RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 ZNF579Q8NAF0 562 aaKnown RBP10.86□□□□□ -0.67
SMPD4-203ENST00000412570 LENG9Q96B70 501 aa10.86□□□□□ -0.67
SMPD4-203ENST00000412570 AGTPBP1Q9UPW5 1226 aa10.86□□□□□ -0.67
SMPD4-203ENST00000412570 IGF2BP3O00425 579 aaKnown RBP eCLIP10.86□□□□□ -0.67
SMPD4-203ENST00000412570 TBC1D8O95759 1140 aa10.86□□□□□ -0.67
SMPD4-203ENST00000412570 PLA2G4BP0C869 781 aa10.86□□□□□ -0.67
SMPD4-203ENST00000412570 AP3B2Q13367 1082 aa10.86□□□□□ -0.67
SMPD4-203ENST00000412570 CCDC34Q96HJ3 373 aa10.86□□□□□ -0.67
SMPD4-203ENST00000412570 PCMTD1Q96MG8 357 aaPredicted RBP10.86□□□□□ -0.67
SMPD4-203ENST00000412570 FOCADQ5VW36 1801 aa10.86□□□□□ -0.67
SMPD4-203ENST00000412570 ARFGEF1Q9Y6D6 1849 aa10.86□□□□□ -0.67
SMPD4-203ENST00000412570 A0A0G2JLL6 359 aaPredicted RBP10.86□□□□□ -0.67
SMPD4-203ENST00000412570 NLRP12P59046 1061 aa10.86□□□□□ -0.67
SMPD4-203ENST00000412570 UGCGQ16739 394 aa10.86□□□□□ -0.67
SMPD4-203ENST00000412570 PRRT2Q7Z6L0 340 aaPredicted RBP10.86□□□□□ -0.67
SMPD4-203ENST00000412570 LXNQ9BS40 222 aa10.86□□□□□ -0.67
SMPD4-203ENST00000412570 FUCA2Q9BTY2 467 aa10.86□□□□□ -0.67
SMPD4-203ENST00000412570 SUGCTQ9HAC7 445 aa10.86□□□□□ -0.67
SMPD4-203ENST00000412570 hCG_1984214I3L0E3 225 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 CTAGE5O15320 804 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 CSDE1O75534 798 aaKnown RBP10.85□□□□□ -0.67
SMPD4-203ENST00000412570 TRPA1O75762 1119 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 HARSP12081 509 aaKnown RBP10.85□□□□□ -0.67
SMPD4-203ENST00000412570 ERVK-9P63128 1117 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 ERVK-24P63145 666 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 PPIL2Q13356 520 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 PPP1R18Q6NYC8 613 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 LBX2Q6XYB7 198 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 ZNF713Q8N859 430 aaPredicted RBP10.85□□□□□ -0.67
SMPD4-203ENST00000412570 NSUN6Q8TEA1 469 aaKnown RBP10.85□□□□□ -0.67
SMPD4-203ENST00000412570 GLG1Q92896 1179 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 TRIM47Q96LD4 638 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 MXRA8Q9BRK3 442 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 TEKT3Q9BXF9 490 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 EHMT1Q9H9B1 1298 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 MLXIPQ9HAP2 919 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 GABBR1Q9UBS5 961 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 ZNF646O15015 1829 aaPredicted RBP10.85□□□□□ -0.67
SMPD4-203ENST00000412570 ITGBL1O95965 494 aaPredicted RBP10.85□□□□□ -0.67
SMPD4-203ENST00000412570 PRCPP42785 496 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 PMS1P54277 932 aaKnown RBP10.85□□□□□ -0.67
SMPD4-203ENST00000412570 SP2Q02086 613 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 MTERF2Q49AM1 385 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 SPRYD7Q5W111 196 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 PDXDC2PQ6P474 469 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 ELMO3Q96BJ8 720 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 FAM84AQ96KN4 292 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 ARHGAP39Q9C0H5 1083 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 NAT10Q9H0A0 1025 aaKnown RBP10.85□□□□□ -0.67
SMPD4-203ENST00000412570 BLOC1S4Q9NUP1 217 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 DNM3Q9UQ16 869 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 NKRFO15226 690 aaKnown RBP eCLIP10.85□□□□□ -0.678e-7■■□□□ 14.5
SMPD4-203ENST00000412570 CLIC2O15247 247 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 CYP2C19P33261 490 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 CDR1P51861 262 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 KCNA1Q09470 495 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 LRMPQ12912 555 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 ZC2HC1CQ53FD0 456 aaPredicted RBP10.85□□□□□ -0.67
SMPD4-203ENST00000412570 XKR9Q5GH70 373 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 ARL6IP4Q66PJ3 421 aaKnown RBP10.85□□□□□ -0.67
SMPD4-203ENST00000412570 FASTKD5Q7L8L6 764 aaKnown RBP10.85□□□□□ -0.67
SMPD4-203ENST00000412570 TRAPPC12Q8WVT3 735 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 RUSC1Q9BVN2 902 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 TMX1Q9H3N1 280 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 TAB2Q9NYJ8 693 aa10.85□□□□□ -0.67
SMPD4-203ENST00000412570 ASTN1O14525 1302 aa10.84□□□□□ -0.67
SMPD4-203ENST00000412570 IGLV3-22A0A075B6J6 115 aa10.84□□□□□ -0.67
SMPD4-203ENST00000412570 PRPF6O94906 941 aaKnown RBP10.84□□□□□ -0.67
SMPD4-203ENST00000412570 USP11P51784 963 aa10.84□□□□□ -0.67
SMPD4-203ENST00000412570 GPAT2Q6NUI2 795 aa10.84□□□□□ -0.67
SMPD4-203ENST00000412570 TMC6Q7Z403 805 aa10.84□□□□□ -0.67
SMPD4-203ENST00000412570 DHX40Q8IX18 779 aaKnown RBP10.84□□□□□ -0.67
SMPD4-203ENST00000412570 MYCT1Q8N699 235 aa10.84□□□□□ -0.67
SMPD4-203ENST00000412570 ETNPPLQ8TBG4 499 aa10.84□□□□□ -0.67
SMPD4-203ENST00000412570 NELFBQ8WX92 580 aa10.84□□□□□ -0.67
SMPD4-203ENST00000412570 SEPT9Q9UHD8 586 aaPredicted RBP10.84□□□□□ -0.67
SMPD4-203ENST00000412570 MYH7BA7E2Y1 1941 aa10.84□□□□□ -0.67
SMPD4-203ENST00000412570 SOWAHBA6NEL2 793 aa10.84□□□□□ -0.67
SMPD4-203ENST00000412570 CETPP11597 493 aa10.84□□□□□ -0.67
SMPD4-203ENST00000412570 ADORA2AP29274 412 aa10.84□□□□□ -0.67
SMPD4-203ENST00000412570 E2F4Q16254 413 aa10.84□□□□□ -0.67
SMPD4-203ENST00000412570 ERMNQ8TAM6 284 aa10.84□□□□□ -0.67
SMPD4-203ENST00000412570 RABGAP1Q9Y3P9 1069 aa10.84□□□□□ -0.67
SMPD4-203ENST00000412570 CCDC169A6NNP5 214 aa10.84□□□□□ -0.67
SMPD4-203ENST00000412570 NOP56O00567 594 aaKnown RBP10.84□□□□□ -0.67
SMPD4-203ENST00000412570 NMT1P30419 496 aaKnown RBP10.84□□□□□ -0.67
SMPD4-203ENST00000412570 FAM102BQ5T8I3 360 aa10.84□□□□□ -0.67
SMPD4-203ENST00000412570 PPP4R3AQ6IN85 833 aa10.84□□□□□ -0.67
SMPD4-203ENST00000412570 SAPCD2Q86UD0 394 aa10.84□□□□□ -0.67
SMPD4-203ENST00000412570 GPRC5AQ8NFJ5 357 aa10.84□□□□□ -0.67
SMPD4-203ENST00000412570 XPO4Q9C0E2 1151 aaKnown RBP10.84□□□□□ -0.67
SMPD4-203ENST00000412570 GGPS1O95749 300 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 CCNE2O96020 404 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 CCND2P30279 289 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 CCL14Q16627 93 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 CCDC186Q7Z3E2 898 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 CDR2LQ86X02 465 aaPredicted RBP10.83□□□□□ -0.68
SMPD4-203ENST00000412570 IGSF22Q8N9C0 903 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 TRIM9Q9C026 710 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 PANK4Q9NVE7 773 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms