RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 LCE2BO14633 110 aa6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 LPXNO60711 386 aa6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 PTMSP20962 102 aa6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 SETQ01105 290 aaPredicted RBP6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 PLAURQ03405 335 aa6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 MFSD14BQ5SR56 506 aa6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 ANO1Q5XXA6 986 aa6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 OTOP2Q7RTS6 562 aa6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 ZNF804AQ7Z570 1209 aa6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 PLEKHH3Q7Z736 793 aa6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 NCAPG2Q86XI2 1143 aa6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 CCNJLQ8IV13 435 aa6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 ZNF654Q8IZM8 581 aa6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 GPRC5AQ8NFJ5 357 aa6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 NEK9Q8TD19 979 aa6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 NSUN5Q96P11 429 aaKnown RBP6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 HHIPQ96QV1 700 aa6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 OXCT2Q9BYC2 517 aaPredicted RBP6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 ANKRD2Q9GZV1 360 aa6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 ASCC2Q9H1I8 757 aaPredicted RBP6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 CWC22Q9HCG8 908 aaKnown RBP6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 DZANK1Q9NVP4 752 aa6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 TECTAO75443 2155 aa6.71□□□□□ -1.34
ECHDC1-206ENST00000417628 FAM208BQ5VWN6 2430 aa6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 USP24Q9UPU5 2620 aa6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 LOC285556D6RIA3 1793 aa6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 MYO9BQ13459 2157 aa6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 GOLGA6L3A6NEY3 463 aa6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 H3BQ06 376 aaPredicted RBP6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 C2CD2LO14523 706 aa6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 HTATSF1O43719 755 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 PPFIA3O75145 1194 aa6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 KIF20AO95235 890 aa6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 EIF2S2P20042 333 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 PRKAR2BP31323 418 aa6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 CYP2C19P33261 490 aa6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 NRLP54845 237 aa6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 ZXDAP98168 799 aa6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 PLBD2Q8NHP8 589 aa6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 GDPD5Q8WTR4 605 aa6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 SECISBP2LQ93073 1101 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 TRIM44Q96DX7 344 aaPredicted RBP6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 EDC3Q96F86 508 aaKnown RBP6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 PPP4R2Q9NY27 417 aa6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 SPEF2Q9C093 1822 aa6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 MROH7Q68CQ1 1323 aa6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 PTPRFP10586 1907 aa6.7□□□□□ -1.34
ECHDC1-206ENST00000417628 FAM186AA6NE01 2351 aa6.69□□□□□ -1.34
ECHDC1-206ENST00000417628 FASNP49327 2511 aaKnown RBP6.69□□□□□ -1.34
ECHDC1-206ENST00000417628 CCER2I3L3R5 266 aa6.69□□□□□ -1.34
ECHDC1-206ENST00000417628 J3QW42 95 aa6.69□□□□□ -1.34
ECHDC1-206ENST00000417628 SEPT4O43236 478 aa6.69□□□□□ -1.34
ECHDC1-206ENST00000417628 GRIA4P48058 902 aa6.69□□□□□ -1.34
ECHDC1-206ENST00000417628 IRX3P78415 501 aaPredicted RBP6.69□□□□□ -1.34
ECHDC1-206ENST00000417628 TAP1Q03518 808 aa6.69□□□□□ -1.34
ECHDC1-206ENST00000417628 SIGLEC14Q08ET2 396 aa6.69□□□□□ -1.34
ECHDC1-206ENST00000417628 SF3A1Q15459 793 aaKnown RBP6.69□□□□□ -1.34
ECHDC1-206ENST00000417628 FAM47AQ5JRC9 791 aa6.69□□□□□ -1.34
ECHDC1-206ENST00000417628 C15orf52Q6ZUT6 534 aaKnown RBP6.69□□□□□ -1.34
ECHDC1-206ENST00000417628 VWA5B2Q8N398 1253 aa6.69□□□□□ -1.34
ECHDC1-206ENST00000417628 NOC4LQ9BVI4 516 aaKnown RBP6.69□□□□□ -1.34
ECHDC1-206ENST00000417628 DBF4Q9UBU7 674 aaPredicted RBP6.69□□□□□ -1.34
ECHDC1-206ENST00000417628 ANKRD11Q6UB99 2663 aaPredicted RBP6.69□□□□□ -1.34
ECHDC1-206ENST00000417628 MAP1BP46821 2468 aaKnown RBP6.69□□□□□ -1.34
ECHDC1-206ENST00000417628 METTL12A8MUP2 240 aa6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 GLRX3O76003 335 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 ADRB1P08588 477 aa6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 IGHMBP2P38935 993 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 CTSWP56202 376 aa6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 GPLD1P80108 840 aa6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 TRIM28Q13263 835 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 RSPO4Q2I0M5 234 aaPredicted RBP6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 SPRED3Q2MJR0 410 aa6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 RNF180Q86T96 592 aa6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 FAM151AQ8WW52 585 aa6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 TEKT1Q969V4 418 aa6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 NXPE3Q969Y0 559 aa6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 TRIM56Q9BRZ2 755 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 RSRP1Q9BUV0 290 aa6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 BHLHE41Q9C0J9 482 aaPredicted RBP6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 PORCNQ9H237 461 aa6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 PNNQ9H307 717 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 TXNRD2Q9NNW7 524 aa6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 STARD7Q9NQZ5 370 aa6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 KBTBD4Q9NVX7 518 aa6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 PPM1HQ9ULR3 514 aa6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 AKAP2Q9Y2D5 859 aa6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 LAS1LQ9Y4W2 734 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 GVINP1Q7Z2Y8 2422 aa6.68□□□□□ -1.34
ECHDC1-206ENST00000417628 PEX10O60683 326 aa6.67□□□□□ -1.34
ECHDC1-206ENST00000417628 FBXO24O75426 580 aa6.67□□□□□ -1.34
ECHDC1-206ENST00000417628 ARHGEF15O94989 841 aa6.67□□□□□ -1.34
ECHDC1-206ENST00000417628 PCCAP05165 728 aaPredicted RBP6.67□□□□□ -1.34
ECHDC1-206ENST00000417628 ITPKAP23677 461 aa6.67□□□□□ -1.34
ECHDC1-206ENST00000417628 ERVK-24P63145 666 aa6.67□□□□□ -1.34
ECHDC1-206ENST00000417628 DTHD1Q6ZMT9 781 aa6.67□□□□□ -1.34
ECHDC1-206ENST00000417628 SYT9Q86SS6 491 aa6.67□□□□□ -1.34
ECHDC1-206ENST00000417628 TMEM102Q8N9M5 508 aaPredicted RBP6.67□□□□□ -1.34
ECHDC1-206ENST00000417628 KCNG4Q8TDN1 519 aa6.67□□□□□ -1.34
ECHDC1-206ENST00000417628 NUP133Q8WUM0 1156 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms