RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 SMCO2A6NFE2 343 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 ZBBXA8MT70 800 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 LGALS2P05162 132 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 ZNF286BP0CG31 522 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 ATP2A2P16615 1042 aaKnown RBP9.89□□□□□ -0.83
MDC1-204ENST00000422266 SP2Q02086 613 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 PFKFB3Q16875 520 aaPredicted RBP9.89□□□□□ -0.83
MDC1-204ENST00000422266 GDF6Q6KF10 455 aaPredicted RBP9.89□□□□□ -0.83
MDC1-204ENST00000422266 RUFY3Q7L099 469 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 LRRC8DQ7L1W4 858 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 TRIM22Q8IYM9 498 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 FAM177A1Q8N128 213 aaPredicted RBP9.89□□□□□ -0.83
MDC1-204ENST00000422266 SLC17A8Q8NDX2 589 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 CCDC148Q8NFR7 591 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 SEPT1Q8WYJ6 367 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 BRF1Q92994 677 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 SCLYQ96I15 445 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 GAS2L1Q99501 681 aaPredicted RBP9.89□□□□□ -0.83
MDC1-204ENST00000422266 SDF4Q9BRK5 362 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 C16orf70Q9BSU1 422 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 RNF26Q9BY78 433 aaPredicted RBP9.89□□□□□ -0.83
MDC1-204ENST00000422266 TM6SF1Q9BZW5 370 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 ZNF576Q9H609 170 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 SLC28A3Q9HAS3 691 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 C6orf50Q9HD87 102 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 JADE2Q9NQC1 790 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 TCEAL9Q9UHQ7 104 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 BRPF3Q9ULD4 1205 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 PCDHA11Q9Y5I1 949 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 CYP46A1Q9Y6A2 500 aa9.89□□□□□ -0.83
MDC1-204ENST00000422266 NID2Q14112 1375 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 UMODL1Q5DID0 1318 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 NRCAMQ92823 1304 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 CKBP12277 381 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 SCG2P13521 617 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 KCNJ6P48051 423 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 EVCP57679 992 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 FUT2Q10981 343 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 CEP55Q53EZ4 464 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 WWC2Q6AWC2 1192 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 CNKSR3Q6P9H4 555 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 FAM43BQ6ZT52 329 aaPredicted RBP9.88□□□□□ -0.83
MDC1-204ENST00000422266 NIPA1Q7RTP0 329 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 DEFB128Q7Z7B8 93 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 RSPH3Q86UC2 560 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 SKAP1Q86WV1 359 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 GPKOWQ92917 476 aaPredicted RBP eCLIP9.88□□□□□ -0.83
MDC1-204ENST00000422266 ATP6V0A1Q93050 837 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 TCEANC2Q96MN5 208 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 FAM161BQ96MY7 647 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 CDX2Q99626 313 aaPredicted RBP9.88□□□□□ -0.83
MDC1-204ENST00000422266 GPR20Q99678 358 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 MXRA8Q9BRK3 442 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 PBX4Q9BYU1 374 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 C22orf23Q9BZE7 217 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 SMARCAD1Q9H4L7 1026 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 AZI2Q9H6S1 392 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 ERAP1Q9NZ08 941 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 UBIAD1Q9Y5Z9 338 aa9.88□□□□□ -0.83
MDC1-204ENST00000422266 NFASCO94856 1347 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 ABHD14A-ACY1A0A1B0GW23 586 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 hCG_1642624A0A1W2PR95 340 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 STXBP3O00186 592 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 CPLX1O14810 134 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 PRPF3O43395 683 aaKnown RBP9.87□□□□□ -0.83
MDC1-204ENST00000422266 FOSL2P15408 326 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 ITGB5P18084 799 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 CDC27P30260 824 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 ADD1P35611 737 aaKnown RBP9.87□□□□□ -0.83
MDC1-204ENST00000422266 TCF7P36402 384 aaPredicted RBP9.87□□□□□ -0.83
MDC1-204ENST00000422266 ZNF76P36508 570 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 SREBF1P36956 1147 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 SLC26A2P50443 739 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 SETQ01105 290 aaPredicted RBP9.87□□□□□ -0.83
MDC1-204ENST00000422266 APOBRQ0VD83 1088 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 IKBKEQ14164 716 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 UBE2SQ16763 222 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 TAF2Q6P1X5 1199 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 SERINC5Q86VE9 423 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 RAB11FIP4Q86YS3 637 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 ZNF274Q96GC6 653 aaPredicted RBP9.87□□□□□ -0.83
MDC1-204ENST00000422266 GUCD1Q96NT3 240 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 ZMYND12Q9H0C1 365 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 ZSWIM6Q9HCJ5 1215 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 JPH1Q9HDC5 661 aaPredicted RBP9.87□□□□□ -0.83
MDC1-204ENST00000422266 SH3GLB2Q9NR46 395 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 SLC9A2Q9UBY0 812 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 MYH7BA7E2Y1 1941 aa9.87□□□□□ -0.83
MDC1-204ENST00000422266 RRN3P2A6NIE6 340 aa9.86□□□□□ -0.83
MDC1-204ENST00000422266 RSPH10B2B2RC85 870 aa9.86□□□□□ -0.83
MDC1-204ENST00000422266 CDKL5O76039 1030 aa9.86□□□□□ -0.83
MDC1-204ENST00000422266 CXCL10P02778 98 aa9.86□□□□□ -0.83
MDC1-204ENST00000422266 RSPH10BP0C881 870 aa9.86□□□□□ -0.83
MDC1-204ENST00000422266 SMIM10L2AP0DMW4 78 aa9.86□□□□□ -0.83
MDC1-204ENST00000422266 SMIM10L2BP0DMW5 78 aa9.86□□□□□ -0.83
MDC1-204ENST00000422266 KCNA2P16389 499 aa9.86□□□□□ -0.83
MDC1-204ENST00000422266 IFNAR1P17181 557 aa9.86□□□□□ -0.83
MDC1-204ENST00000422266 XBP1P17861 261 aa9.86□□□□□ -0.83
MDC1-204ENST00000422266 HOXC8P31273 242 aa9.86□□□□□ -0.83
MDC1-204ENST00000422266 THPOP40225 353 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms