RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 CCDC84Q86UT8 332 aaPredicted RBP6.88□□□□□ -1.31
VRK2-206ENST00000435505 TRIM22Q8IYM9 498 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 CMTR2Q8IYT2 770 aaKnown RBP6.88□□□□□ -1.31
VRK2-206ENST00000435505 CCDC116Q8IYX3 515 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.88□□□□□ -1.31
VRK2-206ENST00000435505 OSBP2Q969R2 916 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 PRAM1Q96QH2 718 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 SLC6A16Q9GZN6 736 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 TNMDQ9H2S6 317 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 MRGBPQ9NV56 204 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 DNAI1Q9UI46 699 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 TMX2Q9Y320 296 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 SYNJ2O15056 1496 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 ADGRL1O94910 1474 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 ZC3H13Q5T200 1668 aaKnown RBP6.88□□□□□ -1.31
VRK2-206ENST00000435505 TTC41PQ6P2S7 1318 aa6.88□□□□□ -1.31
VRK2-206ENST00000435505 PTCH1Q13635 1447 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 BICDL2A1A5D9 508 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 SOWAHBA6NEL2 793 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 LRRC10BA6NIK2 292 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 PPEF1O14829 653 aaPredicted RBP6.87□□□□□ -1.31
VRK2-206ENST00000435505 IPO8O15397 1037 aaKnown RBP6.87□□□□□ -1.31
VRK2-206ENST00000435505 AP1G1O43747 822 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 URI1O94763 535 aaPredicted RBP6.87□□□□□ -1.31
VRK2-206ENST00000435505 CD4P01730 458 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 IFIT1P09914 478 aaKnown RBP6.87□□□□□ -1.31
VRK2-206ENST00000435505 IREB2P48200 963 aaKnown RBP6.87□□□□□ -1.31
VRK2-206ENST00000435505 IER5Q5VY09 327 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 NCAPG2Q86XI2 1143 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 SLC35G2Q8TBE7 412 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 TMEM40Q8WWA1 233 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 HSPBAP1Q96EW2 488 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 THOC1Q96FV9 657 aaKnown RBP6.87□□□□□ -1.31
VRK2-206ENST00000435505 ZSCAN10Q96SZ4 725 aaPredicted RBP6.87□□□□□ -1.31
VRK2-206ENST00000435505 OSMRQ99650 979 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 TACO1Q9BSH4 297 aaKnown RBP6.87□□□□□ -1.31
VRK2-206ENST00000435505 VEZTQ9HBM0 779 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 A1CFQ9NQ94 594 aaKnown RBP6.87□□□□□ -1.31
VRK2-206ENST00000435505 SMYD2Q9NRG4 433 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 IRAK4Q9NWZ3 460 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 HMGXB3Q12766 1538 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 ARHGEF40Q8TER5 1519 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 PIK3R4Q99570 1358 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 FANCAO15360 1455 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 HAX1O00165 279 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 EYA2O00167 538 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 PRODHO43272 600 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 S1PR4O95977 384 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 SOD2P04179 222 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 GRM1Q13255 1194 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 G3BP1Q13283 466 aaKnown RBP eCLIP6.87□□□□□ -1.31
VRK2-206ENST00000435505 LRRFIP1Q32MZ4 808 aaKnown RBP6.87□□□□□ -1.31
VRK2-206ENST00000435505 WDR45BQ5MNZ6 344 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 AP1ARQ63HQ0 302 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 OVOS1Q6IE37 1185 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 ABHD17CQ6PCB6 329 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 C11orf57Q6ZUT1 292 aaPredicted RBP6.87□□□□□ -1.31
VRK2-206ENST00000435505 TBC1D1Q86TI0 1168 aaPredicted RBP6.87□□□□□ -1.31
VRK2-206ENST00000435505 FAM26EQ8N5C1 309 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 GPR161Q8N6U8 529 aaKnown RBP6.87□□□□□ -1.31
VRK2-206ENST00000435505 ZNF516Q92618 1163 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 TBCBQ99426 244 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 PARD6BQ9BYG5 372 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 TRIM6Q9C030 488 aaPredicted RBP6.87□□□□□ -1.31
VRK2-206ENST00000435505 CD248Q9HCU0 757 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 DACT1Q9NYF0 836 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 APEX2Q9UBZ4 518 aa6.87□□□□□ -1.31
VRK2-206ENST00000435505 MEIS3P2A8K0S8 358 aa6.86□□□□□ -1.31
VRK2-206ENST00000435505 CTAGE5O15320 804 aa6.86□□□□□ -1.31
VRK2-206ENST00000435505 POLR2BP30876 1174 aaKnown RBP6.86□□□□□ -1.31
VRK2-206ENST00000435505 RECQLP46063 649 aaPredicted RBP6.86□□□□□ -1.31
VRK2-206ENST00000435505 ADCY2Q08462 1091 aa6.86□□□□□ -1.31
VRK2-206ENST00000435505 SKIDA1Q1XH10 827 aa6.86□□□□□ -1.31
VRK2-206ENST00000435505 CCDC92Q53HC0 331 aaPredicted RBP6.86□□□□□ -1.31
VRK2-206ENST00000435505 TRIM61Q5EBN2 209 aa6.86□□□□□ -1.31
VRK2-206ENST00000435505 PIK3R6Q5UE93 754 aa6.86□□□□□ -1.31
VRK2-206ENST00000435505 TMEM214Q6NUQ4 689 aaKnown RBP6.86□□□□□ -1.31
VRK2-206ENST00000435505 RBM43Q6ZSC3 357 aaKnown RBP6.86□□□□□ -1.31
VRK2-206ENST00000435505 CHST15Q7LFX5 561 aaPredicted RBP6.86□□□□□ -1.31
VRK2-206ENST00000435505 KRT25Q7Z3Z0 450 aa6.86□□□□□ -1.31
VRK2-206ENST00000435505 FCHSD1Q86WN1 690 aa6.86□□□□□ -1.31
VRK2-206ENST00000435505 SCUBE1Q8IWY4 988 aa6.86□□□□□ -1.31
VRK2-206ENST00000435505 MYCT1Q8N699 235 aa6.86□□□□□ -1.31
VRK2-206ENST00000435505 FAM156AQ8NDB6 213 aa6.86□□□□□ -1.31
VRK2-206ENST00000435505 C1orf162Q8NEQ5 155 aaPredicted RBP6.86□□□□□ -1.31
VRK2-206ENST00000435505 CTCFLQ8NI51 663 aaPredicted RBP6.86□□□□□ -1.31
VRK2-206ENST00000435505 ZNF483Q8TF39 744 aaPredicted RBP6.86□□□□□ -1.31
VRK2-206ENST00000435505 AGBL1Q96MI9 1066 aa6.86□□□□□ -1.31
VRK2-206ENST00000435505 AARSD1Q9BTE6 412 aaKnown RBP6.86□□□□□ -1.31
VRK2-206ENST00000435505 SLC13A1Q9BZW2 595 aa6.86□□□□□ -1.31
VRK2-206ENST00000435505 TRMT13Q9NUP7 481 aaKnown RBP6.86□□□□□ -1.31
VRK2-206ENST00000435505 PGAP2Q9UHJ9 254 aa6.86□□□□□ -1.31
VRK2-206ENST00000435505 GIT1Q9Y2X7 761 aa6.86□□□□□ -1.31
VRK2-206ENST00000435505 SOS1Q07889 1333 aaPredicted RBP6.86□□□□□ -1.31
VRK2-206ENST00000435505 C9orf84Q5VXU9 1444 aa6.86□□□□□ -1.31
VRK2-206ENST00000435505 TTC37Q6PGP7 1564 aa6.86□□□□□ -1.31
VRK2-206ENST00000435505 FRMD3A2A2Y4 597 aa6.86□□□□□ -1.31
VRK2-206ENST00000435505 GFPT2O94808 682 aa6.86□□□□□ -1.31
VRK2-206ENST00000435505 IL33O95760 270 aa6.86□□□□□ -1.31
VRK2-206ENST00000435505 PABPC1P11940 636 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms