RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 RSAD2Q8WXG1 361 aa14.02□□□□□ -0.16
SCN1B-202ENST00000415950 GIPC1O14908 333 aa14.02□□□□□ -0.17
SCN1B-202ENST00000415950 DDAH1O94760 285 aa14.02□□□□□ -0.17
SCN1B-202ENST00000415950 ERFP50548 548 aa14.02□□□□□ -0.17
SCN1B-202ENST00000415950 FAM182BQ5T319 152 aa14.02□□□□□ -0.17
SCN1B-202ENST00000415950 RBM43Q6ZSC3 357 aaKnown RBP14.02□□□□□ -0.17
SCN1B-202ENST00000415950 NT5C3AQ9H0P0 336 aa14.02□□□□□ -0.17
SCN1B-202ENST00000415950 PARP2Q9UGN5 583 aa14.02□□□□□ -0.17
SCN1B-202ENST00000415950 PGRMC1O00264 195 aaKnown RBP14.02□□□□□ -0.17
SCN1B-202ENST00000415950 ACSL3O95573 720 aa14.02□□□□□ -0.17
SCN1B-202ENST00000415950 FGGP02679 453 aa14.02□□□□□ -0.17
SCN1B-202ENST00000415950 CD44P16070 742 aaKnown RBP14.02□□□□□ -0.17
SCN1B-202ENST00000415950 SUSD4Q5VX71 490 aa14.02□□□□□ -0.17
SCN1B-202ENST00000415950 EMBQ6PCB8 327 aa14.02□□□□□ -0.17
SCN1B-202ENST00000415950 PIGBQ92521 554 aa14.02□□□□□ -0.17
SCN1B-202ENST00000415950 GGA1Q9UJY5 639 aa14.02□□□□□ -0.17
SCN1B-202ENST00000415950 PRPF6O94906 941 aaKnown RBP14.01□□□□□ -0.17
SCN1B-202ENST00000415950 PLEKP08567 350 aaPredicted RBP14.01□□□□□ -0.17
SCN1B-202ENST00000415950 NXNQ6DKJ4 435 aa14.01□□□□□ -0.17
SCN1B-202ENST00000415950 TMTC3Q6ZXV5 915 aa14.01□□□□□ -0.17
SCN1B-202ENST00000415950 DDX42Q86XP3 938 aaKnown RBP eCLIP14.01□□□□□ -0.17
SCN1B-202ENST00000415950 FAM178BQ8IXR5 827 aa14.01□□□□□ -0.17
SCN1B-202ENST00000415950 ADAM33Q9BZ11 813 aa14.01□□□□□ -0.17
SCN1B-202ENST00000415950 COL4A3BPQ9Y5P4 624 aa14.01□□□□□ -0.17
SCN1B-202ENST00000415950 IRAK1P51617 712 aa14.01□□□□□ -0.17
SCN1B-202ENST00000415950 SNAP25P60880 206 aa14.01□□□□□ -0.17
SCN1B-202ENST00000415950 RCN2Q14257 317 aa14.01□□□□□ -0.17
SCN1B-202ENST00000415950 ANKRD40Q6AI12 368 aa14.01□□□□□ -0.17
SCN1B-202ENST00000415950 TRIM65Q6PJ69 517 aa14.01□□□□□ -0.17
SCN1B-202ENST00000415950 STAG2Q8N3U4 1231 aa14.01□□□□□ -0.17
SCN1B-202ENST00000415950 PCIF1Q9H4Z3 704 aa14.01□□□□□ -0.17
SCN1B-202ENST00000415950 PCDHA1Q9Y5I3 950 aa14.01□□□□□ -0.17
SCN1B-202ENST00000415950 H0Y3Z8 333 aa14.01□□□□□ -0.17
SCN1B-202ENST00000415950 MYO1FO00160 1098 aa14.01□□□□□ -0.17
SCN1B-202ENST00000415950 TRAPPC10P48553 1259 aa14.01□□□□□ -0.17
SCN1B-202ENST00000415950 SLC8A3P57103 927 aa14.01□□□□□ -0.17
SCN1B-202ENST00000415950 LRRC14Q15048 493 aa14.01□□□□□ -0.17
SCN1B-202ENST00000415950 RASGRP2Q7LDG7 609 aa14.01□□□□□ -0.17
SCN1B-202ENST00000415950 DCLK2Q8N568 766 aa14.01□□□□□ -0.17
SCN1B-202ENST00000415950 JDP2Q8WYK2 163 aa14.01□□□□□ -0.17
SCN1B-202ENST00000415950 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.01□□□□□ -0.17
SCN1B-202ENST00000415950 SLC8A1P32418 973 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 EZH2Q15910 746 aaKnown RBP14□□□□□ -0.17
SCN1B-202ENST00000415950 EHD4Q9H223 541 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 LIMA1Q9UHB6 759 aaKnown RBP14□□□□□ -0.17
SCN1B-202ENST00000415950 EFCAB6Q5THR3 1501 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 WDR91A4D1P6 747 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 APBA1Q02410 837 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 TRAPPC3LQ5T215 181 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 ARHGEF10LQ9HCE6 1279 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 HEG1Q9ULI3 1381 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 TMOD1P28289 359 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 CARSP49589 748 aaKnown RBP14□□□□□ -0.17
SCN1B-202ENST00000415950 STK4Q13043 487 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 TAF12Q16514 161 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 NUGGCQ68CJ6 796 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 LACRTQ9GZZ8 138 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 THAP9Q9H5L6 903 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 DMGDHQ9UI17 866 aaKnown RBP14□□□□□ -0.17
SCN1B-202ENST00000415950 L1RE1Q9UN81 338 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 CPS1P31327 1500 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 SUN1O94901 812 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 HMGB2P26583 209 aaKnown RBP14□□□□□ -0.17
SCN1B-202ENST00000415950 BTDP43251 543 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 ERVK-24P63145 666 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 ALS2CLQ60I27 953 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 FAM47EQ6ZV65 393 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 ZNF579Q8NAF0 562 aaKnown RBP14□□□□□ -0.17
SCN1B-202ENST00000415950 EMILIN3Q9NT22 766 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 TMEM260Q9NX78 707 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 AMACRQ9UHK6 382 aa14□□□□□ -0.17
SCN1B-202ENST00000415950 NOP56O00567 594 aaKnown RBP13.99□□□□□ -0.17
SCN1B-202ENST00000415950 GNA14O95837 355 aa13.99□□□□□ -0.17
SCN1B-202ENST00000415950 MECOMQ03112 1051 aa13.99□□□□□ -0.17
SCN1B-202ENST00000415950 ZNF449Q6P9G9 518 aa13.99□□□□□ -0.17
SCN1B-202ENST00000415950 CCNI2Q6ZMN8 369 aaPredicted RBP13.99□□□□□ -0.17
SCN1B-202ENST00000415950 KCNV2Q8TDN2 545 aa13.99□□□□□ -0.17
SCN1B-202ENST00000415950 LRRC8CQ8TDW0 803 aa13.99□□□□□ -0.17
SCN1B-202ENST00000415950 P3H4Q92791 437 aa13.99□□□□□ -0.17
SCN1B-202ENST00000415950 FMO2Q99518 471 aa13.99□□□□□ -0.17
SCN1B-202ENST00000415950 E9PCH4 1651 aa13.99□□□□□ -0.17
SCN1B-202ENST00000415950 RNF17Q9BXT8 1623 aaKnown RBP13.99□□□□□ -0.17
SCN1B-202ENST00000415950 RFX5P48382 616 aaPredicted RBP13.99□□□□□ -0.17
SCN1B-202ENST00000415950 ILDR1Q86SU0 546 aaPredicted RBP13.99□□□□□ -0.17
SCN1B-202ENST00000415950 SRBD1Q8N5C6 995 aaKnown RBP13.99□□□□□ -0.17
SCN1B-202ENST00000415950 DDX27Q96GQ7 796 aaKnown RBP13.99□□□□□ -0.17
SCN1B-202ENST00000415950 FAM167BQ9BTA0 163 aa13.99□□□□□ -0.17
SCN1B-202ENST00000415950 GLT8D2Q9H1C3 349 aa13.99□□□□□ -0.17
SCN1B-202ENST00000415950 CLEC11AQ9Y240 323 aa13.99□□□□□ -0.17
SCN1B-202ENST00000415950 MAD1L1Q9Y6D9 718 aa13.99□□□□□ -0.17
SCN1B-202ENST00000415950 SMIM24O75264 130 aa13.99□□□□□ -0.17
SCN1B-202ENST00000415950 ATP2A3Q93084 1043 aa13.99□□□□□ -0.17
SCN1B-202ENST00000415950 LZTS2Q9BRK4 669 aa13.99□□□□□ -0.17
SCN1B-202ENST00000415950 ATG3Q9NT62 314 aa13.99□□□□□ -0.17
SCN1B-202ENST00000415950 STK10O94804 968 aaKnown RBP13.98□□□□□ -0.17
SCN1B-202ENST00000415950 SERPINB6P35237 376 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 FAM102BQ5T8I3 360 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.98□□□□□ -0.17
SCN1B-202ENST00000415950 MX2P20592 715 aa13.98□□□□□ -0.17
SCN1B-202ENST00000415950 SLC12A2P55011 1212 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms