RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 KIAA1683Q9H0B3 1180 aa-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 SERHL2Q9H4I8 314 aa-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 FLRT1Q9NZU1 646 aa-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 KIAA1522Q9P206 1035 aaPredicted RBP-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 CLIP2Q9UDT6 1046 aa-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 MCM8Q9UJA3 840 aa-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 TCFL5Q9UL49 500 aa-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 MUC2Q02817 5179 aa-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 MAST4O15021 2626 aa-0.38□□□□□ -2.47
RNU4-88P-201ENST00000411220 SHISA3A0PJX4 238 aa-0.39□□□□□ -2.47
RNU4-88P-201ENST00000411220 UMODP07911 640 aa-0.39□□□□□ -2.47
RNU4-88P-201ENST00000411220 ITPKBP27987 946 aa-0.39□□□□□ -2.47
RNU4-88P-201ENST00000411220 SCNN1GP51170 649 aa-0.39□□□□□ -2.47
RNU4-88P-201ENST00000411220 PCBP3P57721 371 aaKnown RBP-0.39□□□□□ -2.47
RNU4-88P-201ENST00000411220 EIF4G2P78344 907 aaKnown RBP eCLIP-0.39□□□□□ -2.47
RNU4-88P-201ENST00000411220 ADAM9Q13443 819 aa-0.39□□□□□ -2.47
RNU4-88P-201ENST00000411220 CCDC62Q6P9F0 684 aa-0.39□□□□□ -2.47
RNU4-88P-201ENST00000411220 FAM198BQ6UWH4 519 aa-0.39□□□□□ -2.47
RNU4-88P-201ENST00000411220 CD300LDQ6UXZ3 194 aa-0.39□□□□□ -2.47
RNU4-88P-201ENST00000411220 ZC3H18Q86VM9 953 aaKnown RBP-0.39□□□□□ -2.47
RNU4-88P-201ENST00000411220 FAM84BQ96KN1 310 aaPredicted RBP-0.39□□□□□ -2.47
RNU4-88P-201ENST00000411220 GJD4Q96KN9 370 aaPredicted RBP-0.39□□□□□ -2.47
RNU4-88P-201ENST00000411220 JMJD8Q96S16 334 aa-0.39□□□□□ -2.47
RNU4-88P-201ENST00000411220 ALOXE3Q9BYJ1 711 aa-0.39□□□□□ -2.47
RNU4-88P-201ENST00000411220 FBRSQ9HAH7 460 aa-0.39□□□□□ -2.47
RNU4-88P-201ENST00000411220 GPBP1L1Q9HC44 474 aaPredicted RBP-0.39□□□□□ -2.47
RNU4-88P-201ENST00000411220 GP6Q9HCN6 339 aa-0.39□□□□□ -2.47
RNU4-88P-201ENST00000411220 TRMT13Q9NUP7 481 aaKnown RBP-0.39□□□□□ -2.47
RNU4-88P-201ENST00000411220 RP1L1Q8IWN7 2480 aaPredicted RBP-0.39□□□□□ -2.47
RNU4-88P-201ENST00000411220 STAB1Q9NY15 2570 aa-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 FLG2Q5D862 2391 aaPredicted RBP-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 ITGB4P16144 1822 aa-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 NKG7Q16617 165 aa-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 BMT2Q1RMZ1 405 aa-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 PLEKHG4Q58EX7 1191 aa-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 RABL3Q5HYI8 236 aa-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 CCDC102BQ68D86 513 aa-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 ZNF772Q68DY9 489 aaPredicted RBP-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 ETV3LQ6ZN32 361 aa-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 RAPH1Q70E73 1250 aa-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 GPR155Q7Z3F1 870 aa-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 GDF7Q7Z4P5 450 aa-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 ZNF438Q7Z4V0 828 aa-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 C12orf40Q86WS4 652 aa-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 CMTR2Q8IYT2 770 aaKnown RBP-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 BMPERQ8N8U9 685 aa-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 NFATC2IPQ8NCF5 419 aa-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 HASPINQ8TF76 798 aa-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 PYGO2Q9BRQ0 406 aa-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 MKRN2Q9H000 416 aaKnown RBP-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 PDLIM7Q9NR12 457 aa-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 FBXL17Q9UF56 701 aa-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 RYR3Q15413 4870 aa-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 SYNE1Q8NF91 8797 aaKnown RBP-0.4□□□□□ -2.47
RNU4-88P-201ENST00000411220 AGRNO00468 2067 aa-0.41□□□□□ -2.47
RNU4-88P-201ENST00000411220 MANSC4A6NHS7 340 aaPredicted RBP-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 DCDC2CA8MYV0 355 aa-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 ZNF205O95201 554 aa-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 ZBTB7AO95365 584 aa-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 TOP3BO95985 862 aaKnown RBP-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 CST3P01034 146 aaPredicted RBP-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 HKR1P10072 659 aa-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 WT1P19544 449 aaPredicted RBP-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 MAN2A2P49641 1150 aa-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 LRMPQ12912 555 aa-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 EIF4EBP2Q13542 120 aaPredicted RBP-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 ZNF268Q14587 947 aaPredicted RBP-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 BBS9Q3SYG4 887 aa-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 PRAMEF13Q5VWM6 474 aa-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 TRMT10BQ6PF06 316 aaKnown RBP-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 C9orf47Q6ZRZ4 202 aa-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 Q6ZUG5 572 aa-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 FAM26EQ8N5C1 309 aa-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 PEX11GQ96HA9 241 aa-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 RXFP1Q9HBX9 757 aa-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 MSL2Q9HCI7 577 aa-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 ERVK13-1Q9NX77 482 aa-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 TRPS1Q9UHF7 1281 aa-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 ADAMTS1Q9UHI8 967 aa-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 DOPEY1Q5JWR5 2465 aa-0.41□□□□□ -2.48
RNU4-88P-201ENST00000411220 DHX57Q6P158 1386 aaKnown RBP-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 FAM221BA6H8Z2 402 aa-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 A8MU10 97 aa-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 SYT5O00445 386 aa-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 ZNF432O94892 652 aa-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 PRKCGP05129 697 aa-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 CSF2RBP32927 897 aa-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 GRIA4P48058 902 aa-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 HLCSP50747 726 aa-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 TCEA2Q15560 299 aa-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 Q6ZRM9 215 aa-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 ETFBKMTQ8IXQ9 262 aa-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 LINC00116Q8NCU8 138 aa-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 NLGN2Q8NFZ4 835 aa-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 CLIC6Q96NY7 704 aa-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 WDR11Q9BZH6 1224 aa-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 PLA2G12AQ9BZM1 189 aa-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 RSPH6AQ9H0K4 717 aa-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 C12orf65Q9H3J6 166 aaKnown RBP-0.42□□□□□ -2.48
RNU4-88P-201ENST00000411220 DLL3Q9NYJ7 618 aa-0.42□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms