RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 MAN2A1Q16706 1144 aa15.08■□□□□ 0.01
LIMS1-205ENST00000410093 FAM26FQ5R3K3 315 aa15.08■□□□□ 0.01
LIMS1-205ENST00000410093 DNAJC19Q96DA6 116 aa15.08■□□□□ 0.01
LIMS1-205ENST00000410093 NOC4LQ9BVI4 516 aaKnown RBP15.08■□□□□ 0.01
LIMS1-205ENST00000410093 PANK4Q9NVE7 773 aa15.08■□□□□ 0.01
LIMS1-205ENST00000410093 CLRN2A0PK11 232 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 FCER1AP12319 257 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 ZNF76P36508 570 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 ZBED6P86452 979 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 SPIRE1Q08AE8 756 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 TBC1D10BQ4KMP7 808 aaPredicted RBP15.07■□□□□ 0
LIMS1-205ENST00000410093 PRR16Q569H4 304 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 SAMD7Q7Z3H4 446 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 KRT26Q7Z3Y9 468 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 CCDC170Q8IYT3 715 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 DCPSQ96C86 337 aaKnown RBP15.07■□□□□ 0
LIMS1-205ENST00000410093 SEMA6BQ9H3T3 888 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 VEZTQ9HBM0 779 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 TUFT1Q9NNX1 390 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 SLC39A2Q9NP94 309 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 MYOZ2Q9NPC6 264 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 PGAP2Q9UHJ9 254 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 KIAA1024Q9UPX6 916 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 IDEP14735 1019 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 KRT83P78385 493 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 JAG1P78504 1218 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 COASYQ13057 564 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 RRP1BQ14684 758 aaKnown RBP15.07■□□□□ 0
LIMS1-205ENST00000410093 DEFB115Q30KQ5 88 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 USH1GQ495M9 461 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 VWA3BQ502W6 1294 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 TOGARAM2Q6ZUX3 1019 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 MCF2L2Q86YR7 1114 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 CREBRFQ8IUR6 639 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 SYT2Q8N9I0 419 aaPredicted RBP15.07■□□□□ 0
LIMS1-205ENST00000410093 TRPM4Q8TD43 1214 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 CPLX3Q8WVH0 158 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 LENG9Q96B70 501 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 NUDT12Q9BQG2 462 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 MAF1Q9H063 256 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 NUCKS1Q9H1E3 243 aaKnown RBP15.07■□□□□ 0
LIMS1-205ENST00000410093 KCND2Q9NZV8 630 aa15.07■□□□□ 0
LIMS1-205ENST00000410093 SHTN1A0MZ66 631 aa15.06■□□□□ 0
LIMS1-205ENST00000410093 WDR46O15213 610 aaKnown RBP15.06■□□□□ 0
LIMS1-205ENST00000410093 SLURP2P0DP57 97 aa15.06■□□□□ 0
LIMS1-205ENST00000410093 TRIM21P19474 475 aaKnown RBP15.06■□□□□ 0
LIMS1-205ENST00000410093 CYLC1P35663 651 aaPredicted RBP15.06■□□□□ 0
LIMS1-205ENST00000410093 SLC12A3P55017 1021 aa15.06■□□□□ 0
LIMS1-205ENST00000410093 MARSP56192 900 aaKnown RBP15.06■□□□□ 0
LIMS1-205ENST00000410093 GNG11P61952 73 aa15.06■□□□□ 0
LIMS1-205ENST00000410093 GHRHRQ02643 423 aa15.06■□□□□ 0
LIMS1-205ENST00000410093 PPP2R3AQ06190 1150 aa15.06■□□□□ 0
LIMS1-205ENST00000410093 GOLGA8FQ08AF8 430 aa15.06■□□□□ 0
LIMS1-205ENST00000410093 NCBP1Q09161 790 aaKnown RBP15.06■□□□□ 0
LIMS1-205ENST00000410093 GOLGA8DPQ0D2H9 430 aa15.06■□□□□ 0
LIMS1-205ENST00000410093 MEA1Q16626 185 aa15.06■□□□□ 0
LIMS1-205ENST00000410093 SHROOM1Q2M3G4 852 aaPredicted RBP15.06■□□□□ 0
LIMS1-205ENST00000410093 KIF4BQ2VIQ3 1234 aa15.06■□□□□ 0
LIMS1-205ENST00000410093 EDRF1Q3B7T1 1238 aa15.06■□□□□ 0
LIMS1-205ENST00000410093 FAM83BQ5T0W9 1011 aa15.06■□□□□ 0
LIMS1-205ENST00000410093 PAXIP1Q6ZW49 1069 aaPredicted RBP15.06■□□□□ 0
LIMS1-205ENST00000410093 DYMQ7RTS9 669 aa15.06■□□□□ 0
LIMS1-205ENST00000410093 TXLNBQ8N3L3 684 aa15.06■□□□□ 0
LIMS1-205ENST00000410093 EHBP1Q8NDI1 1231 aa15.06■□□□□ 0
LIMS1-205ENST00000410093 WDR11Q9BZH6 1224 aa15.06■□□□□ 0
LIMS1-205ENST00000410093 FAM184BQ9ULE4 1060 aa15.06■□□□□ 0
LIMS1-205ENST00000410093 SOWAHDA6NJG2 315 aa15.05■□□□□ -0
LIMS1-205ENST00000410093 TRAF5O00463 557 aa15.05■□□□□ -0
LIMS1-205ENST00000410093 WNT10BO00744 389 aa15.05■□□□□ -0
LIMS1-205ENST00000410093 OPLAHO14841 1288 aa15.05■□□□□ -0
LIMS1-205ENST00000410093 IPO7O95373 1038 aaKnown RBP15.05■□□□□ -0
LIMS1-205ENST00000410093 GAP43P17677 238 aa15.05■□□□□ -0
LIMS1-205ENST00000410093 CYP11B2P19099 503 aa15.05■□□□□ -0
LIMS1-205ENST00000410093 HNRNPH3P31942 346 aaKnown RBP15.05■□□□□ -0
LIMS1-205ENST00000410093 ECE1P42892 770 aa15.05■□□□□ -0
LIMS1-205ENST00000410093 HIRAP54198 1017 aaPredicted RBP15.05■□□□□ -0
LIMS1-205ENST00000410093 PPP2R5CQ13362 524 aa15.05■□□□□ -0
LIMS1-205ENST00000410093 ARHGAP29Q52LW3 1261 aa15.05■□□□□ -0
LIMS1-205ENST00000410093 RAD9BQ6WBX8 426 aa15.05■□□□□ -0
LIMS1-205ENST00000410093 NIPA1Q7RTP0 329 aa15.05■□□□□ -0
LIMS1-205ENST00000410093 GPBP1Q86WP2 473 aa15.05■□□□□ -0
LIMS1-205ENST00000410093 NEK9Q8TD19 979 aa15.05■□□□□ -0
LIMS1-205ENST00000410093 GLIS2Q9BZE0 524 aaPredicted RBP15.05■□□□□ -0
LIMS1-205ENST00000410093 TTYH3Q9C0H2 523 aa15.05■□□□□ -0
LIMS1-205ENST00000410093 ZNF408Q9H9D4 720 aa15.05■□□□□ -0
LIMS1-205ENST00000410093 EPN1Q9Y6I3 576 aaPredicted RBP15.05■□□□□ -0
LIMS1-205ENST00000410093 RBBP6Q7Z6E9 1792 aaKnown RBP15.04■□□□□ -0
LIMS1-205ENST00000410093 TTC26A0AVF1 554 aa15.04■□□□□ -0
LIMS1-205ENST00000410093 EFCAB8A8MWE9 144 aa15.04■□□□□ -0
LIMS1-205ENST00000410093 B4DLN1 442 aa15.04■□□□□ -0
LIMS1-205ENST00000410093 PES1O00541 588 aaKnown RBP15.04■□□□□ -0
LIMS1-205ENST00000410093 MSH4O15457 936 aa15.04■□□□□ -0
LIMS1-205ENST00000410093 CTNND1O60716 968 aaKnown RBP15.04■□□□□ -0
LIMS1-205ENST00000410093 CELF2O95319 508 aaKnown RBP15.04■□□□□ -0
LIMS1-205ENST00000410093 ICAM1P05362 532 aa15.04■□□□□ -0
LIMS1-205ENST00000410093 KRT18P05783 430 aaKnown RBP15.04■□□□□ -0
LIMS1-205ENST00000410093 MAP3K9P80192 1104 aa15.04■□□□□ -0
LIMS1-205ENST00000410093 RBM10P98175 930 aaKnown RBP15.04■□□□□ -0
LIMS1-205ENST00000410093 ECM1Q16610 540 aa15.04■□□□□ -0
LIMS1-205ENST00000410093 ZCWPW2Q504Y3 356 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms