RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 KDM1AO60341 852 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 USP17L8P0C7I0 530 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 RFC1P35251 1148 aaPredicted RBP6.2□□□□□ -1.42
HERC4-206ENST00000427635 KRT17Q04695 432 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 MTERF2Q49AM1 385 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 MYOCDQ8IZQ8 938 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 NELFBQ8WX92 580 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 CEP170P1Q96L14 293 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 HEXIM2Q96MH2 286 aaKnown RBP6.2□□□□□ -1.42
HERC4-206ENST00000427635 LZTFL1Q9NQ48 299 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 C6orf203Q9P0P8 240 aaPredicted RBP6.2□□□□□ -1.42
HERC4-206ENST00000427635 SOS2Q07890 1332 aaPredicted RBP6.2□□□□□ -1.42
HERC4-206ENST00000427635 EIF2AK4Q9P2K8 1649 aaKnown RBP6.2□□□□□ -1.42
HERC4-206ENST00000427635 FCER1AP12319 257 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 NSFP46459 744 aaKnown RBP6.2□□□□□ -1.42
HERC4-206ENST00000427635 TIMM10P62072 90 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 TFAMQ00059 246 aaKnown RBP6.2□□□□□ -1.42
HERC4-206ENST00000427635 TBC1D10BQ4KMP7 808 aaPredicted RBP6.2□□□□□ -1.42
HERC4-206ENST00000427635 KAZNQ674X7 775 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 DENND2CQ68D51 928 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 ARHGEF18Q6ZSZ5 1173 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 DNAAF3Q8N9W5 541 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 BEST2Q8NFU1 509 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 ASIC4Q96FT7 647 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 TMX3Q96JJ7 454 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 RUNDC3BQ96NL0 473 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 EFCC1Q9HA90 598 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 TOPORSQ9NS56 1045 aaPredicted RBP6.2□□□□□ -1.42
HERC4-206ENST00000427635 FBXL21Q9UKT6 434 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 FAM47E-STBD1D6RA91 191 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 TIMM44O43615 452 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 TUBBP07437 444 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 GAP43P17677 238 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 PSEN1P49768 467 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 MXD4Q14582 209 aaPredicted RBP6.19□□□□□ -1.42
HERC4-206ENST00000427635 RPS6KA1Q15418 735 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 CEP85Q6P2H3 762 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 PDXDC2PQ6P474 469 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 MIGA2Q7L4E1 593 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 ZNF713Q8N859 430 aaPredicted RBP6.19□□□□□ -1.42
HERC4-206ENST00000427635 ANKRD44Q8N8A2 993 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 FBXL13Q8NEE6 735 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 TMC2Q8TDI7 906 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 SCG3Q8WXD2 468 aaKnown RBP6.19□□□□□ -1.42
HERC4-206ENST00000427635 RPGRIP1Q96KN7 1286 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 TRIM62Q9BVG3 475 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 OLFML3Q9NRN5 406 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 IKBKBO14920 756 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 SLC26A4O43511 780 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 BMP3P12645 472 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 PHKA2P46019 1235 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 C4orf46Q504U0 113 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 TMTC1Q8IUR5 882 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 SPICE1Q8N0Z3 855 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 KCNB2Q92953 911 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 NT5C1BQ96P26 610 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 AFF2P51816 1311 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 TXNDC9O14530 226 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 ARHGAP6O43182 974 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 DDAH1O94760 285 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 ASMTLO95671 621 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 IFNB1P01574 187 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 ADCY8P40145 1251 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 TECP42680 631 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 YWHAHQ04917 246 aaPredicted RBP6.19□□□□□ -1.42
HERC4-206ENST00000427635 CHRNDQ07001 517 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 NR1H3Q13133 447 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 PDCD2Q16342 344 aaPredicted RBP6.19□□□□□ -1.42
HERC4-206ENST00000427635 SLC10A5Q5PT55 438 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 ANKRD20A3Q5VUR7 823 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 BZW1Q7L1Q6 419 aaKnown RBP6.19□□□□□ -1.42
HERC4-206ENST00000427635 ABHD8Q96I13 439 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 NLRP4Q96MN2 994 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 PARK7Q99497 189 aaKnown RBP6.19□□□□□ -1.42
HERC4-206ENST00000427635 ZBTB18Q99592 522 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 EPAS1Q99814 870 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 CUEDC2Q9H467 287 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 SOCS7O14512 581 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 PCP11498 1178 aaKnown RBP6.19□□□□□ -1.42
HERC4-206ENST00000427635 SKILP12757 684 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 RPS6KB1P23443 525 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 FCGRTP55899 365 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 LMNB2Q03252 620 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 TUBB2AQ13885 445 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 PTPRKQ15262 1439 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 TAF1CQ15572 869 aaPredicted RBP6.19□□□□□ -1.42
HERC4-206ENST00000427635 STXBP2Q15833 593 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 OOSP2Q86WS3 158 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 SYNE4Q8N205 404 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 PPM1KQ8N3J5 372 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 ZBTB38Q8NAP3 1195 aaPredicted RBP6.19□□□□□ -1.42
HERC4-206ENST00000427635 FAM76AQ8TAV0 307 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 WHAMMQ8TF30 809 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 LLPHQ9BRT6 129 aaKnown RBP6.19□□□□□ -1.42
HERC4-206ENST00000427635 TUBB2BQ9BVA1 445 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 TRIM31Q9BZY9 425 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 PI4KBQ9UBF8 816 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 CDV3Q9UKY7 258 aaKnown RBP6.19□□□□□ -1.42
HERC4-206ENST00000427635 PCDHB7Q9Y5E2 793 aa6.19□□□□□ -1.42
HERC4-206ENST00000427635 POLR2DO15514 142 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms