RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 TUBB4AP04350 444 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 PHKG2P15735 406 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 SLC16A2P36021 539 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 ARL4DP49703 201 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 NCLNQ969V3 563 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 TESK2Q96S53 571 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 TLK1Q9UKI8 766 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 ZNF804BA4D1E1 1349 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 U2AF2P26368 475 aaKnown RBP eCLIP12.14□□□□□ -0.477e-7■■■□□ 16.9
PRPF40A-202ENST00000410080 BASP1P80723 227 aaKnown RBP12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 MLKLQ8NB16 471 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 ZFYVE19Q96K21 471 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 POLR3CQ9BUI4 534 aaPredicted RBP12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 COL4A3BPQ9Y5P4 624 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 ABCC2Q92887 1545 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 SERTAD1Q9UHV2 236 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 TRPC5Q9UL62 973 aaPredicted RBP12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 NFE2L3Q9Y4A8 694 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 SERPIND1P05546 499 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 TMTC3Q6ZXV5 915 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 TMTC1Q8IUR5 882 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 ZNF341Q9BYN7 854 aa12.14□□□□□ -0.47
PRPF40A-202ENST00000410080 HSPD1P10809 573 aaKnown RBP12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 RAP1GDS1P52306 607 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 MFAP3P55082 362 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 OCRLQ01968 901 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 TAF11Q15544 211 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 TRIML1Q8N9V2 468 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 BTN2A2Q8WVV5 523 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 INTS4Q96HW7 963 aaKnown RBP12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 GREM2Q9H772 168 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 KDM2BQ8NHM5 1336 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 A0A1B0GUA9 196 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 CLIC2O15247 247 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 SNX2O60749 519 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 OR52Z1P0C646 297 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 PIP4K2CQ8TBX8 421 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 ATG3Q9NT62 314 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 GTPBP10A4D1E9 387 aaKnown RBP12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 TUBBP07437 444 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 IFNL3Q8IZI9 196 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 C17orf53Q8N3J3 647 aaPredicted RBP12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 EPAS1Q99814 870 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 E5RI56 91 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 PAMP19021 973 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 G3BP2Q9UN86 482 aaKnown RBP12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 RBBP7Q16576 425 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 EXOC3L4Q17RC7 722 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 JPH2Q9BR39 696 aaPredicted RBP12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 CBX8Q9HC52 389 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 PSDA5PKW4 1024 aaPredicted RBP12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 PRPSAP2O60256 369 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 ANP32DO95626 131 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 ADORA1P30542 326 aa12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 ZC3H12BQ5HYM0 836 aaKnown RBP12.13□□□□□ -0.47
PRPF40A-202ENST00000410080 KIAA1755Q5JYT7 1200 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 PCGF5Q86SE9 256 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 ZBTB38Q8NAP3 1195 aaPredicted RBP12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 ZWILCHQ9H900 591 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 INTUQ9ULD6 942 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 OR6B3Q8NGW1 331 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 TBK1Q9UHD2 729 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 FBXL5Q9UKA1 691 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 WDR91A4D1P6 747 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 ZSCAN9O15535 394 aaPredicted RBP12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 IFNA8P32881 189 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 TEX12Q9BXU0 123 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 CFAP69A5D8W1 941 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 EIF3CLB5ME19 914 aaKnown RBP12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 ARMCX2Q7L311 632 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 EIF3CQ99613 913 aaKnown RBP12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 LARSQ9P2J5 1176 aaKnown RBP12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 TRPA1O75762 1119 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 ASAP1Q9ULH1 1129 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 FAN1Q9Y2M0 1017 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 SAR1BQ9Y6B6 198 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 MYO1FO00160 1098 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 DNAJC8O75937 253 aaPredicted RBP12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 ANKRD20A4Q4UJ75 823 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 ANKRD20A8PQ5CZ79 823 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 ANKRD20A2Q5SQ80 823 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 ANKRD20A1Q5TYW2 823 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 MCTP2Q6DN12 878 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 RAD18Q9NS91 495 aa12.12□□□□□ -0.47
PRPF40A-202ENST00000410080 SGSM2O43147 1006 aa12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 TMCC1O94876 653 aa12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 CCDC85BQ15834 202 aaPredicted RBP12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 GSDMAQ96QA5 445 aa12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 PASKQ96RG2 1323 aa12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 KRT1P04264 644 aa12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 NT5C1BQ96P26 610 aa12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 A0A0D9SFI3 127 aa12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 NPM3O75607 178 aaKnown RBP12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 RPN1P04843 607 aaKnown RBP12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 RASSF7Q02833 373 aa12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 THEMIS2Q5TEJ8 643 aa12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 GPR101Q96P66 508 aaPredicted RBP12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 NKX1-1Q15270 411 aaPredicted RBP12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 TMED2Q15363 201 aa12.11□□□□□ -0.47
PRPF40A-202ENST00000410080 ZKSCAN5Q9Y2L8 839 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms