RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 MFAP3LO75121 409 aa24.22■■□□□ 1.47
CNEP1R1-202ENST00000427478 KRT18P05783 430 aaKnown RBP24.22■■□□□ 1.47
CNEP1R1-202ENST00000427478 PRKCSHP14314 528 aaPredicted RBP24.22■■□□□ 1.47
CNEP1R1-202ENST00000427478 PTPRAP18433 802 aa24.22■■□□□ 1.47
CNEP1R1-202ENST00000427478 HIRAP54198 1017 aaPredicted RBP24.22■■□□□ 1.47
CNEP1R1-202ENST00000427478 PABPC4Q13310 644 aaKnown RBP eCLIP24.22■■□□□ 1.47
CNEP1R1-202ENST00000427478 FAM26FQ5R3K3 315 aa24.22■■□□□ 1.47
CNEP1R1-202ENST00000427478 CCDC65Q8IXS2 484 aa24.22■■□□□ 1.47
CNEP1R1-202ENST00000427478 SLC5A5Q92911 643 aa24.22■■□□□ 1.47
CNEP1R1-202ENST00000427478 PANX2Q96RD6 677 aa24.22■■□□□ 1.47
CNEP1R1-202ENST00000427478 AS3MTQ9HBK9 375 aa24.22■■□□□ 1.47
CNEP1R1-202ENST00000427478 DNM3Q9UQ16 869 aa24.22■■□□□ 1.47
CNEP1R1-202ENST00000427478 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.22■■□□□ 1.47
CNEP1R1-202ENST00000427478 COL11A1P12107 1806 aaPredicted RBP24.21■■□□□ 1.47
CNEP1R1-202ENST00000427478 BACE1P56817 501 aa24.21■■□□□ 1.47
CNEP1R1-202ENST00000427478 TUBGCP2Q9BSJ2 902 aa24.21■■□□□ 1.47
CNEP1R1-202ENST00000427478 TBC1D7Q9P0N9 293 aa24.21■■□□□ 1.47
CNEP1R1-202ENST00000427478 CTDP1Q9Y5B0 961 aaPredicted RBP24.21■■□□□ 1.47
CNEP1R1-202ENST00000427478 SSC5DA1L4H1 1573 aa24.21■■□□□ 1.47
CNEP1R1-202ENST00000427478 PSMD10O75832 226 aa24.2■■□□□ 1.47
CNEP1R1-202ENST00000427478 TPM1P09493 284 aa24.2■■□□□ 1.47
CNEP1R1-202ENST00000427478 HOXA7P31268 230 aaPredicted RBP24.2■■□□□ 1.47
CNEP1R1-202ENST00000427478 FXR1P51114 621 aaKnown RBP eCLIP24.2■■□□□ 1.47
CNEP1R1-202ENST00000427478 ARSHQ5FYA8 562 aa24.2■■□□□ 1.47
CNEP1R1-202ENST00000427478 MUM1L1Q5H9M0 696 aa24.2■■□□□ 1.47
CNEP1R1-202ENST00000427478 OTOP1Q7RTM1 612 aa24.2■■□□□ 1.47
CNEP1R1-202ENST00000427478 MB21D1Q8N884 522 aa24.2■■□□□ 1.47
CNEP1R1-202ENST00000427478 ZNF280CQ8ND82 737 aa24.2■■□□□ 1.47
CNEP1R1-202ENST00000427478 RGL1Q9NZL6 768 aa24.2■■□□□ 1.47
CNEP1R1-202ENST00000427478 B4DLN1 442 aa24.2■■□□□ 1.46
CNEP1R1-202ENST00000427478 ARP10275 920 aa24.2■■□□□ 1.46
CNEP1R1-202ENST00000427478 MCF2L2Q86YR7 1114 aa24.2■■□□□ 1.46
CNEP1R1-202ENST00000427478 MYOCDQ8IZQ8 938 aa24.2■■□□□ 1.46
CNEP1R1-202ENST00000427478 POLR3CQ9BUI4 534 aaPredicted RBP24.2■■□□□ 1.46
CNEP1R1-202ENST00000427478 FGFBP2Q9BYJ0 223 aa24.2■■□□□ 1.46
CNEP1R1-202ENST00000427478 SPON1Q9HCB6 807 aa24.2■■□□□ 1.46
CNEP1R1-202ENST00000427478 CCP110O43303 1012 aa24.19■■□□□ 1.46
CNEP1R1-202ENST00000427478 GAS7O60861 476 aa24.19■■□□□ 1.46
CNEP1R1-202ENST00000427478 MTIF2P46199 727 aaKnown RBP24.19■■□□□ 1.46
CNEP1R1-202ENST00000427478 SETQ01105 290 aaPredicted RBP24.19■■□□□ 1.46
CNEP1R1-202ENST00000427478 CNGA4Q8IV77 575 aa24.19■■□□□ 1.46
CNEP1R1-202ENST00000427478 SYT2Q8N9I0 419 aaPredicted RBP24.19■■□□□ 1.46
CNEP1R1-202ENST00000427478 ZNF577Q9BSK1 485 aa24.19■■□□□ 1.46
CNEP1R1-202ENST00000427478 RIOK3O14730 519 aaKnown RBP24.19■■□□□ 1.46
CNEP1R1-202ENST00000427478 PPP2R5CQ13362 524 aa24.19■■□□□ 1.46
CNEP1R1-202ENST00000427478 ZNF507Q8TCN5 953 aa24.19■■□□□ 1.46
CNEP1R1-202ENST00000427478 FHDC1Q9C0D6 1143 aaPredicted RBP24.19■■□□□ 1.46
CNEP1R1-202ENST00000427478 ZHX3Q9H4I2 956 aa24.19■■□□□ 1.46
CNEP1R1-202ENST00000427478 ZHX2Q9Y6X8 837 aa24.19■■□□□ 1.46
CNEP1R1-202ENST00000427478 RPTORQ8N122 1335 aa24.19■■□□□ 1.46
CNEP1R1-202ENST00000427478 RLFQ13129 1914 aa24.18■■□□□ 1.46
CNEP1R1-202ENST00000427478 ZBED4O75132 1171 aa24.18■■□□□ 1.46
CNEP1R1-202ENST00000427478 LRRC63Q05C16 580 aa24.18■■□□□ 1.46
CNEP1R1-202ENST00000427478 HERC4Q5GLZ8 1057 aaPredicted RBP24.18■■□□□ 1.46
CNEP1R1-202ENST00000427478 IL31RAQ8NI17 732 aa24.18■■□□□ 1.46
CNEP1R1-202ENST00000427478 ATG4CQ96DT6 458 aa24.18■■□□□ 1.46
CNEP1R1-202ENST00000427478 WNK4Q96J92 1243 aa24.18■■□□□ 1.46
CNEP1R1-202ENST00000427478 PITPNM2Q9BZ72 1349 aa24.18■■□□□ 1.46
CNEP1R1-202ENST00000427478 TRIM14Q14142 442 aa24.17■■□□□ 1.46
CNEP1R1-202ENST00000427478 CTTNQ14247 550 aaKnown RBP24.17■■□□□ 1.46
CNEP1R1-202ENST00000427478 TOGARAM2Q6ZUX3 1019 aa24.17■■□□□ 1.46
CNEP1R1-202ENST00000427478 KLRG1Q96E93 195 aa24.17■■□□□ 1.46
CNEP1R1-202ENST00000427478 MXRA8Q9BRK3 442 aa24.17■■□□□ 1.46
CNEP1R1-202ENST00000427478 RABGAP1Q9Y3P9 1069 aa24.17■■□□□ 1.46
CNEP1R1-202ENST00000427478 PCDHA2Q9Y5H9 948 aa24.17■■□□□ 1.46
CNEP1R1-202ENST00000427478 PPP2R3BQ9Y5P8 575 aa24.17■■□□□ 1.46
CNEP1R1-202ENST00000427478 FRMD3A2A2Y4 597 aa24.17■■□□□ 1.46
CNEP1R1-202ENST00000427478 SOWAHDA6NJG2 315 aa24.17■■□□□ 1.46
CNEP1R1-202ENST00000427478 NKRFO15226 690 aaKnown RBP eCLIP24.17■■□□□ 1.46
CNEP1R1-202ENST00000427478 HMGCS2P54868 508 aa24.17■■□□□ 1.46
CNEP1R1-202ENST00000427478 DYDC2Q96IM9 177 aa24.17■■□□□ 1.46
CNEP1R1-202ENST00000427478 TSG101Q99816 390 aa24.17■■□□□ 1.46
CNEP1R1-202ENST00000427478 BHMT2Q9H2M3 363 aa24.17■■□□□ 1.46
CNEP1R1-202ENST00000427478 PPP2R2CQ9Y2T4 447 aa24.17■■□□□ 1.46
CNEP1R1-202ENST00000427478 A0A1W2PQC6 194 aa24.16■■□□□ 1.46
CNEP1R1-202ENST00000427478 RNF225M0QZC1 329 aaPredicted RBP24.16■■□□□ 1.46
CNEP1R1-202ENST00000427478 VWA5AO00534 786 aa24.16■■□□□ 1.46
CNEP1R1-202ENST00000427478 DNM2P50570 870 aa24.16■■□□□ 1.46
CNEP1R1-202ENST00000427478 GHRHRQ02643 423 aa24.16■■□□□ 1.46
CNEP1R1-202ENST00000427478 PRKG1Q13976 671 aa24.16■■□□□ 1.46
CNEP1R1-202ENST00000427478 GIT2Q14161 759 aa24.16■■□□□ 1.46
CNEP1R1-202ENST00000427478 SYTL5Q8TDW5 730 aaPredicted RBP24.16■■□□□ 1.46
CNEP1R1-202ENST00000427478 CCDC51Q96ER9 411 aa24.16■■□□□ 1.46
CNEP1R1-202ENST00000427478 REEP2Q9BRK0 252 aa24.16■■□□□ 1.46
CNEP1R1-202ENST00000427478 NOC4LQ9BVI4 516 aaKnown RBP24.16■■□□□ 1.46
CNEP1R1-202ENST00000427478 UNC45AQ9H3U1 944 aa24.16■■□□□ 1.46
CNEP1R1-202ENST00000427478 TUFT1Q9NNX1 390 aa24.16■■□□□ 1.46
CNEP1R1-202ENST00000427478 PAXBP1Q9Y5B6 917 aa24.16■■□□□ 1.46
CNEP1R1-202ENST00000427478 ZSCAN12O43309 604 aa24.16■■□□□ 1.46
CNEP1R1-202ENST00000427478 DDNO94850 711 aaPredicted RBP24.16■■□□□ 1.46
CNEP1R1-202ENST00000427478 ITGB5P18084 799 aa24.16■■□□□ 1.46
CNEP1R1-202ENST00000427478 MTF1Q14872 753 aa24.16■■□□□ 1.46
CNEP1R1-202ENST00000427478 TPH2Q8IWU9 490 aa24.16■■□□□ 1.46
CNEP1R1-202ENST00000427478 REXO1L1PQ8IX06 675 aa24.16■■□□□ 1.46
CNEP1R1-202ENST00000427478 HSD17B14Q9BPX1 270 aa24.16■■□□□ 1.46
CNEP1R1-202ENST00000427478 WDR90Q96KV7 1748 aa24.15■■□□□ 1.46
CNEP1R1-202ENST00000427478 KIF2AO00139 706 aaPredicted RBP24.15■■□□□ 1.46
CNEP1R1-202ENST00000427478 IPO5O00410 1097 aaKnown RBP24.15■■□□□ 1.46
CNEP1R1-202ENST00000427478 EYA4O95677 639 aa24.15■■□□□ 1.46
CNEP1R1-202ENST00000427478 MIIPQ5JXC2 388 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms