RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 SF3B6Q9Y3B4 125 aaKnown RBP7.48□□□□□ -1.21
NIFKP3-201ENST00000417799 LAS1LQ9Y4W2 734 aaKnown RBP7.48□□□□□ -1.21
NIFKP3-201ENST00000417799 ST14Q9Y5Y6 855 aa7.48□□□□□ -1.21
NIFKP3-201ENST00000417799 PTCH2Q9Y6C5 1203 aa7.48□□□□□ -1.21
NIFKP3-201ENST00000417799 DLG5Q8TDM6 1919 aa7.47□□□□□ -1.21
NIFKP3-201ENST00000417799 KDM6AO15550 1401 aaPredicted RBP7.47□□□□□ -1.21
NIFKP3-201ENST00000417799 TRAV20A0A0B4J274 112 aa7.47□□□□□ -1.21
NIFKP3-201ENST00000417799 PRR19A6NJB7 356 aa7.47□□□□□ -1.21
NIFKP3-201ENST00000417799 ERVV-2B6SEH9 535 aa7.47□□□□□ -1.21
NIFKP3-201ENST00000417799 CLSTN1O94985 981 aa7.47□□□□□ -1.21
NIFKP3-201ENST00000417799 KCNH1O95259 989 aa7.47□□□□□ -1.21
NIFKP3-201ENST00000417799 EGFLAMQ63HQ2 1017 aa7.47□□□□□ -1.21
NIFKP3-201ENST00000417799 TRIM59Q8IWR1 403 aa7.47□□□□□ -1.21
NIFKP3-201ENST00000417799 DAGLBQ8NCG7 672 aa7.47□□□□□ -1.21
NIFKP3-201ENST00000417799 ZSWIM2Q8NEG5 633 aa7.47□□□□□ -1.21
NIFKP3-201ENST00000417799 ZDHHC15Q96MV8 337 aa7.47□□□□□ -1.21
NIFKP3-201ENST00000417799 AARSD1Q9BTE6 412 aaKnown RBP7.47□□□□□ -1.21
NIFKP3-201ENST00000417799 HDAC8Q9BY41 377 aa7.47□□□□□ -1.21
NIFKP3-201ENST00000417799 ARHGEF4Q9NR80 690 aa7.47□□□□□ -1.21
NIFKP3-201ENST00000417799 BABAM1Q9NWV8 329 aa7.47□□□□□ -1.21
NIFKP3-201ENST00000417799 BTBD11A6QL63 1104 aa7.46□□□□□ -1.22
NIFKP3-201ENST00000417799 H3BS24 57 aa7.46□□□□□ -1.22
NIFKP3-201ENST00000417799 TBX1O43435 398 aa7.46□□□□□ -1.22
NIFKP3-201ENST00000417799 CDC45O75419 566 aa7.46□□□□□ -1.22
NIFKP3-201ENST00000417799 FOSL1P15407 271 aa7.46□□□□□ -1.22
NIFKP3-201ENST00000417799 CLCN7P51798 805 aa7.46□□□□□ -1.22
NIFKP3-201ENST00000417799 IFI16Q16666 785 aaKnown RBP7.46□□□□□ -1.22
NIFKP3-201ENST00000417799 ZC3H12BQ5HYM0 836 aaKnown RBP7.46□□□□□ -1.22
NIFKP3-201ENST00000417799 PLD6Q8N2A8 252 aaKnown RBP7.46□□□□□ -1.22
NIFKP3-201ENST00000417799 ZNF655Q8N720 491 aaPredicted RBP7.46□□□□□ -1.22
NIFKP3-201ENST00000417799 NETO1Q8TDF5 533 aa7.46□□□□□ -1.22
NIFKP3-201ENST00000417799 TSR2Q969E8 191 aaKnown RBP7.46□□□□□ -1.22
NIFKP3-201ENST00000417799 HSPA12BQ96MM6 686 aa7.46□□□□□ -1.22
NIFKP3-201ENST00000417799 SLC52A2Q9HAB3 445 aa7.46□□□□□ -1.22
NIFKP3-201ENST00000417799 MIS18AQ9NYP9 233 aa7.46□□□□□ -1.22
NIFKP3-201ENST00000417799 TSPYL4Q9UJ04 414 aa7.46□□□□□ -1.22
NIFKP3-201ENST00000417799 FANCIQ9NVI1 1328 aa7.46□□□□□ -1.22
NIFKP3-201ENST00000417799 WNK3Q9BYP7 1800 aa7.45□□□□□ -1.22
NIFKP3-201ENST00000417799 THSD7AQ9UPZ6 1657 aa7.45□□□□□ -1.22
NIFKP3-201ENST00000417799 KRTAP9-6A0A140TA67 174 aa7.45□□□□□ -1.22
NIFKP3-201ENST00000417799 H0Y8X5 98 aa7.45□□□□□ -1.22
NIFKP3-201ENST00000417799 VAMP4O75379 141 aa7.45□□□□□ -1.22
NIFKP3-201ENST00000417799 GSNP06396 782 aa7.45□□□□□ -1.22
NIFKP3-201ENST00000417799 GRB10Q13322 594 aa7.45□□□□□ -1.22
NIFKP3-201ENST00000417799 TMEM67Q5HYA8 995 aa7.45□□□□□ -1.22
NIFKP3-201ENST00000417799 CWF19L1Q69YN2 538 aaKnown RBP7.45□□□□□ -1.22
NIFKP3-201ENST00000417799 TSPYL5Q86VY4 417 aaPredicted RBP7.45□□□□□ -1.22
NIFKP3-201ENST00000417799 BTN2A2Q8WVV5 523 aa7.45□□□□□ -1.22
NIFKP3-201ENST00000417799 UBE2FQ969M7 185 aa7.45□□□□□ -1.22
NIFKP3-201ENST00000417799 IPO9Q96P70 1041 aaKnown RBP7.45□□□□□ -1.22
NIFKP3-201ENST00000417799 CDC6Q99741 560 aa7.45□□□□□ -1.22
NIFKP3-201ENST00000417799 ZSWIM5Q9P217 1185 aa7.45□□□□□ -1.22
NIFKP3-201ENST00000417799 ZC3H7BQ9UGR2 993 aaKnown RBP7.45□□□□□ -1.22
NIFKP3-201ENST00000417799 SNX11Q9Y5W9 270 aa7.45□□□□□ -1.22
NIFKP3-201ENST00000417799 ADAMTS7Q9UKP4 1686 aa7.44□□□□□ -1.22
NIFKP3-201ENST00000417799 SHANK3Q9BYB0 1731 aa7.44□□□□□ -1.22
NIFKP3-201ENST00000417799 TMEM265A0A087WTH1 108 aa7.44□□□□□ -1.22
NIFKP3-201ENST00000417799 CAPNS1P04632 268 aa7.44□□□□□ -1.22
NIFKP3-201ENST00000417799 FURINP09958 794 aa7.44□□□□□ -1.22
NIFKP3-201ENST00000417799 TPP2P29144 1249 aaPredicted RBP7.44□□□□□ -1.22
NIFKP3-201ENST00000417799 GRIA2P42262 883 aa7.44□□□□□ -1.22
NIFKP3-201ENST00000417799 CTSKP43235 329 aa7.44□□□□□ -1.22
NIFKP3-201ENST00000417799 AMPD2Q01433 879 aa7.44□□□□□ -1.22
NIFKP3-201ENST00000417799 POU4F1Q01851 419 aa7.44□□□□□ -1.22
NIFKP3-201ENST00000417799 EXOSC9Q06265 439 aaKnown RBP7.44□□□□□ -1.22
NIFKP3-201ENST00000417799 PLEKHG4Q58EX7 1191 aa7.44□□□□□ -1.22
NIFKP3-201ENST00000417799 YOD1Q5VVQ6 348 aaPredicted RBP7.44□□□□□ -1.22
NIFKP3-201ENST00000417799 FOXB2Q5VYV0 432 aa7.44□□□□□ -1.22
NIFKP3-201ENST00000417799 GTF2IRD2BQ6EKJ0 949 aa7.44□□□□□ -1.22
NIFKP3-201ENST00000417799 CRTC3Q6UUV7 619 aa7.44□□□□□ -1.22
NIFKP3-201ENST00000417799 KRT27Q7Z3Y8 459 aa7.44□□□□□ -1.22
NIFKP3-201ENST00000417799 THAP5Q7Z6K1 395 aa7.44□□□□□ -1.22
NIFKP3-201ENST00000417799 GTF2IRD2Q86UP8 949 aa7.44□□□□□ -1.22
NIFKP3-201ENST00000417799 TCTN2Q96GX1 697 aa7.44□□□□□ -1.22
NIFKP3-201ENST00000417799 TMOD3Q9NYL9 352 aa7.44□□□□□ -1.22
NIFKP3-201ENST00000417799 LRRC37A3O60309 1634 aa7.44□□□□□ -1.22
NIFKP3-201ENST00000417799 MRC1P22897 1456 aa7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 CCDC163A0A0D9SF12 145 aa7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 WASH4PA8MWX3 477 aa7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 PRODHO43272 600 aa7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 KCNQ3O43525 872 aa7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 TGFB1P01137 390 aa7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 CT47B1P0C2W7 299 aaPredicted RBP7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 FGFR1P11362 822 aa7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 L1CAMP32004 1257 aa7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 SLC39A6Q13433 755 aa7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 DPY19L1Q2PZI1 675 aa7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 FAM209AQ5JX71 171 aa7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 PRSS36Q5K4E3 855 aa7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 ZNF790Q6PG37 636 aa7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 C16orf86Q6ZW13 317 aa7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 SCUBE1Q8IWY4 988 aa7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 PIGBQ92521 554 aa7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 DHRS4Q9BTZ2 278 aa7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 SEMA6BQ9H3T3 888 aa7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 SEMA3GQ9NS98 782 aa7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 GPR55Q9Y2T6 319 aaPredicted RBP7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 SCN11AQ9UI33 1791 aa7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 BCL9O00512 1426 aa7.43□□□□□ -1.22
NIFKP3-201ENST00000417799 TRBV23-1A0A0A0MS06 115 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms