RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 MYH7BA7E2Y1 1941 aa23.46■■□□□ 1.35
PTPRU-203ENST00000415600 C17orf102A2RUQ5 167 aa23.45■■□□□ 1.34
PTPRU-203ENST00000415600 CKBP12277 381 aa23.45■■□□□ 1.34
PTPRU-203ENST00000415600 RTN1Q16799 776 aa23.45■■□□□ 1.34
PTPRU-203ENST00000415600 APOA5Q6Q788 366 aa23.45■■□□□ 1.34
PTPRU-203ENST00000415600 CMTR1Q8N1G2 835 aaKnown RBP23.45■■□□□ 1.34
PTPRU-203ENST00000415600 GPRASP2Q96D09 838 aa23.45■■□□□ 1.34
PTPRU-203ENST00000415600 ZFP91Q96JP5 570 aaPredicted RBP23.45■■□□□ 1.34
PTPRU-203ENST00000415600 MYO9BQ13459 2157 aa23.45■■□□□ 1.34
PTPRU-203ENST00000415600 EMSYQ7Z589 1322 aa23.45■■□□□ 1.34
PTPRU-203ENST00000415600 A0A0C4DFX4 3053 aa23.45■■□□□ 1.34
PTPRU-203ENST00000415600 TANC1Q9C0D5 1861 aa23.44■■□□□ 1.34
PTPRU-203ENST00000415600 hCG_1984214I3L0E3 225 aa23.44■■□□□ 1.34
PTPRU-203ENST00000415600 LGALS2P05162 132 aa23.44■■□□□ 1.34
PTPRU-203ENST00000415600 RCAN1P53805 252 aa23.44■■□□□ 1.34
PTPRU-203ENST00000415600 ZNF713Q8N859 430 aaPredicted RBP23.44■■□□□ 1.34
PTPRU-203ENST00000415600 C16orf70Q9BSU1 422 aa23.44■■□□□ 1.34
PTPRU-203ENST00000415600 GLT8D2Q9H1C3 349 aa23.44■■□□□ 1.34
PTPRU-203ENST00000415600 PRDM12Q9H4Q4 367 aa23.44■■□□□ 1.34
PTPRU-203ENST00000415600 CDH23Q9H251 3354 aa23.44■■□□□ 1.34
PTPRU-203ENST00000415600 RABGGTBP53611 331 aa23.44■■□□□ 1.34
PTPRU-203ENST00000415600 RABEP1Q15276 862 aa23.44■■□□□ 1.34
PTPRU-203ENST00000415600 PPP1R18Q6NYC8 613 aa23.44■■□□□ 1.34
PTPRU-203ENST00000415600 CNKSR3Q6P9H4 555 aa23.44■■□□□ 1.34
PTPRU-203ENST00000415600 RAB11FIP4Q86YS3 637 aa23.44■■□□□ 1.34
PTPRU-203ENST00000415600 GPKOWQ92917 476 aaPredicted RBP eCLIP23.44■■□□□ 1.34
PTPRU-203ENST00000415600 VWCEQ96DN2 955 aa23.44■■□□□ 1.34
PTPRU-203ENST00000415600 YBX2Q9Y2T7 364 aaKnown RBP23.44■■□□□ 1.34
PTPRU-203ENST00000415600 CCDC196A0A1B0GTZ2 297 aa23.43■■□□□ 1.34
PTPRU-203ENST00000415600 MAFGO15525 162 aa23.43■■□□□ 1.34
PTPRU-203ENST00000415600 HSCBQ8IWL3 235 aa23.43■■□□□ 1.34
PTPRU-203ENST00000415600 ATP6V0A1Q93050 837 aa23.43■■□□□ 1.34
PTPRU-203ENST00000415600 CTAGE1Q96RT6 745 aa23.43■■□□□ 1.34
PTPRU-203ENST00000415600 NAPAP54920 295 aa23.42■■□□□ 1.34
PTPRU-203ENST00000415600 EXOSC10Q01780 885 aaKnown RBP23.42■■□□□ 1.34
PTPRU-203ENST00000415600 DHX38Q92620 1227 aaKnown RBP23.42■■□□□ 1.34
PTPRU-203ENST00000415600 GPR20Q99678 358 aa23.42■■□□□ 1.34
PTPRU-203ENST00000415600 ABHD14A-ACY1A0A1B0GW23 586 aa23.41■■□□□ 1.34
PTPRU-203ENST00000415600 CAND2O75155 1236 aa23.41■■□□□ 1.34
PTPRU-203ENST00000415600 CXCL10P02778 98 aa23.41■■□□□ 1.34
PTPRU-203ENST00000415600 SMIM10L2AP0DMW4 78 aa23.41■■□□□ 1.34
PTPRU-203ENST00000415600 SMIM10L2BP0DMW5 78 aa23.41■■□□□ 1.34
PTPRU-203ENST00000415600 IGFBP4P22692 258 aa23.41■■□□□ 1.34
PTPRU-203ENST00000415600 IKBKEQ14164 716 aa23.41■■□□□ 1.34
PTPRU-203ENST00000415600 SERINC5Q86VE9 423 aa23.41■■□□□ 1.34
PTPRU-203ENST00000415600 HERC6Q8IVU3 1022 aa23.41■■□□□ 1.34
PTPRU-203ENST00000415600 NAP1L2Q9ULW6 460 aaPredicted RBP23.41■■□□□ 1.34
PTPRU-203ENST00000415600 SCN5AQ14524 2016 aa23.41■■□□□ 1.34
PTPRU-203ENST00000415600 hCG_1642624A0A1W2PR95 340 aa23.4■■□□□ 1.34
PTPRU-203ENST00000415600 GOLGA8AA7E2F4 631 aa23.4■■□□□ 1.34
PTPRU-203ENST00000415600 GOLGA8BA8MQT2 603 aa23.4■■□□□ 1.34
PTPRU-203ENST00000415600 FOSP01100 380 aaPredicted RBP23.4■■□□□ 1.34
PTPRU-203ENST00000415600 THPOP40225 353 aa23.4■■□□□ 1.34
PTPRU-203ENST00000415600 MTMR1Q13613 665 aa23.4■■□□□ 1.34
PTPRU-203ENST00000415600 ZBED2Q9BTP6 218 aa23.4■■□□□ 1.34
PTPRU-203ENST00000415600 TSPYL2Q9H2G4 693 aaPredicted RBP23.4■■□□□ 1.34
PTPRU-203ENST00000415600 TRIP12Q14669 1992 aaPredicted RBP23.4■■□□□ 1.34
PTPRU-203ENST00000415600 KLF18A0A0U1RQI7 1052 aa23.4■■□□□ 1.34
PTPRU-203ENST00000415600 ANAPC15P60006 121 aa23.4■■□□□ 1.34
PTPRU-203ENST00000415600 SP4Q02446 784 aa23.4■■□□□ 1.34
PTPRU-203ENST00000415600 SEMA3FQ13275 785 aa23.4■■□□□ 1.34
PTPRU-203ENST00000415600 RASEFQ8IZ41 740 aa23.4■■□□□ 1.34
PTPRU-203ENST00000415600 SYMPKQ92797 1274 aaKnown RBP23.4■■□□□ 1.34
PTPRU-203ENST00000415600 IL17RAQ96F46 866 aa23.4■■□□□ 1.34
PTPRU-203ENST00000415600 PCDHA6Q9UN73 950 aa23.4■■□□□ 1.34
PTPRU-203ENST00000415600 PCDHA8Q9Y5H6 950 aa23.4■■□□□ 1.34
PTPRU-203ENST00000415600 RSPH10B2B2RC85 870 aa23.39■■□□□ 1.33
PTPRU-203ENST00000415600 TLL1O43897 1013 aa23.39■■□□□ 1.33
PTPRU-203ENST00000415600 CA3P07451 260 aa23.39■■□□□ 1.33
PTPRU-203ENST00000415600 RSPH10BP0C881 870 aa23.39■■□□□ 1.33
PTPRU-203ENST00000415600 UBE2SQ16763 222 aa23.39■■□□□ 1.33
PTPRU-203ENST00000415600 ZNF618Q5T7W0 954 aa23.39■■□□□ 1.33
PTPRU-203ENST00000415600 UTP14CQ5TAP6 766 aaKnown RBP23.39■■□□□ 1.33
PTPRU-203ENST00000415600 RIC8AQ9NPQ8 531 aa23.39■■□□□ 1.33
PTPRU-203ENST00000415600 CNTNAP5Q8WYK1 1306 aa23.38■■□□□ 1.33
PTPRU-203ENST00000415600 GTPBP6O43824 516 aaPredicted RBP23.38■■□□□ 1.33
PTPRU-203ENST00000415600 PSMA5P28066 241 aa23.38■■□□□ 1.33
PTPRU-203ENST00000415600 ADCY7P51828 1080 aa23.38■■□□□ 1.33
PTPRU-203ENST00000415600 WDR5P61964 334 aaKnown RBP23.38■■□□□ 1.33
PTPRU-203ENST00000415600 ZNF200P98182 395 aaPredicted RBP23.38■■□□□ 1.33
PTPRU-203ENST00000415600 COL9A3Q14050 684 aaPredicted RBP23.38■■□□□ 1.33
PTPRU-203ENST00000415600 TRIM71Q2Q1W2 868 aaKnown RBP23.38■■□□□ 1.33
PTPRU-203ENST00000415600 ADCK5Q3MIX3 580 aa23.38■■□□□ 1.33
PTPRU-203ENST00000415600 TNPO1Q92973 898 aaKnown RBP23.38■■□□□ 1.33
PTPRU-203ENST00000415600 TCEANC2Q96MN5 208 aa23.38■■□□□ 1.33
PTPRU-203ENST00000415600 V9GY48 417 aaPredicted RBP23.38■■□□□ 1.33
PTPRU-203ENST00000415600 NBNO60934 754 aa23.37■■□□□ 1.33
PTPRU-203ENST00000415600 LGR5O75473 907 aa23.37■■□□□ 1.33
PTPRU-203ENST00000415600 MYOGP15173 224 aa23.37■■□□□ 1.33
PTPRU-203ENST00000415600 WWC2Q6AWC2 1192 aa23.37■■□□□ 1.33
PTPRU-203ENST00000415600 BLOC1S2Q6QNY1 142 aa23.37■■□□□ 1.33
PTPRU-203ENST00000415600 SEPT1Q8WYJ6 367 aa23.37■■□□□ 1.33
PTPRU-203ENST00000415600 RNPEPQ9H4A4 650 aa23.37■■□□□ 1.33
PTPRU-203ENST00000415600 JADE2Q9NQC1 790 aa23.37■■□□□ 1.33
PTPRU-203ENST00000415600 BRPF3Q9ULD4 1205 aa23.37■■□□□ 1.33
PTPRU-203ENST00000415600 UBIAD1Q9Y5Z9 338 aa23.37■■□□□ 1.33
PTPRU-203ENST00000415600 NRCAMQ92823 1304 aa23.37■■□□□ 1.33
PTPRU-203ENST00000415600 HOXC8P31273 242 aa23.36■■□□□ 1.33
PTPRU-203ENST00000415600 TCF7P36402 384 aaPredicted RBP23.36■■□□□ 1.33
PTPRU-203ENST00000415600 METAP2P50579 478 aaKnown RBP eCLIP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms