RNA–Protein interactions for RNA: ENST00000428730.5

RHBDF1-204, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 2,751 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-204ENST00000428730 AMACRQ9UHK6 382 aa18■□□□□ 0.47
RHBDF1-204ENST00000428730 SART1O43290 800 aaKnown RBP17.99■□□□□ 0.47
RHBDF1-204ENST00000428730 UPP2O95045 317 aa17.99■□□□□ 0.47
RHBDF1-204ENST00000428730 SARNPP82979 210 aaKnown RBP17.99■□□□□ 0.47
RHBDF1-204ENST00000428730 PSMD1Q99460 953 aa17.99■□□□□ 0.47
RHBDF1-204ENST00000428730 CELF4Q9BZC1 486 aaKnown RBP17.99■□□□□ 0.47
RHBDF1-204ENST00000428730 TRIM31Q9BZY9 425 aa17.99■□□□□ 0.47
RHBDF1-204ENST00000428730 DPH5Q9H2P9 285 aa17.99■□□□□ 0.47
RHBDF1-204ENST00000428730 TRPC6Q9Y210 931 aa17.99■□□□□ 0.47
RHBDF1-204ENST00000428730 PCDHGC5Q9Y5F6 944 aa17.99■□□□□ 0.47
RHBDF1-204ENST00000428730 DYNLL1P63167 89 aaKnown RBP17.99■□□□□ 0.47
RHBDF1-204ENST00000428730 KCNJ2P63252 427 aa17.99■□□□□ 0.47
RHBDF1-204ENST00000428730 ZKSCAN8Q15776 578 aaPredicted RBP17.99■□□□□ 0.47
RHBDF1-204ENST00000428730 AGBL2Q5U5Z8 902 aa17.99■□□□□ 0.47
RHBDF1-204ENST00000428730 DDX17Q92841 729 aaKnown RBP17.99■□□□□ 0.47
RHBDF1-204ENST00000428730 ABCF2Q9UG63 623 aa17.99■□□□□ 0.47
RHBDF1-204ENST00000428730 ADAMTS1Q9UHI8 967 aa17.99■□□□□ 0.47
RHBDF1-204ENST00000428730 SLC12A4Q9UP95 1085 aa17.99■□□□□ 0.47
RHBDF1-204ENST00000428730 SSU72P8A0A1W2PR75 194 aa17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 CAND2O75155 1236 aa17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 DHX9Q08211 1270 aaKnown RBP17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 CUL1Q13616 776 aa17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 TMC3Q7Z5M5 1100 aa17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 CCSER1Q9C0I3 900 aa17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 CCDC194A0A1B0GVG4 234 aa17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 RBAK-RBAKDNI3L0D1 243 aa17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 KIF3CO14782 793 aa17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 DIAPH2O60879 1101 aa17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 TRIM28Q13263 835 aaKnown RBP17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 LRRC41Q15345 812 aa17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 SLC9C1Q4G0N8 1177 aa17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 ERMARDQ5T6L9 678 aa17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 CENPPQ6IPU0 288 aa17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 CCDC84Q86UT8 332 aaPredicted RBP17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 NLRP10Q86W26 655 aa17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 ARMC2Q8NEN0 867 aa17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 PARD3BQ8TEW8 1205 aa17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 TAF4BQ92750 862 aa17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 SELENOSQ9BQE4 189 aa17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 FAM129AQ9BZQ8 928 aa17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 ABCF3Q9NUQ8 709 aa17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 TNS3Q68CZ2 1445 aa17.98■□□□□ 0.47
RHBDF1-204ENST00000428730 SMIM23A6NLE4 172 aa17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 A8MUI8 341 aa17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 MYL1P05976 194 aa17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 CHN1P15882 459 aa17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 POLR2FP61218 127 aaKnown RBP17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 SLC4A8Q2Y0W8 1093 aa17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 KIF6Q6ZMV9 814 aa17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 DYMQ7RTS9 669 aa17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 SPICE1Q8N0Z3 855 aa17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 MICAL1Q8TDZ2 1067 aa17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 ZNF317Q96PQ6 595 aaPredicted RBP17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 F8VZ95 297 aa17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 TTI1O43156 1089 aa17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 DDAH1O94760 285 aa17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 NOL4O94818 638 aa17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 SHBGP04278 402 aa17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 SLC5A1P13866 664 aa17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 RPS6KA1Q15418 735 aa17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 SFMBT2Q5VUG0 894 aa17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 CDCA2Q69YH5 1023 aaPredicted RBP17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 ARMC9Q7Z3E5 817 aa17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 LRRC34Q8IZ02 419 aa17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 CCDC47Q96A33 483 aaKnown RBP17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 ELAC2Q9BQ52 826 aaKnown RBP17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 ATP8A1Q9Y2Q0 1164 aa17.97■□□□□ 0.47
RHBDF1-204ENST00000428730 MMEP08473 750 aa17.96■□□□□ 0.47
RHBDF1-204ENST00000428730 FAM83BQ5T0W9 1011 aa17.96■□□□□ 0.47
RHBDF1-204ENST00000428730 SCFD2Q8WU76 684 aa17.96■□□□□ 0.47
RHBDF1-204ENST00000428730 ZBTB10Q96DT7 871 aa17.96■□□□□ 0.47
RHBDF1-204ENST00000428730 IQCDQ96DY2 449 aa17.96■□□□□ 0.47
RHBDF1-204ENST00000428730 L3MBTL3Q96JM7 780 aaPredicted RBP17.96■□□□□ 0.47
RHBDF1-204ENST00000428730 NLRP3Q96P20 1036 aa17.96■□□□□ 0.47
RHBDF1-204ENST00000428730 SPAG5Q96R06 1193 aa17.96■□□□□ 0.47
RHBDF1-204ENST00000428730 MTMR7Q9Y216 660 aa17.96■□□□□ 0.47
RHBDF1-204ENST00000428730 CALM1P0DP23 149 aa17.96■□□□□ 0.47
RHBDF1-204ENST00000428730 CALM2P0DP24 149 aa17.96■□□□□ 0.47
RHBDF1-204ENST00000428730 CALM3P0DP25 149 aa17.96■□□□□ 0.47
RHBDF1-204ENST00000428730 RAPGEF1Q13905 1077 aa17.96■□□□□ 0.47
RHBDF1-204ENST00000428730 CEP120Q8N960 986 aa17.96■□□□□ 0.47
RHBDF1-204ENST00000428730 FAM133AQ8N9E0 248 aa17.96■□□□□ 0.47
RHBDF1-204ENST00000428730 P3H4Q92791 437 aa17.96■□□□□ 0.47
RHBDF1-204ENST00000428730 C7orf25Q9BPX7 421 aa17.96■□□□□ 0.47
RHBDF1-204ENST00000428730 LSM14BQ9BX40 385 aaKnown RBP17.96■□□□□ 0.47
RHBDF1-204ENST00000428730 TRMT112Q9UI30 125 aaKnown RBP17.96■□□□□ 0.47
RHBDF1-204ENST00000428730 PCDHA4Q9UN74 947 aa17.96■□□□□ 0.47
RHBDF1-204ENST00000428730 NOC2LQ9Y3T9 749 aaKnown RBP17.96■□□□□ 0.47
RHBDF1-204ENST00000428730 MYH7BA7E2Y1 1941 aa17.96■□□□□ 0.47
RHBDF1-204ENST00000428730 MAGEB6P1A0A0J9YX57 407 aa17.96■□□□□ 0.46
RHBDF1-204ENST00000428730 ANKS1AQ92625 1134 aa17.96■□□□□ 0.46
RHBDF1-204ENST00000428730 ANAPC4Q9UJX5 808 aa17.96■□□□□ 0.46
RHBDF1-204ENST00000428730 PCDHA6Q9UN73 950 aa17.96■□□□□ 0.46
RHBDF1-204ENST00000428730 PCDHA8Q9Y5H6 950 aa17.96■□□□□ 0.46
RHBDF1-204ENST00000428730 KCPQ6ZWJ8 1503 aa17.95■□□□□ 0.46
RHBDF1-204ENST00000428730 FAM170AA1A519 330 aa17.95■□□□□ 0.46
RHBDF1-204ENST00000428730 KIF4AO95239 1232 aa17.95■□□□□ 0.46
RHBDF1-204ENST00000428730 SERPING1P05155 500 aa17.95■□□□□ 0.46
RHBDF1-204ENST00000428730 CNNM4Q6P4Q7 775 aa17.95■□□□□ 0.46
RHBDF1-204ENST00000428730 LRRC55Q6ZSA7 311 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms