RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 DOCK1Q14185 1865 aa16.13■□□□□ 0.17
HLA-DPA1-242ENST00000419277 POTEB3A0JP26 581 aa16.13■□□□□ 0.17
HLA-DPA1-242ENST00000419277 POTECB2RU33 542 aa16.13■□□□□ 0.17
HLA-DPA1-242ENST00000419277 WNT10BO00744 389 aa16.13■□□□□ 0.17
HLA-DPA1-242ENST00000419277 URI1O94763 535 aaPredicted RBP16.13■□□□□ 0.17
HLA-DPA1-242ENST00000419277 KRT18P05783 430 aaKnown RBP16.13■□□□□ 0.17
HLA-DPA1-242ENST00000419277 BCRP11274 1271 aa16.13■□□□□ 0.17
HLA-DPA1-242ENST00000419277 ERVK-24P63145 666 aa16.13■□□□□ 0.17
HLA-DPA1-242ENST00000419277 SHROOM1Q2M3G4 852 aaPredicted RBP16.13■□□□□ 0.17
HLA-DPA1-242ENST00000419277 FAM83BQ5T0W9 1011 aa16.13■□□□□ 0.17
HLA-DPA1-242ENST00000419277 POTEBQ6S5H4 581 aa16.13■□□□□ 0.17
HLA-DPA1-242ENST00000419277 NIPA1Q7RTP0 329 aa16.13■□□□□ 0.17
HLA-DPA1-242ENST00000419277 MCF2L2Q86YR7 1114 aa16.13■□□□□ 0.17
HLA-DPA1-242ENST00000419277 UBXN4Q92575 508 aa16.13■□□□□ 0.17
HLA-DPA1-242ENST00000419277 MYOZ2Q9NPC6 264 aa16.13■□□□□ 0.17
HLA-DPA1-242ENST00000419277 VAV3Q9UKW4 847 aa16.13■□□□□ 0.17
HLA-DPA1-242ENST00000419277 PLAGL2Q9UPG8 496 aa16.13■□□□□ 0.17
HLA-DPA1-242ENST00000419277 IGLV3-22A0A075B6J6 115 aa16.12■□□□□ 0.17
HLA-DPA1-242ENST00000419277 FAM86B1E9PN63 330 aa16.12■□□□□ 0.17
HLA-DPA1-242ENST00000419277 MSH4O15457 936 aa16.12■□□□□ 0.17
HLA-DPA1-242ENST00000419277 EYA4O95677 639 aa16.12■□□□□ 0.17
HLA-DPA1-242ENST00000419277 ICAM1P05362 532 aa16.12■□□□□ 0.17
HLA-DPA1-242ENST00000419277 FAM86B2P0C5J1 330 aa16.12■□□□□ 0.17
HLA-DPA1-242ENST00000419277 CXCL9Q07325 125 aa16.12■□□□□ 0.17
HLA-DPA1-242ENST00000419277 RRP1BQ14684 758 aaKnown RBP16.12■□□□□ 0.17
HLA-DPA1-242ENST00000419277 PTPN21Q16825 1174 aa16.12■□□□□ 0.17
HLA-DPA1-242ENST00000419277 BMT2Q1RMZ1 405 aa16.12■□□□□ 0.17
HLA-DPA1-242ENST00000419277 CEP112Q8N8E3 955 aa16.12■□□□□ 0.17
HLA-DPA1-242ENST00000419277 DESI2Q9BSY9 194 aa16.12■□□□□ 0.17
HLA-DPA1-242ENST00000419277 MRPL44Q9H9J2 332 aaKnown RBP16.12■□□□□ 0.17
HLA-DPA1-242ENST00000419277 OLFML3Q9NRN5 406 aa16.12■□□□□ 0.17
HLA-DPA1-242ENST00000419277 SEL1LQ9UBV2 794 aa16.12■□□□□ 0.17
HLA-DPA1-242ENST00000419277 PGAP2Q9UHJ9 254 aa16.12■□□□□ 0.17
HLA-DPA1-242ENST00000419277 CTAGE9A4FU28 777 aa16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 EIF3CLB5ME19 914 aaKnown RBP16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 KRT86O43790 486 aa16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 TUBBP07437 444 aa16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 ECE1P42892 770 aa16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 JAG1P78504 1218 aa16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 ECM1Q16610 540 aa16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 CATSPER3Q86XQ3 398 aa16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 SYN2Q92777 582 aaPredicted RBP16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 SLC5A5Q92911 643 aa16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 RIT2Q99578 217 aa16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 EIF3CQ99613 913 aaKnown RBP16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 KIAA1683Q9H0B3 1180 aa16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 PCDHA2Q9Y5H9 948 aa16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 CTNND1O60716 968 aaKnown RBP16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 MED24O75448 989 aa16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 SLURP2P0DP57 97 aa16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 USP14P54578 494 aa16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 CEP55Q53EZ4 464 aa16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 HERC4Q5GLZ8 1057 aaPredicted RBP16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 NCAPH2Q6IBW4 605 aa16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 STXBP4Q6ZWJ1 553 aa16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 PRPF38AQ8NAV1 312 aaKnown RBP16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 MTFR1LQ9H019 292 aa16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 TRAF3IP3Q9Y228 551 aa16.11■□□□□ 0.17
HLA-DPA1-242ENST00000419277 E9PMD0 336 aa16.1■□□□□ 0.17
HLA-DPA1-242ENST00000419277 POTEB2H3BUK9 544 aa16.1■□□□□ 0.17
HLA-DPA1-242ENST00000419277 PDXKO00764 312 aa16.1■□□□□ 0.17
HLA-DPA1-242ENST00000419277 EIF3DO15371 548 aaKnown RBP eCLIP16.1■□□□□ 0.17
HLA-DPA1-242ENST00000419277 TBCAO75347 108 aaKnown RBP16.1■□□□□ 0.17
HLA-DPA1-242ENST00000419277 TADA3O75528 432 aa16.1■□□□□ 0.17
HLA-DPA1-242ENST00000419277 SSBP05455 408 aaKnown RBP eCLIP16.1■□□□□ 0.17
HLA-DPA1-242ENST00000419277 PTGER2P43116 358 aa16.1■□□□□ 0.17
HLA-DPA1-242ENST00000419277 HSD17B4P51659 736 aa16.1■□□□□ 0.17
HLA-DPA1-242ENST00000419277 MTF1Q14872 753 aa16.1■□□□□ 0.17
HLA-DPA1-242ENST00000419277 NFIL3Q16649 462 aa16.1■□□□□ 0.17
HLA-DPA1-242ENST00000419277 SPICE1Q8N0Z3 855 aa16.1■□□□□ 0.17
HLA-DPA1-242ENST00000419277 ACER1Q8TDN7 264 aa16.1■□□□□ 0.17
HLA-DPA1-242ENST00000419277 PCMTD1Q96MG8 357 aaPredicted RBP16.1■□□□□ 0.17
HLA-DPA1-242ENST00000419277 TMEM39BQ9GZU3 492 aa16.1■□□□□ 0.17
HLA-DPA1-242ENST00000419277 LUC7LQ9NQ29 371 aaKnown RBP16.1■□□□□ 0.17
HLA-DPA1-242ENST00000419277 EMILIN3Q9NT22 766 aa16.1■□□□□ 0.17
HLA-DPA1-242ENST00000419277 SIK3Q9Y2K2 1263 aa16.1■□□□□ 0.17
HLA-DPA1-242ENST00000419277 POTEFA5A3E0 1075 aa16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 CETN3O15182 167 aa16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 SLC16A3O15427 465 aaKnown RBP16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 CALUO43852 315 aaPredicted RBP16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 PSMD10O75832 226 aa16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 CFBP00751 764 aa16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 POTEIP0CG38 1075 aa16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 SPATA31C1P0DKV0 1188 aa16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 RPL13P26373 211 aaKnown RBP16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 WHAMMP3Q1A5X7 153 aa16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 LRCH2Q5VUJ6 765 aa16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 DCAF15Q66K64 600 aa16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 POTEGQ6S5H5 508 aa16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 POTEEQ6S8J3 1075 aa16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 GPR161Q8N6U8 529 aaKnown RBP16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 WDR24Q96S15 920 aa16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 NAPGQ99747 312 aaPredicted RBP16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 SLF1Q9BQI6 1058 aa16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 METTL14Q9HCE5 456 aaKnown RBP16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 LZTFL1Q9NQ48 299 aa16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 CDC23Q9UJX2 597 aa16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 ODF2LQ9ULJ1 636 aa16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 ZBTB12Q9Y330 459 aaPredicted RBP16.09■□□□□ 0.17
HLA-DPA1-242ENST00000419277 DAAM1Q9Y4D1 1078 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms