RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 ARHGAP6O43182 974 aa21.78■■□□□ 1.08
VRK2-205ENST00000432057 MFAP3LO75121 409 aa21.78■■□□□ 1.08
VRK2-205ENST00000432057 UBXN1Q04323 297 aa21.78■■□□□ 1.08
VRK2-205ENST00000432057 CEP55Q53EZ4 464 aa21.78■■□□□ 1.08
VRK2-205ENST00000432057 MUM1L1Q5H9M0 696 aa21.78■■□□□ 1.08
VRK2-205ENST00000432057 EIF2AK1Q9BQI3 630 aaKnown RBP21.78■■□□□ 1.08
VRK2-205ENST00000432057 AS3MTQ9HBK9 375 aa21.78■■□□□ 1.08
VRK2-205ENST00000432057 STK24Q9Y6E0 443 aa21.78■■□□□ 1.08
VRK2-205ENST00000432057 PAPPA2Q9BXP8 1791 aa21.78■■□□□ 1.08
VRK2-205ENST00000432057 STX10O60499 249 aa21.77■■□□□ 1.08
VRK2-205ENST00000432057 PSMD10O75832 226 aa21.77■■□□□ 1.08
VRK2-205ENST00000432057 CASP14P31944 242 aa21.77■■□□□ 1.08
VRK2-205ENST00000432057 BACE1P56817 501 aa21.77■■□□□ 1.08
VRK2-205ENST00000432057 PABPC4Q13310 644 aaKnown RBP eCLIP21.77■■□□□ 1.08
VRK2-205ENST00000432057 ARSHQ5FYA8 562 aa21.77■■□□□ 1.08
VRK2-205ENST00000432057 FAM26FQ5R3K3 315 aa21.77■■□□□ 1.08
VRK2-205ENST00000432057 FAM114A1Q8IWE2 563 aa21.77■■□□□ 1.08
VRK2-205ENST00000432057 ZNF280CQ8ND82 737 aa21.77■■□□□ 1.08
VRK2-205ENST00000432057 PANX2Q96RD6 677 aa21.77■■□□□ 1.08
VRK2-205ENST00000432057 FGFBP2Q9BYJ0 223 aa21.77■■□□□ 1.08
VRK2-205ENST00000432057 RPTORQ8N122 1335 aa21.77■■□□□ 1.08
VRK2-205ENST00000432057 MYH11P35749 1972 aa21.77■■□□□ 1.08
VRK2-205ENST00000432057 PES1O00541 588 aaKnown RBP21.77■■□□□ 1.08
VRK2-205ENST00000432057 CHMP2AO43633 222 aa21.77■■□□□ 1.08
VRK2-205ENST00000432057 KRT18P05783 430 aaKnown RBP21.77■■□□□ 1.08
VRK2-205ENST00000432057 ARP10275 920 aa21.77■■□□□ 1.08
VRK2-205ENST00000432057 FXR1P51114 621 aaKnown RBP eCLIP21.77■■□□□ 1.08
VRK2-205ENST00000432057 CCDC65Q8IXS2 484 aa21.77■■□□□ 1.08
VRK2-205ENST00000432057 MYRIPQ8NFW9 859 aa21.77■■□□□ 1.08
VRK2-205ENST00000432057 POLR3CQ9BUI4 534 aaPredicted RBP21.77■■□□□ 1.08
VRK2-205ENST00000432057 TBC1D7Q9P0N9 293 aa21.77■■□□□ 1.08
VRK2-205ENST00000432057 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.77■■□□□ 1.08
VRK2-205ENST00000432057 DNM3Q9UQ16 869 aa21.77■■□□□ 1.08
VRK2-205ENST00000432057 PRKCSHP14314 528 aaPredicted RBP21.76■■□□□ 1.07
VRK2-205ENST00000432057 HOXA7P31268 230 aaPredicted RBP21.76■■□□□ 1.07
VRK2-205ENST00000432057 OTOP1Q7RTM1 612 aa21.76■■□□□ 1.07
VRK2-205ENST00000432057 IL31RAQ8NI17 732 aa21.76■■□□□ 1.07
VRK2-205ENST00000432057 WNK4Q96J92 1243 aa21.76■■□□□ 1.07
VRK2-205ENST00000432057 TUBGCP2Q9BSJ2 902 aa21.76■■□□□ 1.07
VRK2-205ENST00000432057 RGL1Q9NZL6 768 aa21.76■■□□□ 1.07
VRK2-205ENST00000432057 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.76■■□□□ 1.071e-7■■□□□ 12.2
VRK2-205ENST00000432057 GAS7O60861 476 aa21.75■■□□□ 1.07
VRK2-205ENST00000432057 MTIF2P46199 727 aaKnown RBP21.75■■□□□ 1.07
VRK2-205ENST00000432057 SETQ01105 290 aaPredicted RBP21.75■■□□□ 1.07
VRK2-205ENST00000432057 PPP2R5CQ13362 524 aa21.75■■□□□ 1.07
VRK2-205ENST00000432057 MCF2L2Q86YR7 1114 aa21.75■■□□□ 1.07
VRK2-205ENST00000432057 MYOCDQ8IZQ8 938 aa21.75■■□□□ 1.07
VRK2-205ENST00000432057 MB21D1Q8N884 522 aa21.75■■□□□ 1.07
VRK2-205ENST00000432057 ZNF507Q8TCN5 953 aa21.75■■□□□ 1.07
VRK2-205ENST00000432057 ZNF592Q92610 1267 aa21.75■■□□□ 1.07
VRK2-205ENST00000432057 ATG4CQ96DT6 458 aa21.75■■□□□ 1.07
VRK2-205ENST00000432057 CTDP1Q9Y5B0 961 aaPredicted RBP21.75■■□□□ 1.07
VRK2-205ENST00000432057 B4DLN1 442 aa21.75■■□□□ 1.07
VRK2-205ENST00000432057 ZBED4O75132 1171 aa21.75■■□□□ 1.07
VRK2-205ENST00000432057 HMGCS2P54868 508 aa21.75■■□□□ 1.07
VRK2-205ENST00000432057 GHRHRQ02643 423 aa21.75■■□□□ 1.07
VRK2-205ENST00000432057 SYT2Q8N9I0 419 aaPredicted RBP21.75■■□□□ 1.07
VRK2-205ENST00000432057 KLRG1Q96E93 195 aa21.75■■□□□ 1.07
VRK2-205ENST00000432057 ZNF577Q9BSK1 485 aa21.75■■□□□ 1.07
VRK2-205ENST00000432057 PCDHA2Q9Y5H9 948 aa21.75■■□□□ 1.07
VRK2-205ENST00000432057 PPP2R3BQ9Y5P8 575 aa21.75■■□□□ 1.07
VRK2-205ENST00000432057 ZHX2Q9Y6X8 837 aa21.75■■□□□ 1.07
VRK2-205ENST00000432057 PITPNM2Q9BZ72 1349 aa21.74■■□□□ 1.07
VRK2-205ENST00000432057 LOC285556D6RIA3 1793 aa21.74■■□□□ 1.07
VRK2-205ENST00000432057 FRMD3A2A2Y4 597 aa21.74■■□□□ 1.07
VRK2-205ENST00000432057 RIOK3O14730 519 aaKnown RBP21.74■■□□□ 1.07
VRK2-205ENST00000432057 NKRFO15226 690 aaKnown RBP eCLIP21.74■■□□□ 1.07
VRK2-205ENST00000432057 TPM1P09493 284 aa21.74■■□□□ 1.07
VRK2-205ENST00000432057 LRRC63Q05C16 580 aa21.74■■□□□ 1.07
VRK2-205ENST00000432057 CTTNQ14247 550 aaKnown RBP21.74■■□□□ 1.07
VRK2-205ENST00000432057 TOGARAM2Q6ZUX3 1019 aa21.74■■□□□ 1.07
VRK2-205ENST00000432057 CNGA4Q8IV77 575 aa21.74■■□□□ 1.07
VRK2-205ENST00000432057 DYDC2Q96IM9 177 aa21.74■■□□□ 1.07
VRK2-205ENST00000432057 MXRA8Q9BRK3 442 aa21.74■■□□□ 1.07
VRK2-205ENST00000432057 KIAA1217Q5T5P2 1943 aa21.74■■□□□ 1.07
VRK2-205ENST00000432057 RNF225M0QZC1 329 aaPredicted RBP21.73■■□□□ 1.07
VRK2-205ENST00000432057 CCP110O43303 1012 aa21.73■■□□□ 1.07
VRK2-205ENST00000432057 DDNO94850 711 aaPredicted RBP21.73■■□□□ 1.07
VRK2-205ENST00000432057 PRKG1Q13976 671 aa21.73■■□□□ 1.07
VRK2-205ENST00000432057 TRIM14Q14142 442 aa21.73■■□□□ 1.07
VRK2-205ENST00000432057 HERC4Q5GLZ8 1057 aaPredicted RBP21.73■■□□□ 1.07
VRK2-205ENST00000432057 SYT17Q9BSW7 474 aa21.73■■□□□ 1.07
VRK2-205ENST00000432057 UNC45AQ9H3U1 944 aa21.73■■□□□ 1.07
VRK2-205ENST00000432057 ZHX3Q9H4I2 956 aa21.73■■□□□ 1.07
VRK2-205ENST00000432057 RABGAP1Q9Y3P9 1069 aa21.73■■□□□ 1.07
VRK2-205ENST00000432057 WDR81Q562E7 1941 aa21.73■■□□□ 1.07
VRK2-205ENST00000432057 VWA5AO00534 786 aa21.73■■□□□ 1.07
VRK2-205ENST00000432057 ITGB5P18084 799 aa21.73■■□□□ 1.07
VRK2-205ENST00000432057 GIT2Q14161 759 aa21.73■■□□□ 1.07
VRK2-205ENST00000432057 MTF1Q14872 753 aa21.73■■□□□ 1.07
VRK2-205ENST00000432057 SYTL5Q8TDW5 730 aaPredicted RBP21.73■■□□□ 1.07
VRK2-205ENST00000432057 TSG101Q99816 390 aa21.73■■□□□ 1.07
VRK2-205ENST00000432057 HSD17B14Q9BPX1 270 aa21.73■■□□□ 1.07
VRK2-205ENST00000432057 REEP2Q9BRK0 252 aa21.73■■□□□ 1.07
VRK2-205ENST00000432057 BHMT2Q9H2M3 363 aa21.73■■□□□ 1.07
VRK2-205ENST00000432057 TUFT1Q9NNX1 390 aa21.73■■□□□ 1.07
VRK2-205ENST00000432057 PPP2R2CQ9Y2T4 447 aa21.73■■□□□ 1.07
VRK2-205ENST00000432057 A0A1W2PQC6 194 aa21.72■■□□□ 1.07
VRK2-205ENST00000432057 SOWAHDA6NJG2 315 aa21.72■■□□□ 1.07
VRK2-205ENST00000432057 EYA4O95677 639 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms