RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 DNAJC7Q99615 494 aa15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 NUP58Q9BVL2 599 aa15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 ZNF341Q9BYN7 854 aa15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 EHMT1Q9H9B1 1298 aa15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 GOLGB1Q14789 3259 aaKnown RBP15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 IGLV3-22A0A075B6J6 115 aa15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 NFKBIEO00221 500 aa15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 SPATA31C1P0DKV0 1188 aa15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 VWA3BQ502W6 1294 aa15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 ARSHQ5FYA8 562 aa15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 HERC4Q5GLZ8 1057 aaPredicted RBP15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 LRRC55Q6ZSA7 311 aa15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 RETREG2Q8NC44 543 aa15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 CHP1Q99653 195 aa15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 WDR18Q9BV38 432 aa15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 FGFBP2Q9BYJ0 223 aa15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 ZHX3Q9H4I2 956 aa15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 DNM3Q9UQ16 869 aa15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 PCDHA2Q9Y5H9 948 aa15.55■□□□□ 0.08
APOBEC3D-202ENST00000427494 ABCB11O95342 1321 aa15.54■□□□□ 0.08
APOBEC3D-202ENST00000427494 RASSF10A6NK89 507 aa15.54■□□□□ 0.08
APOBEC3D-202ENST00000427494 EGFRP00533 1210 aa15.54■□□□□ 0.08
APOBEC3D-202ENST00000427494 ZNF280AP59817 542 aaPredicted RBP15.54■□□□□ 0.08
APOBEC3D-202ENST00000427494 PSMC6P62333 389 aa15.54■□□□□ 0.08
APOBEC3D-202ENST00000427494 UBXN2AP68543 259 aa15.54■□□□□ 0.08
APOBEC3D-202ENST00000427494 PABPC4Q13310 644 aaKnown RBP eCLIP15.54■□□□□ 0.08
APOBEC3D-202ENST00000427494 MAN2A1Q16706 1144 aa15.54■□□□□ 0.08
APOBEC3D-202ENST00000427494 KIF4BQ2VIQ3 1234 aa15.54■□□□□ 0.08
APOBEC3D-202ENST00000427494 FOXR2Q6PJQ5 311 aa15.54■□□□□ 0.08
APOBEC3D-202ENST00000427494 LDHDQ86WU2 507 aa15.54■□□□□ 0.08
APOBEC3D-202ENST00000427494 LRRN4CLQ8ND94 238 aa15.54■□□□□ 0.08
APOBEC3D-202ENST00000427494 ERGIC2Q96RQ1 377 aa15.54■□□□□ 0.08
APOBEC3D-202ENST00000427494 TTYH3Q9C0H2 523 aa15.54■□□□□ 0.08
APOBEC3D-202ENST00000427494 PITPNM2Q9BZ72 1349 aa15.54■□□□□ 0.08
APOBEC3D-202ENST00000427494 PHF20L1A8MW92 1017 aa15.53■□□□□ 0.08
APOBEC3D-202ENST00000427494 CYP4A11Q02928 519 aa15.53■□□□□ 0.08
APOBEC3D-202ENST00000427494 TNFAIP1Q13829 316 aa15.53■□□□□ 0.08
APOBEC3D-202ENST00000427494 ELF2Q15723 593 aa15.53■□□□□ 0.08
APOBEC3D-202ENST00000427494 NELFCDQ8IXH7 590 aa15.53■□□□□ 0.08
APOBEC3D-202ENST00000427494 EIF2AK1Q9BQI3 630 aaKnown RBP15.53■□□□□ 0.08
APOBEC3D-202ENST00000427494 SLF1Q9BQI6 1058 aa15.53■□□□□ 0.08
APOBEC3D-202ENST00000427494 IRX2Q9BZI1 471 aaPredicted RBP15.53■□□□□ 0.08
APOBEC3D-202ENST00000427494 NDST4Q9H3R1 872 aa15.53■□□□□ 0.08
APOBEC3D-202ENST00000427494 FRMD3A2A2Y4 597 aa15.53■□□□□ 0.08
APOBEC3D-202ENST00000427494 KIF5CO60282 957 aa15.53■□□□□ 0.08
APOBEC3D-202ENST00000427494 RPS12P25398 132 aaKnown RBP15.53■□□□□ 0.08
APOBEC3D-202ENST00000427494 ZCWPW2Q504Y3 356 aa15.53■□□□□ 0.08
APOBEC3D-202ENST00000427494 ARHGAP29Q52LW3 1261 aa15.53■□□□□ 0.08
APOBEC3D-202ENST00000427494 SYT2Q8N9I0 419 aaPredicted RBP15.53■□□□□ 0.08
APOBEC3D-202ENST00000427494 TEPSINQ96N21 525 aa15.53■□□□□ 0.08
APOBEC3D-202ENST00000427494 ARID3AQ99856 593 aa15.53■□□□□ 0.08
APOBEC3D-202ENST00000427494 POLR3CQ9BUI4 534 aaPredicted RBP15.53■□□□□ 0.08
APOBEC3D-202ENST00000427494 MTFR1LQ9H019 292 aa15.53■□□□□ 0.08
APOBEC3D-202ENST00000427494 AGPAT5Q9NUQ2 364 aa15.53■□□□□ 0.08
APOBEC3D-202ENST00000427494 RBBP6Q7Z6E9 1792 aaKnown RBP15.52■□□□□ 0.08
APOBEC3D-202ENST00000427494 EML1O00423 815 aa15.52■□□□□ 0.07
APOBEC3D-202ENST00000427494 TRAF5O00463 557 aa15.52■□□□□ 0.07
APOBEC3D-202ENST00000427494 KIF20AO95235 890 aa15.52■□□□□ 0.07
APOBEC3D-202ENST00000427494 INPP5BP32019 993 aa15.52■□□□□ 0.07
APOBEC3D-202ENST00000427494 PTGER2P43116 358 aa15.52■□□□□ 0.07
APOBEC3D-202ENST00000427494 ZBED6P86452 979 aa15.52■□□□□ 0.07
APOBEC3D-202ENST00000427494 FKBP3Q00688 224 aaKnown RBP15.52■□□□□ 0.07
APOBEC3D-202ENST00000427494 GIT2Q14161 759 aa15.52■□□□□ 0.07
APOBEC3D-202ENST00000427494 LRCH2Q5VUJ6 765 aa15.52■□□□□ 0.07
APOBEC3D-202ENST00000427494 WDR59Q6PJI9 974 aa15.52■□□□□ 0.07
APOBEC3D-202ENST00000427494 MNS1Q8NEH6 495 aa15.52■□□□□ 0.07
APOBEC3D-202ENST00000427494 CGNQ9P2M7 1197 aaKnown RBP15.52■□□□□ 0.07
APOBEC3D-202ENST00000427494 CCPG1Q9ULG6 757 aa15.52■□□□□ 0.07
APOBEC3D-202ENST00000427494 EPN1Q9Y6I3 576 aaPredicted RBP15.52■□□□□ 0.07
APOBEC3D-202ENST00000427494 A0A1W2PQJ5 194 aa15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 CHMP2AO43633 222 aa15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 NDUFA10O95299 355 aa15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 ERCC3P19447 782 aa15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 CCDC40Q4G0X9 1142 aa15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 FIGNQ5HY92 759 aa15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 MICALL2Q8IY33 904 aa15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 ZNF397Q8NF99 534 aaPredicted RBP15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 AGBL1Q96MI9 1066 aa15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 REEP2Q9BRK0 252 aa15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 EMILIN3Q9NT22 766 aa15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 ZNHIT6Q9NWK9 470 aaKnown RBP15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 RGL1Q9NZL6 768 aa15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 BCS1LQ9Y276 419 aa15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 COL4A3BPQ9Y5P4 624 aa15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 ICAM1P05362 532 aa15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 GMPSP49915 693 aaPredicted RBP15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 MEA1Q16626 185 aa15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 SLC30A10Q6XR72 485 aa15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 SCFD1Q8WVM8 642 aa15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 SLC5A5Q92911 643 aa15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 IQCDQ96DY2 449 aa15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 BHMT2Q9H2M3 363 aa15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 SIK3Q9Y2K2 1263 aa15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 RABGAP1Q9Y3P9 1069 aa15.51■□□□□ 0.07
APOBEC3D-202ENST00000427494 WDR46O15213 610 aaKnown RBP15.5■□□□□ 0.07
APOBEC3D-202ENST00000427494 PSMD10O75832 226 aa15.5■□□□□ 0.07
APOBEC3D-202ENST00000427494 EYA4O95677 639 aa15.5■□□□□ 0.07
APOBEC3D-202ENST00000427494 MAP3K9P80192 1104 aa15.5■□□□□ 0.07
APOBEC3D-202ENST00000427494 RASSF7Q02833 373 aa15.5■□□□□ 0.07
APOBEC3D-202ENST00000427494 CEP55Q53EZ4 464 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms