RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 AGERQ15109 404 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 SF3A1Q15459 793 aaKnown RBP8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 TKFCQ3LXA3 575 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 TTC38Q5R3I4 469 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 MCTP2Q6DN12 878 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 CYP4F22Q6NT55 531 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 MCF2L2Q86YR7 1114 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 RIOX2Q8IUF8 465 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 ZNF511Q8NB15 262 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 TMEM87AQ8NBN3 555 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 LINC00301Q8NCQ3 95 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 TBCKQ8TEA7 893 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 CRYGNQ8WXF5 182 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 MOV10L1Q9BXT6 1211 aaKnown RBP8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 SCAND2PQ9GZW5 306 aaPredicted RBP8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 SPATC1LQ9H0A9 340 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 RNF146Q9NTX7 359 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 LMBRD1Q9NUN5 540 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 COL20A1Q9P218 1284 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 PCDH10Q9P2E7 1040 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 NOL7Q9UMY1 257 aaKnown RBP8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 RABGAP1Q9Y3P9 1069 aa8.01□□□□□ -1.13
LSM3P3-201ENST00000436601 RASSF10A6NK89 507 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 YEATS4O95619 227 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 FOSP01100 380 aaPredicted RBP8□□□□□ -1.13
LSM3P3-201ENST00000436601 TM4SF4P48230 202 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 INHBEP58166 350 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 USP4Q13107 963 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 AP3B2Q13367 1082 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 BAATQ14032 418 aaPredicted RBP8□□□□□ -1.13
LSM3P3-201ENST00000436601 SLC39A14Q15043 492 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 ZNF174Q15697 407 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 DEFB115Q30KQ5 88 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 SLC30A10Q6XR72 485 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 RNF207Q6ZRF8 634 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 NEK8Q86SG6 692 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 FCHSD1Q86WN1 690 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 TRMT44Q8IYL2 757 aaKnown RBP8□□□□□ -1.13
LSM3P3-201ENST00000436601 SAMD3Q8N6K7 520 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 C4orf32Q8N8J7 132 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 CHST13Q8NET6 341 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 SYTL5Q8TDW5 730 aaPredicted RBP8□□□□□ -1.13
LSM3P3-201ENST00000436601 BAP1Q92560 729 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 SPATA32Q96LK8 384 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 PAGR1Q9BTK6 254 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 C1QTNF2Q9BXJ5 285 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 ANO3Q9BYT9 981 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 ZCCHC17Q9NP64 241 aaKnown RBP8□□□□□ -1.13
LSM3P3-201ENST00000436601 MAP3K20Q9NYL2 800 aaKnown RBP8□□□□□ -1.13
LSM3P3-201ENST00000436601 MORF4L1Q9UBU8 362 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 MRVI1Q9Y6F6 885 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 ELP1O95163 1332 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 ADGRA2Q96PE1 1338 aa8□□□□□ -1.13
LSM3P3-201ENST00000436601 LOC285556D6RIA3 1793 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 RBM47A0AV96 593 aaKnown RBP7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 SPDYE3A6NKU9 549 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 ESPNB1AK53 854 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 SPTLC2O15270 562 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 GADD45BO75293 160 aaPredicted RBP7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 SLC25A27O95847 323 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 MCM7P33993 719 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 SREBF1P36956 1147 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 GCLCP48506 637 aaPredicted RBP7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 USP11P51784 963 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 RPS6P62753 249 aaKnown RBP7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 ERVK-9P63128 1117 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 ERVK-24P63145 666 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 ARHGAP4P98171 946 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 GRM1Q13255 1194 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 STK38Q15208 465 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 LETM2Q2VYF4 491 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 TJAP1Q5JTD0 557 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 LCE2DQ5TA82 110 aaPredicted RBP7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 NSMFQ6X4W1 530 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 ANKRD13CQ8N6S4 541 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 GPRC5AQ8NFJ5 357 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 SMCR8Q8TEV9 937 aaPredicted RBP7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 GTF3C2Q8WUA4 911 aaPredicted RBP7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 KCTD12Q96CX2 325 aaKnown RBP7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 CAPNS2Q96L46 248 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 PURBQ96QR8 312 aaKnown RBP7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 TAAR1Q96RJ0 339 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 PARK7Q99497 189 aaKnown RBP7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 MAF1Q9H063 256 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 ACAD9Q9H845 621 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 A1CFQ9NQ94 594 aaKnown RBP7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 CYP39A1Q9NYL5 469 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 EGFL7Q9UHF1 273 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 PCDHA7Q9UN72 937 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 KIAA1024Q9UPX6 916 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 RPTORQ8N122 1335 aa7.99□□□□□ -1.13
LSM3P3-201ENST00000436601 CYP3A7-CYP3A51PA0A087WV96 503 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 GOLGA6L22H0YM25 854 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 CCNT1O60563 726 aaKnown RBP7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 AOC2O75106 756 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 PPP6R2O75170 966 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 TDP2O95551 362 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 CYP3A4P08684 503 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 CYP3A7P24462 503 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms