RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 RDH13Q8NBN7 331 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 ANKRD20A12PQ8NF67 263 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 OLIG1Q8TAK6 271 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 CPLX3Q8WVH0 158 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 P3H4Q92791 437 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 SECISBP2LQ93073 1101 aaKnown RBP3.48□□□□□ -1.85
CUL3-204ENST00000409777 P2RX5Q93086 422 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 ARL8AQ96BM9 186 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 AK8Q96MA6 479 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 ARMT1Q9H993 441 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 AGPAT5Q9NUQ2 364 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 NLRP2Q9NX02 1062 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 SALL4Q9UJQ4 1053 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 GUCA1BQ9UMX6 200 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 GDAQ9Y2T3 454 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 PCDHA13Q9Y5I0 950 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 CAPN6Q9Y6Q1 641 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 ZNF646O15015 1829 aaPredicted RBP3.48□□□□□ -1.85
CUL3-204ENST00000409777 FAM205AQ6ZU69 1335 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 A0A0G2JS52 829 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 HMGB1P1B2RPK0 211 aaPredicted RBP3.48□□□□□ -1.85
CUL3-204ENST00000409777 ENC1O14682 589 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 SLC26A4O43511 780 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 ATP9BO43861 1147 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 FAM107AO95990 144 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 GHRP10912 638 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 CYP19A1P11511 503 aaPredicted RBP3.48□□□□□ -1.85
CUL3-204ENST00000409777 SCG2P13521 617 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 LSP1P33241 339 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 USP8P40818 1118 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 GNGT1P63211 74 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 C2orf54Q08AI8 447 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 MTMR2Q13614 643 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 MTMR3Q13615 1198 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 RRP12Q5JTH9 1297 aaKnown RBP3.48□□□□□ -1.85
CUL3-204ENST00000409777 LRRC55Q6ZSA7 311 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 FAM114A1Q8IWE2 563 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 MAGEB6Q8N7X4 407 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 WHAMMQ8TF30 809 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 SCFD2Q8WU76 684 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 ESR2Q92731 530 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 CENPTQ96BT3 561 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 ZIM3Q96PE6 472 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 CRACR2AQ9BSW2 395 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 NACAP1Q9BZK3 213 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 EHD4Q9H223 541 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 TMBIM4Q9HC24 238 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 TCP11L1Q9NUJ3 509 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 GNL3LQ9NVN8 582 aaKnown RBP3.48□□□□□ -1.85
CUL3-204ENST00000409777 PCDHA4Q9UN74 947 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 DUSP10Q9Y6W6 482 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 TAF1P21675 1872 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 BICDL2A1A5D9 508 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 TRIM49BA6NDI0 452 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 LGR5O75473 907 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 DNAJC8O75937 253 aaPredicted RBP3.48□□□□□ -1.85
CUL3-204ENST00000409777 ANXA13P27216 316 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 CALML3P27482 149 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 SMARCA1P28370 1054 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 MDH1P40925 334 aaKnown RBP3.48□□□□□ -1.85
CUL3-204ENST00000409777 TNNT3P45378 269 aaPredicted RBP3.48□□□□□ -1.85
CUL3-204ENST00000409777 LMNB2Q03252 620 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 XRCC4Q13426 336 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 NAB2Q15742 525 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 HLFQ16534 295 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 CDC37Q16543 378 aaPredicted RBP3.48□□□□□ -1.85
CUL3-204ENST00000409777 GRIPAP1Q4V328 841 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 TNFAIP8L3Q5GJ75 292 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 MEI1Q5TIA1 1274 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 AGBL2Q5U5Z8 902 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 ANKRD40Q6AI12 368 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 PDXDC1Q6P996 788 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 LDHAL6AQ6ZMR3 332 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 FAM228AQ86W67 206 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 ANKRD18AQ8IVF6 992 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 GSPT2Q8IYD1 628 aaKnown RBP3.48□□□□□ -1.85
CUL3-204ENST00000409777 KIAA0895Q8NCT3 520 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 MYCBPAPQ8TBZ2 947 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 MICAL1Q8TDZ2 1067 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 ZNF473Q8WTR7 871 aaKnown RBP3.48□□□□□ -1.85
CUL3-204ENST00000409777 ZKSCAN4Q969J2 545 aaPredicted RBP3.48□□□□□ -1.85
CUL3-204ENST00000409777 FAM89AQ96GI7 184 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 CABS1Q96KC9 395 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 ATP6V1G3Q96LB4 118 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 FAM161BQ96MY7 647 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 SLC4A9Q96Q91 983 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 TUBGCP2Q9BSJ2 902 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 MMTAG2Q9BU76 263 aaKnown RBP3.48□□□□□ -1.85
CUL3-204ENST00000409777 TRIM9Q9C026 710 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 BLZF1Q9H2G9 400 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 SEMA6BQ9H3T3 888 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 DEF6Q9H4E7 631 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 CXorf56Q9H5V9 222 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 CCDC134Q9H6E4 229 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 ACTR5Q9H9F9 607 aaPredicted RBP3.48□□□□□ -1.85
CUL3-204ENST00000409777 KCNMB3Q9NPA1 279 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 TTC7AQ9ULT0 858 aaPredicted RBP3.48□□□□□ -1.85
CUL3-204ENST00000409777 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.48□□□□□ -1.85
CUL3-204ENST00000409777 TFR2Q9UP52 801 aa3.48□□□□□ -1.85
CUL3-204ENST00000409777 MYH10P35580 1976 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms