RNA–Protein interactions for RNA: ENST00000415361.6

CTNND1-206, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-206ENST00000415361 ARHGAP4P98171 946 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 INTS5Q6P9B9 1019 aaKnown RBP9.2□□□□□ -0.94
CTNND1-206ENST00000415361 ARHGEF2Q92974 986 aaKnown RBP9.2□□□□□ -0.94
CTNND1-206ENST00000415361 A0A1W2PQ27 194 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 A0A1W2PQ64 194 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 A0A1W2PQD8 194 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 NTSR2O95665 410 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 STX2P32856 288 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 SNAP25P60880 206 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 MYO1EQ12965 1108 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 SYDE2Q5VT97 1194 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 GIMAP8Q8ND71 665 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-206ENST00000415361 MAP4K1Q92918 833 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 OTUD5Q96G74 571 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 CARD6Q9BX69 1037 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 LSG1Q9H089 658 aaKnown RBP9.2□□□□□ -0.94
CTNND1-206ENST00000415361 GPBP1L1Q9HC44 474 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-206ENST00000415361 ANKFY1Q9P2R3 1169 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 ZHX1Q9UKY1 873 aaPredicted RBP9.2□□□□□ -0.94
CTNND1-206ENST00000415361 IQGAP1P46940 1657 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 BRD1O95696 1058 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 IGBP1P78318 339 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 PPP2R5CQ13362 524 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 EXOC3L4Q17RC7 722 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 SEPT14Q6ZU15 432 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 SPATS2Q86XZ4 545 aaKnown RBP9.2□□□□□ -0.94
CTNND1-206ENST00000415361 NME8Q8N427 588 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 RILPQ96NA2 401 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 KMT5AQ9NQR1 393 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 RGS12O14924 1447 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 PPLO60437 1756 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 KIF3CO14782 793 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 DLATP10515 647 aaKnown RBP9.2□□□□□ -0.94
CTNND1-206ENST00000415361 GYS1P13807 737 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 ANXA13P27216 316 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 PSMD2Q13200 908 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 SESTD1Q86VW0 696 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 CCHCR1Q8TD31 782 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 GSDMAQ96QA5 445 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 HNRNPDLO14979 420 aaKnown RBP9.2□□□□□ -0.94
CTNND1-206ENST00000415361 SF3B3Q15393 1217 aaKnown RBP9.2□□□□□ -0.94
CTNND1-206ENST00000415361 ADCK5Q3MIX3 580 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 KRT71Q3SY84 523 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 TRIM42Q8IWZ5 723 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 PPM1KQ8N3J5 372 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 RIPOR2Q9Y4F9 1068 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 PCDHB4Q9Y5E5 795 aa9.2□□□□□ -0.94
CTNND1-206ENST00000415361 ARHGAP23Q9P227 1491 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 HSPA8P11142 646 aaKnown RBP9.19□□□□□ -0.94
CTNND1-206ENST00000415361 EEF1GP26641 437 aaKnown RBP9.19□□□□□ -0.94
CTNND1-206ENST00000415361 BSPRYQ5W0U4 402 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 CCDC13Q8IYE1 715 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 CEP120Q8N960 986 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 LARP4BQ92615 738 aaKnown RBP9.19□□□□□ -0.94
CTNND1-206ENST00000415361 MXD3Q9BW11 206 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 SPZ1Q9BXG8 430 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 SEPT10Q9P0V9 454 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 VWDEQ8N2E2 1590 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 KCNK3O14649 394 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 EP400NLQ6ZTU2 488 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 TCP11Q8WWU5 503 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 SCYL1Q96KG9 808 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 DISC1Q9NRI5 854 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 DONSONQ9NYP3 566 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 HACL1Q9UJ83 578 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 MROH7-TTC4A0A0A0MT08 1334 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 GNAT1P11488 350 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 RNASELQ05823 741 aaKnown RBP9.19□□□□□ -0.94
CTNND1-206ENST00000415361 C10orf76Q5T2E6 689 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 TMEM179Q6ZVK1 233 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 RASEFQ8IZ41 740 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 PIGSQ96S52 555 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 STRBPQ96SI9 672 aaKnown RBP9.19□□□□□ -0.94
CTNND1-206ENST00000415361 SCAF8Q9UPN6 1271 aaKnown RBP9.19□□□□□ -0.94
CTNND1-206ENST00000415361 POLR2FP61218 127 aaKnown RBP9.19□□□□□ -0.94
CTNND1-206ENST00000415361 SLC44A5Q8NCS7 719 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 STAMQ92783 540 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 CABS1Q96KC9 395 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 CPSF3Q9UKF6 684 aaKnown RBP9.19□□□□□ -0.94
CTNND1-206ENST00000415361 BAG5Q9UL15 447 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 DEPDC5O75140 1603 aa9.19□□□□□ -0.94
CTNND1-206ENST00000415361 AFPP02771 609 aaKnown RBP9.18□□□□□ -0.94
CTNND1-206ENST00000415361 INPP5BP32019 993 aa9.18□□□□□ -0.94
CTNND1-206ENST00000415361 PCK1P35558 622 aa9.18□□□□□ -0.94
CTNND1-206ENST00000415361 SH3BGRP55822 239 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-206ENST00000415361 STYK1Q6J9G0 422 aa9.18□□□□□ -0.94
CTNND1-206ENST00000415361 ARMCX2Q7L311 632 aa9.18□□□□□ -0.94
CTNND1-206ENST00000415361 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.18□□□□□ -0.94
CTNND1-206ENST00000415361 OSBPL3Q9H4L5 887 aa9.18□□□□□ -0.94
CTNND1-206ENST00000415361 FBXO40Q9UH90 709 aa9.18□□□□□ -0.94
CTNND1-206ENST00000415361 KIAA1210Q9ULL0 1709 aa9.18□□□□□ -0.94
CTNND1-206ENST00000415361 GSTA1P08263 222 aa9.18□□□□□ -0.94
CTNND1-206ENST00000415361 GSTA2P09210 222 aa9.18□□□□□ -0.94
CTNND1-206ENST00000415361 ABCB4P21439 1286 aa9.18□□□□□ -0.94
CTNND1-206ENST00000415361 CTNNA1P35221 906 aaKnown RBP9.18□□□□□ -0.94
CTNND1-206ENST00000415361 TRMT44Q8IYL2 757 aaKnown RBP9.18□□□□□ -0.94
CTNND1-206ENST00000415361 NDUFAF2Q8N183 169 aa9.18□□□□□ -0.94
CTNND1-206ENST00000415361 DCAF4Q8WV16 495 aa9.18□□□□□ -0.94
CTNND1-206ENST00000415361 SYMPKQ92797 1274 aaKnown RBP9.18□□□□□ -0.94
CTNND1-206ENST00000415361 PGBD1Q96JS3 809 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms