RNA–Protein interactions for RNA: ENST00000430374.5

SMARCAL1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-207ENST00000430374 ITGB3BPQ13352 177 aaPredicted RBP10.78□□□□□ -0.68
SMARCAL1-207ENST00000430374 SNX17Q15036 470 aa10.78□□□□□ -0.68
SMARCAL1-207ENST00000430374 PRR16Q569H4 304 aa10.78□□□□□ -0.68
SMARCAL1-207ENST00000430374 C1orf53Q5VUE5 145 aa10.78□□□□□ -0.68
SMARCAL1-207ENST00000430374 CYFIP1Q7L576 1253 aa10.78□□□□□ -0.68
SMARCAL1-207ENST00000430374 NOSTRINQ8IVI9 506 aa10.78□□□□□ -0.68
SMARCAL1-207ENST00000430374 NAP1L4Q99733 375 aaKnown RBP10.78□□□□□ -0.68
SMARCAL1-207ENST00000430374 BCAS3Q9H6U6 928 aa10.78□□□□□ -0.68
SMARCAL1-207ENST00000430374 MLXIPQ9HAP2 919 aa10.78□□□□□ -0.68
SMARCAL1-207ENST00000430374 ELP1O95163 1332 aa10.78□□□□□ -0.68
SMARCAL1-207ENST00000430374 KIF28PB7ZC32 967 aa10.77□□□□□ -0.69
SMARCAL1-207ENST00000430374 MSH4O15457 936 aa10.77□□□□□ -0.69
SMARCAL1-207ENST00000430374 DHX15O43143 795 aaKnown RBP10.77□□□□□ -0.69
SMARCAL1-207ENST00000430374 PDCP20941 246 aa10.77□□□□□ -0.69
SMARCAL1-207ENST00000430374 TRAPPC10P48553 1259 aa10.77□□□□□ -0.69
SMARCAL1-207ENST00000430374 DGKDQ16760 1214 aa10.77□□□□□ -0.69
SMARCAL1-207ENST00000430374 LETM2Q2VYF4 491 aa10.77□□□□□ -0.69
SMARCAL1-207ENST00000430374 LARP1BQ659C4 914 aaKnown RBP10.77□□□□□ -0.69
SMARCAL1-207ENST00000430374 CXCL17Q6UXB2 119 aa10.77□□□□□ -0.69
SMARCAL1-207ENST00000430374 ETNPPLQ8TBG4 499 aa10.77□□□□□ -0.69
SMARCAL1-207ENST00000430374 GLT1D1Q96MS3 346 aa10.77□□□□□ -0.69
SMARCAL1-207ENST00000430374 GPR20Q99678 358 aa10.77□□□□□ -0.69
SMARCAL1-207ENST00000430374 SDF4Q9BRK5 362 aa10.77□□□□□ -0.69
SMARCAL1-207ENST00000430374 ZNF577Q9BSK1 485 aa10.77□□□□□ -0.69
SMARCAL1-207ENST00000430374 MTG1Q9BT17 334 aaPredicted RBP10.77□□□□□ -0.69
SMARCAL1-207ENST00000430374 SENP6Q9GZR1 1112 aaPredicted RBP10.77□□□□□ -0.69
SMARCAL1-207ENST00000430374 JPH1Q9HDC5 661 aaPredicted RBP10.77□□□□□ -0.69
SMARCAL1-207ENST00000430374 POLR3EQ9NVU0 708 aa10.77□□□□□ -0.69
SMARCAL1-207ENST00000430374 DDX25Q9UHL0 483 aaKnown RBP10.77□□□□□ -0.69
SMARCAL1-207ENST00000430374 KIAA0100Q14667 2235 aaKnown RBP10.77□□□□□ -0.69
SMARCAL1-207ENST00000430374 MCM3APO60318 1980 aa10.76□□□□□ -0.69
SMARCAL1-207ENST00000430374 H3BQV1 296 aa10.76□□□□□ -0.69
SMARCAL1-207ENST00000430374 NOP56O00567 594 aaKnown RBP10.76□□□□□ -0.69
SMARCAL1-207ENST00000430374 TBX3O15119 743 aa10.76□□□□□ -0.69
SMARCAL1-207ENST00000430374 SLC37A4O43826 429 aa10.76□□□□□ -0.69
SMARCAL1-207ENST00000430374 CCNT1O60563 726 aaKnown RBP10.76□□□□□ -0.69
SMARCAL1-207ENST00000430374 F2P00734 622 aa10.76□□□□□ -0.69
SMARCAL1-207ENST00000430374 SLC39A5Q6ZMH5 540 aa10.76□□□□□ -0.69
SMARCAL1-207ENST00000430374 SLC43A3Q8NBI5 491 aa10.76□□□□□ -0.69
SMARCAL1-207ENST00000430374 SLC5A5Q92911 643 aa10.76□□□□□ -0.69
SMARCAL1-207ENST00000430374 FERMT2Q96AC1 680 aa10.76□□□□□ -0.69
SMARCAL1-207ENST00000430374 RIT2Q99578 217 aa10.76□□□□□ -0.69
SMARCAL1-207ENST00000430374 C16orf70Q9BSU1 422 aa10.76□□□□□ -0.69
SMARCAL1-207ENST00000430374 HTATIP2Q9BUP3 242 aa10.76□□□□□ -0.69
SMARCAL1-207ENST00000430374 SEZ6LQ9BYH1 1024 aa10.76□□□□□ -0.69
SMARCAL1-207ENST00000430374 KCNMB3Q9NPA1 279 aa10.76□□□□□ -0.69
SMARCAL1-207ENST00000430374 STARD7Q9NQZ5 370 aa10.76□□□□□ -0.69
SMARCAL1-207ENST00000430374 TBC1D22BQ9NU19 505 aa10.76□□□□□ -0.69
SMARCAL1-207ENST00000430374 SLC9A2Q9UBY0 812 aa10.76□□□□□ -0.69
SMARCAL1-207ENST00000430374 GRIN2DO15399 1336 aa10.76□□□□□ -0.69
SMARCAL1-207ENST00000430374 TNRC18O15417 2968 aaPredicted RBP10.76□□□□□ -0.69
SMARCAL1-207ENST00000430374 WNT7AO00755 349 aa10.75□□□□□ -0.69
SMARCAL1-207ENST00000430374 SORBS3O60504 671 aa10.75□□□□□ -0.69
SMARCAL1-207ENST00000430374 ATG7O95352 703 aa10.75□□□□□ -0.69
SMARCAL1-207ENST00000430374 CCNE2O96020 404 aa10.75□□□□□ -0.69
SMARCAL1-207ENST00000430374 MYL3P08590 195 aa10.75□□□□□ -0.69
SMARCAL1-207ENST00000430374 SYT1P21579 422 aa10.75□□□□□ -0.69
SMARCAL1-207ENST00000430374 CDK7P50613 346 aa10.75□□□□□ -0.69
SMARCAL1-207ENST00000430374 ORC2Q13416 577 aaPredicted RBP10.75□□□□□ -0.69
SMARCAL1-207ENST00000430374 LRRC26Q2I0M4 334 aa10.75□□□□□ -0.69
SMARCAL1-207ENST00000430374 B3GNT9Q6UX72 402 aa10.75□□□□□ -0.69
SMARCAL1-207ENST00000430374 ANKRD33Q7Z3H0 272 aa10.75□□□□□ -0.69
SMARCAL1-207ENST00000430374 SEPT1Q8WYJ6 367 aa10.75□□□□□ -0.69
SMARCAL1-207ENST00000430374 KAT2BQ92831 832 aa10.75□□□□□ -0.69
SMARCAL1-207ENST00000430374 FAM20AQ96MK3 541 aa10.75□□□□□ -0.69
SMARCAL1-207ENST00000430374 PKD2L1Q9P0L9 805 aa10.75□□□□□ -0.69
SMARCAL1-207ENST00000430374 TELO2Q9Y4R8 837 aa10.75□□□□□ -0.69
SMARCAL1-207ENST00000430374 IGKV6D-21A0A0A0MT36 114 aa10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 A0A0U1RQG5 324 aaPredicted RBP10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 GSTTP1A0A1W2PQM5 241 aa10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 ARVCFO00192 962 aa10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 HAS3O00219 553 aa10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 LGR5O75473 907 aa10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 PSMD10O75832 226 aa10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 LGALS2P05162 132 aa10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 HSP90AA1P07900 732 aaKnown RBP10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 PDIA4P13667 645 aaKnown RBP10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 TOB1P50616 345 aaPredicted RBP10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 ATN1P54259 1190 aaPredicted RBP10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 ACTR2P61160 394 aa10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 KRT76Q01546 638 aa10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 ITGA7Q13683 1181 aa10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 GNL2Q13823 731 aaKnown RBP10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 MCTP1Q6DN14 999 aa10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 ZNF746Q6NUN9 644 aaPredicted RBP10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 NFRKBQ6P4R8 1299 aa10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 SESTD1Q86VW0 696 aa10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 SMAP1Q8IYB5 467 aaPredicted RBP10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 HAS1Q92839 578 aa10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 TOX2Q96NM4 488 aa10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 MTMR9Q96QG7 549 aa10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 KATNAL1Q9BW62 490 aa10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 FOXD4L1Q9NU39 408 aa10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 NOL7Q9UMY1 257 aaKnown RBP10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 EMSYQ7Z589 1322 aa10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 FRMPD3Q5JV73 1810 aa10.74□□□□□ -0.69
SMARCAL1-207ENST00000430374 H3BRB1 525 aa10.73□□□□□ -0.69
SMARCAL1-207ENST00000430374 NEMFO60524 1076 aa10.73□□□□□ -0.69
SMARCAL1-207ENST00000430374 GAS7O60861 476 aa10.73□□□□□ -0.69
SMARCAL1-207ENST00000430374 ZNF286BP0CG31 522 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms