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 JAG1P78504 1218 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 CKAP4Q07065 602 aaKnown RBP13.4□□□□□ -0.26
HDAC8-214ENST00000439122 SPIRE1Q08AE8 756 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 Q4G0T1 1027 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 TRIM58Q8NG06 486 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 ZBTB9Q96C00 473 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 PRMT6Q96LA8 375 aaPredicted RBP13.4□□□□□ -0.26
HDAC8-214ENST00000439122 DRC1Q96MC2 740 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 CRACR2AQ9BSW2 395 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 GBP3Q9H0R5 595 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 DNM3Q9UQ16 869 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.4□□□□□ -0.26
HDAC8-214ENST00000439122 SLX4Q8IY92 1834 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 SLC26A4O43511 780 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 SREBF1P36956 1147 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 ADAM9Q13443 819 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 TDRD12Q587J7 1177 aaKnown RBP13.4□□□□□ -0.26
HDAC8-214ENST00000439122 MCTP2Q6DN12 878 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 PDXDC1Q6P996 788 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 FBXO41Q8TF61 875 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 LENG9Q96B70 501 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 KCTD10Q9H3F6 313 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 SH2D4AQ9H788 454 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 MLXIPQ9HAP2 919 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 L1RE1Q9UN81 338 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 CAPN6Q9Y6Q1 641 aa13.4□□□□□ -0.26
HDAC8-214ENST00000439122 PITPNM2Q9BZ72 1349 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 TBX3O15119 743 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 TACC1O75410 805 aa13.39□□□□□ -0.27
HDAC8-214ENST00000439122 MOCS3O95396 460 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms