RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 RNPEPL1Q9HAU8 725 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 GTF3C1Q12789 2109 aa5.65□□□□□ -1.51
RIF1-203ENST00000428287 EYA4O95677 639 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 TPBGLP0DKB5 382 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 ANKLE2Q86XL3 938 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 ANKLE1Q8NAG6 615 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 DISC1Q9NRI5 854 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 CNOT8Q9UFF9 292 aaKnown RBP5.64□□□□□ -1.51
RIF1-203ENST00000428287 ANAPC4Q9UJX5 808 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 TDRD15B5MCY1 1934 aaKnown RBP5.64□□□□□ -1.51
RIF1-203ENST00000428287 LUC7L3O95232 432 aaKnown RBP5.64□□□□□ -1.51
RIF1-203ENST00000428287 NAA25Q14CX7 972 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 NAB2Q15742 525 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 OR52E8Q6IFG1 317 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 MPRIPQ6WCQ1 1025 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 CROCCP2Q86T23 111 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 TBC1D10CQ8IV04 446 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 AZIN2Q96A70 460 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 LAMA3Q16787 3333 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 SIGLEC16A6NMB1 481 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 RPN1P04843 607 aaKnown RBP5.64□□□□□ -1.51
RIF1-203ENST00000428287 PLEKP08567 350 aaPredicted RBP5.64□□□□□ -1.51
RIF1-203ENST00000428287 C10orf76Q5T2E6 689 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 THEMIS2Q5TEJ8 643 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 STAG2Q8N3U4 1231 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 LRRC57Q8N9N7 239 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 NGDNQ8NEJ9 315 aaKnown RBP5.64□□□□□ -1.51
RIF1-203ENST00000428287 SPDYE1Q8NFV5 336 aaPredicted RBP5.64□□□□□ -1.51
RIF1-203ENST00000428287 THOC1Q96FV9 657 aaKnown RBP5.64□□□□□ -1.51
RIF1-203ENST00000428287 CCDC43Q96MW1 224 aaKnown RBP5.64□□□□□ -1.51
RIF1-203ENST00000428287 DPH5Q9H2P9 285 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 SLITRK6Q9H5Y7 841 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 GDAQ9Y2T3 454 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 SPATA31A3Q5VYP0 1347 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 MROH7Q68CQ1 1323 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 EME2A4GXA9 379 aaPredicted RBP5.64□□□□□ -1.51
RIF1-203ENST00000428287 TMOD1P28289 359 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 C2orf54Q08AI8 447 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 RTN1Q16799 776 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 GUF1Q8N442 669 aaKnown RBP5.64□□□□□ -1.51
RIF1-203ENST00000428287 CNKSR2Q8WXI2 1034 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 CCDC28BQ9BUN5 200 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 CARD9Q9H257 536 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 POLD4Q9HCU8 107 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 TAB2Q9NYJ8 693 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 DCDC2CA8MYV0 355 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 CTNND1O60716 968 aaKnown RBP5.64□□□□□ -1.51
RIF1-203ENST00000428287 SNRPA1P09661 255 aaKnown RBP5.64□□□□□ -1.51
RIF1-203ENST00000428287 ATP2A2P16615 1042 aaKnown RBP5.64□□□□□ -1.51
RIF1-203ENST00000428287 EHHADHQ08426 723 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 E2F5Q15329 346 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 NBPF5PQ86XG9 351 aaPredicted RBP5.64□□□□□ -1.51
RIF1-203ENST00000428287 RASGEF1CQ8N431 466 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 NBPF15Q8N660 670 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 CCDC197Q8NCU1 140 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 NELFBQ8WX92 580 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 EPAS1Q99814 870 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 LUC7LQ9NQ29 371 aaKnown RBP5.64□□□□□ -1.51
RIF1-203ENST00000428287 PDLIM1O00151 329 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 WFS1O76024 890 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 LINGO3P0C6S8 592 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 ZNF654Q8IZM8 581 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 ABTB2Q8N961 1025 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 SLC24A3Q9HC58 644 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 PPANQ9NQ55 473 aaKnown RBP5.64□□□□□ -1.51
RIF1-203ENST00000428287 ADAM22Q9P0K1 906 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 VPS54Q9P1Q0 977 aa5.64□□□□□ -1.51
RIF1-203ENST00000428287 A0A087X0T9 212 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 ZSCAN9O15535 394 aaPredicted RBP5.63□□□□□ -1.51
RIF1-203ENST00000428287 GJB6O95452 261 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 FAM228BP0C875 321 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 MAGEA1P43355 309 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 ALDH5A1P51649 535 aaPredicted RBP5.63□□□□□ -1.51
RIF1-203ENST00000428287 TMEM63BQ5T3F8 832 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 MEI1Q5TIA1 1274 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 PROM2Q8N271 834 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 CAPZA3Q96KX2 299 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 SYT15Q9BQS2 421 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 PRAMEF22A3QJZ6 481 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 SPDYE3A6NKU9 549 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 CCNB1P14635 433 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 ATP6V1C1P21283 382 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 CXCR5P32302 372 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 MCAMP43121 646 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 PAPOLAP51003 745 aaKnown RBP5.63□□□□□ -1.51
RIF1-203ENST00000428287 MARSP56192 900 aaKnown RBP5.63□□□□□ -1.51
RIF1-203ENST00000428287 PPP1R7Q15435 360 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 TRADDQ15628 312 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 CCDC57Q2TAC2 916 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 CCDC38Q502W7 563 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 TMEM67Q5HYA8 995 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 NUGGCQ68CJ6 796 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 SAMD1Q6SPF0 538 aaPredicted RBP5.63□□□□□ -1.51
RIF1-203ENST00000428287 SESTD1Q86VW0 696 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 BICD1Q96G01 975 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 AK8Q96MA6 479 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 TAOK2Q9UL54 1235 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 PCDHGA4Q9Y5G9 962 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 PCDHA13Q9Y5I0 950 aa5.63□□□□□ -1.51
RIF1-203ENST00000428287 NHSQ6T4R5 1651 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms