RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 VIL1P09327 827 aaKnown RBP17.56■□□□□ 0.4
PKP4-205ENST00000426248 FAM83BQ5T0W9 1011 aa17.56■□□□□ 0.4
PKP4-205ENST00000426248 CHURC1Q8WUH1 139 aa17.56■□□□□ 0.4
PKP4-205ENST00000426248 TCP11Q8WWU5 503 aa17.56■□□□□ 0.4
PKP4-205ENST00000426248 HERC5Q9UII4 1024 aaKnown RBP17.56■□□□□ 0.4
PKP4-205ENST00000426248 MCM8Q9UJA3 840 aa17.56■□□□□ 0.4
PKP4-205ENST00000426248 MYBL1P10243 752 aa17.56■□□□□ 0.4
PKP4-205ENST00000426248 LMNB1P20700 586 aa17.56■□□□□ 0.4
PKP4-205ENST00000426248 STAT6P42226 847 aa17.56■□□□□ 0.4
PKP4-205ENST00000426248 CNGA4Q8IV77 575 aa17.56■□□□□ 0.4
PKP4-205ENST00000426248 CCDC13Q8IYE1 715 aa17.56■□□□□ 0.4
PKP4-205ENST00000426248 MMS19Q96T76 1030 aa17.56■□□□□ 0.4
PKP4-205ENST00000426248 HACL1Q9UJ83 578 aa17.56■□□□□ 0.4
PKP4-205ENST00000426248 USP14P54578 494 aa17.56■□□□□ 0.4
PKP4-205ENST00000426248 NBPF20Q3BBV1 942 aa17.56■□□□□ 0.4
PKP4-205ENST00000426248 NSMFQ6X4W1 530 aa17.56■□□□□ 0.4
PKP4-205ENST00000426248 GRAMD1CQ8IYS0 662 aa17.56■□□□□ 0.4
PKP4-205ENST00000426248 C7orf43Q8WVR3 580 aa17.56■□□□□ 0.4
PKP4-205ENST00000426248 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.56■□□□□ 0.4
PKP4-205ENST00000426248 TRIM10Q9UDY6 481 aa17.56■□□□□ 0.4
PKP4-205ENST00000426248 NNTQ13423 1086 aa17.55■□□□□ 0.4
PKP4-205ENST00000426248 ADGRF4Q8IZF3 695 aa17.55■□□□□ 0.4
PKP4-205ENST00000426248 FBXL16Q8N461 479 aa17.55■□□□□ 0.4
PKP4-205ENST00000426248 JAKMIP2Q96AA8 810 aa17.55■□□□□ 0.4
PKP4-205ENST00000426248 G3BP2Q9UN86 482 aaKnown RBP17.55■□□□□ 0.4
PKP4-205ENST00000426248 VEGFAP15692 232 aaPredicted RBP17.55■□□□□ 0.4
PKP4-205ENST00000426248 SPP2Q13103 211 aa17.55■□□□□ 0.4
PKP4-205ENST00000426248 CDC37Q16543 378 aaPredicted RBP17.55■□□□□ 0.4
PKP4-205ENST00000426248 FOXN1O15353 648 aa17.55■□□□□ 0.4
PKP4-205ENST00000426248 ALAS1P13196 640 aa17.55■□□□□ 0.4
PKP4-205ENST00000426248 KRT9P35527 623 aa17.55■□□□□ 0.4
PKP4-205ENST00000426248 HLTFQ14527 1009 aaKnown RBP eCLIP17.55■□□□□ 0.41e-6■■□□□ 11.4
PKP4-205ENST00000426248 CPLX4Q7Z7G2 160 aa17.55■□□□□ 0.4
PKP4-205ENST00000426248 NUCKS1Q9H1E3 243 aaKnown RBP17.55■□□□□ 0.4
PKP4-205ENST00000426248 FZD1Q9UP38 647 aa17.55■□□□□ 0.4
PKP4-205ENST00000426248 CNTNAP5Q8WYK1 1306 aa17.55■□□□□ 0.4
PKP4-205ENST00000426248 CMA1P23946 247 aa17.54■□□□□ 0.4
PKP4-205ENST00000426248 ECE1P42892 770 aa17.54■□□□□ 0.4
PKP4-205ENST00000426248 GUCY2FP51841 1108 aa17.54■□□□□ 0.4
PKP4-205ENST00000426248 UBXN2AP68543 259 aa17.54■□□□□ 0.4
PKP4-205ENST00000426248 PREPLQ4J6C6 727 aaPredicted RBP17.54■□□□□ 0.4
PKP4-205ENST00000426248 HIBCHQ6NVY1 386 aaPredicted RBP17.54■□□□□ 0.4
PKP4-205ENST00000426248 CCDC50Q8IVM0 306 aa17.54■□□□□ 0.4
PKP4-205ENST00000426248 ACER1Q8TDN7 264 aa17.54■□□□□ 0.4
PKP4-205ENST00000426248 CALML4Q96GE6 196 aa17.54■□□□□ 0.4
PKP4-205ENST00000426248 NDUFB10O96000 172 aa17.54■□□□□ 0.4
PKP4-205ENST00000426248 SLC8A1P32418 973 aa17.54■□□□□ 0.4
PKP4-205ENST00000426248 STAT2P52630 851 aa17.54■□□□□ 0.4
PKP4-205ENST00000426248 AMNQ9BXJ7 453 aa17.54■□□□□ 0.4
PKP4-205ENST00000426248 TMOD4Q9NZQ9 345 aa17.54■□□□□ 0.4
PKP4-205ENST00000426248 MAD2L2Q9UI95 211 aa17.54■□□□□ 0.4
PKP4-205ENST00000426248 CSADQ9Y600 493 aa17.54■□□□□ 0.4
PKP4-205ENST00000426248 TBCKQ8TEA7 893 aa17.54■□□□□ 0.4
PKP4-205ENST00000426248 PARD3BQ8TEW8 1205 aa17.54■□□□□ 0.4
PKP4-205ENST00000426248 HOOK2Q96ED9 719 aa17.54■□□□□ 0.4
PKP4-205ENST00000426248 VIPAS39Q9H9C1 493 aa17.54■□□□□ 0.4
PKP4-205ENST00000426248 NFKBIEO00221 500 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 RRAGBQ5VZM2 374 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.53■□□□□ 0.4
PKP4-205ENST00000426248 TMEM260Q9NX78 707 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 TFR2Q9UP52 801 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 USP17L15C9J2P7 530 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 USP17L13C9JLJ4 530 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 USP17L11C9JVI0 530 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 USP17L18D6R9N7 530 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 USP17L22D6RA61 530 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 USP17L17D6RBQ6 530 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 USP17L19D6RCP7 530 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 USP17L20D6RJB6 530 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 ZNF543Q08ER8 600 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 USP17L24Q0WX57 530 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 USP17L6PQ6QN14 398 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 CSRNP2Q9H175 543 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 ZHX2Q9Y6X8 837 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 ABL1P00519 1130 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 HOXA13P31271 388 aaPredicted RBP17.53■□□□□ 0.4
PKP4-205ENST00000426248 SYDE2Q5VT97 1194 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 C9orf131Q5VYM1 1079 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 IDI2Q9BXS1 227 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 SUPT20HL1Q3ZLR7 823 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 NEK8Q86SG6 692 aa17.53■□□□□ 0.4
PKP4-205ENST00000426248 ZNHIT6Q9NWK9 470 aaKnown RBP17.53■□□□□ 0.4
PKP4-205ENST00000426248 PNMA6FA0A0J9YX94 578 aa17.52■□□□□ 0.4
PKP4-205ENST00000426248 EPS15P42566 896 aa17.52■□□□□ 0.4
PKP4-205ENST00000426248 APBA1Q02410 837 aa17.52■□□□□ 0.4
PKP4-205ENST00000426248 SPATS2Q86XZ4 545 aaKnown RBP17.52■□□□□ 0.4
PKP4-205ENST00000426248 ARL8AQ96BM9 186 aa17.52■□□□□ 0.4
PKP4-205ENST00000426248 SERTAD1Q9UHV2 236 aa17.52■□□□□ 0.4
PKP4-205ENST00000426248 ZBTB21Q9ULJ3 1066 aa17.52■□□□□ 0.4
PKP4-205ENST00000426248 KRT14P02533 472 aa17.52■□□□□ 0.4
PKP4-205ENST00000426248 TECP42680 631 aa17.52■□□□□ 0.4
PKP4-205ENST00000426248 NT5C2P49902 561 aa17.52■□□□□ 0.4
PKP4-205ENST00000426248 TRAF1Q13077 416 aa17.52■□□□□ 0.4
PKP4-205ENST00000426248 QRICH1Q2TAL8 776 aa17.52■□□□□ 0.4
PKP4-205ENST00000426248 GNPTABQ3T906 1256 aa17.52■□□□□ 0.4
PKP4-205ENST00000426248 CDAN1Q8IWY9 1227 aa17.52■□□□□ 0.4
PKP4-205ENST00000426248 FAXDC2Q96IV6 333 aa17.52■□□□□ 0.4
PKP4-205ENST00000426248 TMCO5BA8MYB1 307 aa17.52■□□□□ 0.39
PKP4-205ENST00000426248 SNX1Q13596 522 aa17.52■□□□□ 0.39
PKP4-205ENST00000426248 NBPF12Q5TAG4 269 aaPredicted RBP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms