RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 DYMQ7RTS9 669 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 ARHGEF25Q86VW2 580 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 NLRP14Q86W24 1093 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 CFAP36Q96G28 342 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 CNOT6LQ96LI5 555 aaKnown RBP12.4□□□□□ -0.42
PTCH1-209ENST00000437951 ZC3H12CQ9C0D7 883 aaKnown RBP12.4□□□□□ -0.42
PTCH1-209ENST00000437951 PPARGC1AQ9UBK2 798 aaKnown RBP12.4□□□□□ -0.42
PTCH1-209ENST00000437951 FBXO2Q9UK22 296 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-209ENST00000437951 SPDYE16A6NNV3 312 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-209ENST00000437951 B4E1Z4 1266 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 SPDYE2Q495Y8 402 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 SPOPLQ6IQ16 392 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 OPTNQ96CV9 577 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 RWDD2AQ9UIY3 292 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 RXRAP19793 462 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 PTPREP23469 700 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 PSMD2Q13200 908 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 KPNB1Q14974 876 aaKnown RBP12.4□□□□□ -0.42
PTCH1-209ENST00000437951 CAPN12Q6ZSI9 719 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 XAGE3Q8WTP9 111 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 PYROXD1Q8WU10 500 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 PLEKHA4Q9H4M7 779 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 SENP1Q9P0U3 644 aa12.4□□□□□ -0.42
PTCH1-209ENST00000437951 CAB39Q9Y376 341 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-209ENST00000437951 COPEO14579 308 aa12.4□□□□□ -0.43
PTCH1-209ENST00000437951 SEMA3EO15041 775 aa12.4□□□□□ -0.43
PTCH1-209ENST00000437951 GAP43P17677 238 aa12.4□□□□□ -0.43
PTCH1-209ENST00000437951 EFTUD2Q15029 972 aaKnown RBP eCLIP12.4□□□□□ -0.43
PTCH1-209ENST00000437951 AGGF1Q8N302 714 aaeCLIP12.4□□□□□ -0.43
PTCH1-209ENST00000437951 NCLNQ969V3 563 aa12.4□□□□□ -0.43
PTCH1-209ENST00000437951 CMTM5Q96DZ9 223 aa12.4□□□□□ -0.43
PTCH1-209ENST00000437951 MBD4O95243 580 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 SRGAP2CP0DJJ0 459 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 ITKQ08881 620 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 INPP5AQ14642 412 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 PUM3Q15397 648 aaKnown RBP12.39□□□□□ -0.43
PTCH1-209ENST00000437951 HDDC2Q7Z4H3 204 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 EYA3Q99504 573 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 ZNF263O14978 683 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 ST13P50502 369 aaKnown RBP12.39□□□□□ -0.43
PTCH1-209ENST00000437951 IFRD2Q12894 506 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-209ENST00000437951 MAN2A1Q16706 1144 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 SCYL2Q6P3W7 929 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 KRT26Q7Z3Y9 468 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 TESK2Q96S53 571 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 BLZF1Q9H2G9 400 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 THAP9Q9H5L6 903 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 CDC37Q16543 378 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-209ENST00000437951 DNAL1Q4LDG9 190 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 CASP10Q92851 521 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 CHMP6Q96FZ7 201 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 DCDC2Q9UHG0 476 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 TYW5A2RUC4 315 aaKnown RBP12.39□□□□□ -0.43
PTCH1-209ENST00000437951 GOLGA8FQ08AF8 430 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 GOLGA8DPQ0D2H9 430 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 RHOT2Q8IXI1 618 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 GPT2Q8TD30 523 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 LSG1Q9H089 658 aaKnown RBP12.39□□□□□ -0.43
PTCH1-209ENST00000437951 ZMYND8Q9ULU4 1186 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-209ENST00000437951 EMILIN1Q9Y6C2 1016 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 CTTNBP2Q8WZ74 1663 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 MRPS25P82663 173 aaKnown RBP12.39□□□□□ -0.43
PTCH1-209ENST00000437951 TMPRSS15P98073 1019 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 TBCCQ15814 346 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 RASSF3Q86WH2 238 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 VPS39Q96JC1 886 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 VIPAS39Q9H9C1 493 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 DONSONQ9NYP3 566 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 MBD2Q9UBB5 411 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 SEC24BO95487 1268 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 KRT7P08729 469 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 ADAM9Q13443 819 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 SRLQ86TD4 932 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 SKA2Q8WVK7 121 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-209ENST00000437951 BRD8Q9H0E9 1235 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 TBC1D7Q9P0N9 293 aa12.39□□□□□ -0.43
PTCH1-209ENST00000437951 GOLGA8IPA6NC78 632 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 PFKFB2O60825 505 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 CYTH1Q15438 398 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 ZBTB8OSQ8IWT0 167 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 MIGA1Q8NAN2 632 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 PLEKHM3Q6ZWE6 761 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 AFAP1Q8N556 730 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 DDI1Q8WTU0 396 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 GOLPH3LQ9H4A5 285 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 CCDC134Q9H6E4 229 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 ANO9A1A5B4 782 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 TJP3O95049 919 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 ZBED6P86452 979 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 RBL2Q08999 1139 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 NME9Q86XW9 330 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 VSTM4Q8IW00 320 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 NELFCDQ8IXH7 590 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 SCG3Q8WXD2 468 aaKnown RBP12.38□□□□□ -0.43
PTCH1-209ENST00000437951 PGBD1Q96JS3 809 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 ST7Q9NRC1 585 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 CFAP43Q8NDM7 1665 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 NFKBIAP25963 317 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 PIK3CAP42336 1068 aa12.38□□□□□ -0.43
PTCH1-209ENST00000437951 ZBTB41Q5SVQ8 909 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms