RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 FUT8Q9BYC5 575 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 GGA3Q9NZ52 723 aa15.44■□□□□ 0.06
PTCHD3-201ENST00000438700 OPLAHO14841 1288 aa15.43■□□□□ 0.06
PTCHD3-201ENST00000438700 CCNE1P24864 410 aa15.43■□□□□ 0.06
PTCHD3-201ENST00000438700 SV2BQ7L1I2 683 aa15.43■□□□□ 0.06
PTCHD3-201ENST00000438700 ZNF507Q8TCN5 953 aa15.43■□□□□ 0.06
PTCHD3-201ENST00000438700 SNX29Q8TEQ0 813 aa15.43■□□□□ 0.06
PTCHD3-201ENST00000438700 LARP4BQ92615 738 aaKnown RBP15.43■□□□□ 0.06
PTCHD3-201ENST00000438700 CNOT6LQ96LI5 555 aaKnown RBP15.43■□□□□ 0.06
PTCHD3-201ENST00000438700 PNMA5Q96PV4 448 aa15.43■□□□□ 0.06
PTCHD3-201ENST00000438700 DDX25Q9UHL0 483 aaKnown RBP15.43■□□□□ 0.06
PTCHD3-201ENST00000438700 DOCK1Q14185 1865 aa15.43■□□□□ 0.06
PTCHD3-201ENST00000438700 MYMKA6NI61 221 aa15.43■□□□□ 0.06
PTCHD3-201ENST00000438700 KLK7P49862 253 aa15.43■□□□□ 0.06
PTCHD3-201ENST00000438700 FXR2P51116 673 aaKnown RBP eCLIP15.43■□□□□ 0.06
PTCHD3-201ENST00000438700 AP3B2Q13367 1082 aa15.43■□□□□ 0.06
PTCHD3-201ENST00000438700 RSRC2Q7L4I2 434 aaKnown RBP15.43■□□□□ 0.06
PTCHD3-201ENST00000438700 SYT17Q9BSW7 474 aa15.43■□□□□ 0.06
PTCHD3-201ENST00000438700 RANBP17Q9H2T7 1088 aaKnown RBP15.43■□□□□ 0.06
PTCHD3-201ENST00000438700 BICDL2A1A5D9 508 aa15.42■□□□□ 0.06
PTCHD3-201ENST00000438700 IDEP14735 1019 aa15.42■□□□□ 0.06
PTCHD3-201ENST00000438700 HIRAP54198 1017 aaPredicted RBP15.42■□□□□ 0.06
PTCHD3-201ENST00000438700 DGKZQ13574 1117 aa15.42■□□□□ 0.06
PTCHD3-201ENST00000438700 DCAF15Q66K64 600 aa15.42■□□□□ 0.06
PTCHD3-201ENST00000438700 KCNK18Q7Z418 384 aa15.42■□□□□ 0.06
PTCHD3-201ENST00000438700 FAM160B2Q86V87 743 aa15.42■□□□□ 0.06
PTCHD3-201ENST00000438700 FEM1BQ9UK73 627 aa15.42■□□□□ 0.06
PTCHD3-201ENST00000438700 FZD1Q9UP38 647 aa15.42■□□□□ 0.06
PTCHD3-201ENST00000438700 LUC7L2Q9Y383 392 aaKnown RBP15.42■□□□□ 0.06
PTCHD3-201ENST00000438700 GCFC2P16383 781 aaKnown RBP15.42■□□□□ 0.06
PTCHD3-201ENST00000438700 ERCC3P19447 782 aa15.42■□□□□ 0.06
PTCHD3-201ENST00000438700 TRIM21P19474 475 aaKnown RBP15.42■□□□□ 0.06
PTCHD3-201ENST00000438700 HOXA13P31271 388 aaPredicted RBP15.42■□□□□ 0.06
PTCHD3-201ENST00000438700 ZSCAN26Q16670 478 aa15.42■□□□□ 0.06
PTCHD3-201ENST00000438700 CNNM4Q6P4Q7 775 aa15.42■□□□□ 0.06
PTCHD3-201ENST00000438700 GPR161Q8N6U8 529 aaKnown RBP15.42■□□□□ 0.06
PTCHD3-201ENST00000438700 SUGCTQ9HAC7 445 aa15.42■□□□□ 0.06
PTCHD3-201ENST00000438700 ARFGAP3Q9NP61 516 aa15.42■□□□□ 0.06
PTCHD3-201ENST00000438700 RNF181Q9P0P0 153 aa15.42■□□□□ 0.06
PTCHD3-201ENST00000438700 POLR2AP24928 1970 aaKnown RBP15.42■□□□□ 0.06
PTCHD3-201ENST00000438700 MARCH6O60337 910 aa15.41■□□□□ 0.06
PTCHD3-201ENST00000438700 PLA2G6O60733 806 aa15.41■□□□□ 0.06
PTCHD3-201ENST00000438700 DDNO94850 711 aaPredicted RBP15.41■□□□□ 0.06
PTCHD3-201ENST00000438700 MTIF2P46199 727 aaKnown RBP15.41■□□□□ 0.06
PTCHD3-201ENST00000438700 SLC35F6Q8N357 371 aa15.41■□□□□ 0.06
PTCHD3-201ENST00000438700 RAB34Q9BZG1 259 aa15.41■□□□□ 0.06
PTCHD3-201ENST00000438700 GINM1Q9NU53 330 aa15.41■□□□□ 0.06
PTCHD3-201ENST00000438700 AGPAT5Q9NUQ2 364 aa15.41■□□□□ 0.06
PTCHD3-201ENST00000438700 PUF60Q9UHX1 559 aaKnown RBP15.41■□□□□ 0.06
PTCHD3-201ENST00000438700 ADAM21Q9UKJ8 722 aa15.41■□□□□ 0.06
PTCHD3-201ENST00000438700 YBX3P16989 372 aaKnown RBP eCLIP15.41■□□□□ 0.06
PTCHD3-201ENST00000438700 LMAN1P49257 510 aa15.41■□□□□ 0.06
PTCHD3-201ENST00000438700 DNM2P50570 870 aa15.41■□□□□ 0.06
PTCHD3-201ENST00000438700 TBC1D8BQ0IIM8 1120 aa15.41■□□□□ 0.06
PTCHD3-201ENST00000438700 ECM1Q16610 540 aa15.41■□□□□ 0.06
PTCHD3-201ENST00000438700 KRT79Q5XKE5 535 aa15.41■□□□□ 0.06
PTCHD3-201ENST00000438700 OR8K1Q8NGG5 319 aa15.41■□□□□ 0.06
PTCHD3-201ENST00000438700 PCMTD1Q96MG8 357 aaPredicted RBP15.41■□□□□ 0.06
PTCHD3-201ENST00000438700 WRNIP1Q96S55 665 aa15.41■□□□□ 0.06
PTCHD3-201ENST00000438700 KIAA1683Q9H0B3 1180 aa15.41■□□□□ 0.06
PTCHD3-201ENST00000438700 SEMA6BQ9H3T3 888 aa15.41■□□□□ 0.06
PTCHD3-201ENST00000438700 TRIM10Q9UDY6 481 aa15.41■□□□□ 0.06
PTCHD3-201ENST00000438700 A0A1W2PQC6 194 aa15.4■□□□□ 0.06
PTCHD3-201ENST00000438700 SPDYE3A6NKU9 549 aa15.4■□□□□ 0.06
PTCHD3-201ENST00000438700 USP11P51784 963 aa15.4■□□□□ 0.06
PTCHD3-201ENST00000438700 ARHGAP4P98171 946 aa15.4■□□□□ 0.06
PTCHD3-201ENST00000438700 LONRF2Q1L5Z9 754 aa15.4■□□□□ 0.06
PTCHD3-201ENST00000438700 C10orf67Q8IYJ2 551 aa15.4■□□□□ 0.06
PTCHD3-201ENST00000438700 TXLNBQ8N3L3 684 aa15.4■□□□□ 0.06
PTCHD3-201ENST00000438700 NOC3LQ8WTT2 800 aaKnown RBP15.4■□□□□ 0.06
PTCHD3-201ENST00000438700 HAS1Q92839 578 aa15.4■□□□□ 0.06
PTCHD3-201ENST00000438700 ZKSCAN4Q969J2 545 aaPredicted RBP15.4■□□□□ 0.06
PTCHD3-201ENST00000438700 NAP1L4Q99733 375 aaKnown RBP15.4■□□□□ 0.06
PTCHD3-201ENST00000438700 NOC4LQ9BVI4 516 aaKnown RBP15.4■□□□□ 0.06
PTCHD3-201ENST00000438700 STK17AQ9UEE5 414 aa15.4■□□□□ 0.06
PTCHD3-201ENST00000438700 TFR2Q9UP52 801 aa15.4■□□□□ 0.06
PTCHD3-201ENST00000438700 NDUFA10O95299 355 aa15.4■□□□□ 0.06
PTCHD3-201ENST00000438700 TRAF1Q13077 416 aa15.4■□□□□ 0.06
PTCHD3-201ENST00000438700 SEMA3FQ13275 785 aa15.4■□□□□ 0.06
PTCHD3-201ENST00000438700 MTMR2Q13614 643 aa15.4■□□□□ 0.06
PTCHD3-201ENST00000438700 GLIS3Q8NEA6 775 aa15.4■□□□□ 0.06
PTCHD3-201ENST00000438700 LPAR1Q92633 364 aa15.4■□□□□ 0.06
PTCHD3-201ENST00000438700 RAD54LQ92698 747 aa15.4■□□□□ 0.06
PTCHD3-201ENST00000438700 EPN1Q9Y6I3 576 aaPredicted RBP15.4■□□□□ 0.06
PTCHD3-201ENST00000438700 WDR46O15213 610 aaKnown RBP15.39■□□□□ 0.05
PTCHD3-201ENST00000438700 N4BP1O75113 896 aaKnown RBP15.39■□□□□ 0.05
PTCHD3-201ENST00000438700 FOSP01100 380 aaPredicted RBP15.39■□□□□ 0.05
PTCHD3-201ENST00000438700 ARHGAP25P42331 645 aa15.39■□□□□ 0.05
PTCHD3-201ENST00000438700 MIIPQ5JXC2 388 aa15.39■□□□□ 0.05
PTCHD3-201ENST00000438700 MCTP2Q6DN12 878 aa15.39■□□□□ 0.05
PTCHD3-201ENST00000438700 WDR59Q6PJI9 974 aa15.39■□□□□ 0.05
PTCHD3-201ENST00000438700 SCYL3Q8IZE3 742 aa15.39■□□□□ 0.05
PTCHD3-201ENST00000438700 CRYGNQ8WXF5 182 aa15.39■□□□□ 0.05
PTCHD3-201ENST00000438700 DDX12PQ92771 950 aa15.39■□□□□ 0.05
PTCHD3-201ENST00000438700 HOOK2Q96ED9 719 aa15.39■□□□□ 0.05
PTCHD3-201ENST00000438700 DNAJC7Q99615 494 aa15.39■□□□□ 0.05
PTCHD3-201ENST00000438700 ZNF112Q9UJU3 913 aa15.39■□□□□ 0.05
PTCHD3-201ENST00000438700 CAPN11Q9UMQ6 739 aa15.39■□□□□ 0.05
PTCHD3-201ENST00000438700 REXO2Q9Y3B8 237 aaKnown RBP15.39■□□□□ 0.05
PTCHD3-201ENST00000438700 CFBP00751 764 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms