RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 GRAPQ13588 217 aa5.88□□□□□ -1.47
PTPRK-210ENST00000415055 IFI16Q16666 785 aaKnown RBP5.88□□□□□ -1.47
PTPRK-210ENST00000415055 EGFLAMQ63HQ2 1017 aa5.88□□□□□ -1.47
PTPRK-210ENST00000415055 SCARA3Q6AZY7 606 aa5.88□□□□□ -1.47
PTPRK-210ENST00000415055 GRAPLQ8TC17 118 aaPredicted RBP5.88□□□□□ -1.47
PTPRK-210ENST00000415055 CD99L2Q8TCZ2 262 aa5.88□□□□□ -1.47
PTPRK-210ENST00000415055 DPF3Q92784 378 aa5.88□□□□□ -1.47
PTPRK-210ENST00000415055 PHACTR3Q96KR7 559 aa5.88□□□□□ -1.47
PTPRK-210ENST00000415055 EYA3Q99504 573 aa5.88□□□□□ -1.47
PTPRK-210ENST00000415055 TMEM39AQ9NV64 488 aa5.88□□□□□ -1.47
PTPRK-210ENST00000415055 ADAMTS1Q9UHI8 967 aa5.88□□□□□ -1.47
PTPRK-210ENST00000415055 SAMM50Q9Y512 469 aa5.88□□□□□ -1.47
PTPRK-210ENST00000415055 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.88□□□□□ -1.47
PTPRK-210ENST00000415055 PSME4Q14997 1843 aa5.88□□□□□ -1.47
PTPRK-210ENST00000415055 LEFTY1O75610 366 aa5.87□□□□□ -1.47
PTPRK-210ENST00000415055 RNASE1P07998 156 aaKnown RBP5.87□□□□□ -1.47
PTPRK-210ENST00000415055 TAF7Q15545 349 aaPredicted RBP5.87□□□□□ -1.47
PTPRK-210ENST00000415055 SLC9C1Q4G0N8 1177 aa5.87□□□□□ -1.47
PTPRK-210ENST00000415055 ZNF648Q5T619 568 aaPredicted RBP5.87□□□□□ -1.47
PTPRK-210ENST00000415055 ARMC9Q7Z3E5 817 aa5.87□□□□□ -1.47
PTPRK-210ENST00000415055 ZNF34Q8IZ26 560 aa5.87□□□□□ -1.47
PTPRK-210ENST00000415055 PI4K2BQ8TCG2 481 aa5.87□□□□□ -1.47
PTPRK-210ENST00000415055 STK35Q8TDR2 534 aa5.87□□□□□ -1.47
PTPRK-210ENST00000415055 KCNB2Q92953 911 aa5.87□□□□□ -1.47
PTPRK-210ENST00000415055 ERO1AQ96HE7 468 aa5.87□□□□□ -1.47
PTPRK-210ENST00000415055 HRASLS5Q96KN8 279 aa5.87□□□□□ -1.47
PTPRK-210ENST00000415055 RHOVQ96L33 236 aa5.87□□□□□ -1.47
PTPRK-210ENST00000415055 DUSP23Q9BVJ7 150 aa5.87□□□□□ -1.47
PTPRK-210ENST00000415055 KRTAP4-7Q9BYR0 210 aa5.87□□□□□ -1.47
PTPRK-210ENST00000415055 BRINP2Q9C0B6 783 aa5.87□□□□□ -1.47
PTPRK-210ENST00000415055 MBNL3Q9NUK0 354 aaKnown RBP5.87□□□□□ -1.47
PTPRK-210ENST00000415055 TRMT112Q9UI30 125 aaKnown RBP5.87□□□□□ -1.47
PTPRK-210ENST00000415055 PTPN22Q9Y2R2 807 aa5.87□□□□□ -1.47
PTPRK-210ENST00000415055 RTL9Q8NET4 1388 aa5.87□□□□□ -1.47
PTPRK-210ENST00000415055 DUOX1Q9NRD9 1551 aa5.87□□□□□ -1.47
PTPRK-210ENST00000415055 LRRC37AA6NMS7 1700 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 TMEM265A0A087WTH1 108 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 CEACAM5P06731 702 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 VIL1P09327 827 aaKnown RBP5.86□□□□□ -1.47
PTPRK-210ENST00000415055 HSPA5P11021 654 aaKnown RBP5.86□□□□□ -1.47
PTPRK-210ENST00000415055 NASPP49321 788 aaPredicted RBP5.86□□□□□ -1.47
PTPRK-210ENST00000415055 LIG3P49916 1009 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 OXCT1P55809 520 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 GPSM2P81274 684 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 FAM160A1Q05DH4 1040 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 TNNI3KQ59H18 835 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 SLC10A5Q5PT55 438 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 RASIP1Q5U651 963 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 PCNX4Q63HM2 1172 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 TTBK2Q6IQ55 1244 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 AGMOQ6ZNB7 445 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 PDZD3Q86UT5 571 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 SULF2Q8IWU5 870 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 PHC3Q8NDX5 983 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 FAM168AQ92567 244 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 THUMPD2Q9BTF0 503 aaKnown RBP5.86□□□□□ -1.47
PTPRK-210ENST00000415055 PIF1Q9H611 641 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 CBX8Q9HC52 389 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 SSU72Q9NP77 194 aaKnown RBP5.86□□□□□ -1.47
PTPRK-210ENST00000415055 MYOZ2Q9NPC6 264 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 POLLQ9UGP5 575 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 ADAMTS6Q9UKP5 1117 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 EFR3BQ9Y2G0 817 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 R3HCC1Q9Y3T6 440 aaKnown RBP5.86□□□□□ -1.47
PTPRK-210ENST00000415055 U3KQE9 123 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 UNC80Q8N2C7 3258 aa5.86□□□□□ -1.47
PTPRK-210ENST00000415055 KDM3BQ7LBC6 1761 aa5.85□□□□□ -1.47
PTPRK-210ENST00000415055 SH3TC1Q8TE82 1336 aa5.85□□□□□ -1.47
PTPRK-210ENST00000415055 PITPNM2Q9BZ72 1349 aa5.85□□□□□ -1.47
PTPRK-210ENST00000415055 MANSC4A6NHS7 340 aaPredicted RBP5.85□□□□□ -1.47
PTPRK-210ENST00000415055 UFL1O94874 794 aa5.85□□□□□ -1.47
PTPRK-210ENST00000415055 FARP2O94887 1054 aaPredicted RBP5.85□□□□□ -1.47
PTPRK-210ENST00000415055 ANXA1P04083 346 aa5.85□□□□□ -1.47
PTPRK-210ENST00000415055 NEFMP07197 916 aa5.85□□□□□ -1.47
PTPRK-210ENST00000415055 U2AF1L5P0DN76 240 aaPredicted RBP5.85□□□□□ -1.47
PTPRK-210ENST00000415055 EIF2S2P20042 333 aaKnown RBP5.85□□□□□ -1.47
PTPRK-210ENST00000415055 CD96P40200 585 aa5.85□□□□□ -1.47
PTPRK-210ENST00000415055 U2AF1Q01081 240 aaKnown RBP eCLIP5.85□□□□□ -1.47
PTPRK-210ENST00000415055 AIMP1Q12904 312 aaKnown RBP5.85□□□□□ -1.47
PTPRK-210ENST00000415055 RAB33AQ14088 237 aa5.85□□□□□ -1.47
PTPRK-210ENST00000415055 OTUD7BQ6GQQ9 843 aa5.85□□□□□ -1.47
PTPRK-210ENST00000415055 FBXL19Q6PCT2 694 aa5.85□□□□□ -1.47
PTPRK-210ENST00000415055 SLITRK4Q8IW52 837 aa5.85□□□□□ -1.47
PTPRK-210ENST00000415055 LRRN4CLQ8ND94 238 aa5.85□□□□□ -1.47
PTPRK-210ENST00000415055 OR6P1Q8NGX9 317 aa5.85□□□□□ -1.47
PTPRK-210ENST00000415055 GRIN3AQ8TCU5 1115 aa5.85□□□□□ -1.47
PTPRK-210ENST00000415055 TMEM40Q8WWA1 233 aa5.85□□□□□ -1.47
PTPRK-210ENST00000415055 EAF1Q96JC9 268 aaPredicted RBP5.85□□□□□ -1.47
PTPRK-210ENST00000415055 CFAP53Q96M91 514 aa5.85□□□□□ -1.47
PTPRK-210ENST00000415055 LRRC3Q9BY71 257 aa5.85□□□□□ -1.47
PTPRK-210ENST00000415055 TRIM55Q9BYV6 548 aa5.85□□□□□ -1.47
PTPRK-210ENST00000415055 PRKAG3Q9UGI9 489 aa5.85□□□□□ -1.47
PTPRK-210ENST00000415055 PLAGL2Q9UPG8 496 aa5.85□□□□□ -1.47
PTPRK-210ENST00000415055 SPEF2Q9C093 1822 aa5.85□□□□□ -1.47
PTPRK-210ENST00000415055 TTC28Q96AY4 2481 aa5.85□□□□□ -1.47
PTPRK-210ENST00000415055 LAMA3Q16787 3333 aa5.84□□□□□ -1.47
PTPRK-210ENST00000415055 ENPP3O14638 875 aa5.84□□□□□ -1.47
PTPRK-210ENST00000415055 KLF4O43474 513 aa5.84□□□□□ -1.47
PTPRK-210ENST00000415055 PF4P02776 101 aa5.84□□□□□ -1.47
PTPRK-210ENST00000415055 IMPDH2P12268 514 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms