RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 RPS12P25398 132 aaKnown RBP22.35■■□□□ 1.17
USP39-204ENST00000409766 PTGER2P43116 358 aa22.35■■□□□ 1.17
USP39-204ENST00000409766 LDHDQ86WU2 507 aa22.35■■□□□ 1.17
USP39-204ENST00000409766 ATRIPQ8WXE1 791 aa22.35■■□□□ 1.17
USP39-204ENST00000409766 CHP1Q99653 195 aa22.35■■□□□ 1.17
USP39-204ENST00000409766 TSG101Q99816 390 aa22.35■■□□□ 1.17
USP39-204ENST00000409766 WDR18Q9BV38 432 aa22.35■■□□□ 1.17
USP39-204ENST00000409766 ZNF341Q9BYN7 854 aa22.35■■□□□ 1.17
USP39-204ENST00000409766 LZTFL1Q9NQ48 299 aa22.35■■□□□ 1.17
USP39-204ENST00000409766 DNM3Q9UQ16 869 aa22.35■■□□□ 1.17
USP39-204ENST00000409766 CASQ1P31415 396 aa22.35■■□□□ 1.17
USP39-204ENST00000409766 KLK7P49862 253 aa22.35■■□□□ 1.17
USP39-204ENST00000409766 TNFAIP1Q13829 316 aa22.35■■□□□ 1.17
USP39-204ENST00000409766 VWA3BQ502W6 1294 aa22.35■■□□□ 1.17
USP39-204ENST00000409766 SYT2Q8N9I0 419 aaPredicted RBP22.35■■□□□ 1.17
USP39-204ENST00000409766 MEIS1O00470 390 aa22.34■■□□□ 1.17
USP39-204ENST00000409766 URI1O94763 535 aaPredicted RBP22.34■■□□□ 1.17
USP39-204ENST00000409766 TRIM21P19474 475 aaKnown RBP22.34■■□□□ 1.17
USP39-204ENST00000409766 INPP5BP32019 993 aa22.34■■□□□ 1.17
USP39-204ENST00000409766 CACNB1Q02641 598 aaPredicted RBP22.34■■□□□ 1.17
USP39-204ENST00000409766 HERC4Q5GLZ8 1057 aaPredicted RBP22.34■■□□□ 1.17
USP39-204ENST00000409766 FIGNQ5HY92 759 aa22.34■■□□□ 1.17
USP39-204ENST00000409766 FKBP15Q5T1M5 1219 aa22.34■■□□□ 1.17
USP39-204ENST00000409766 WDR59Q6PJI9 974 aa22.34■■□□□ 1.17
USP39-204ENST00000409766 ACRBPQ8NEB7 543 aa22.34■■□□□ 1.17
USP39-204ENST00000409766 UPF1Q92900 1129 aaKnown RBP eCLIP22.34■■□□□ 1.17
USP39-204ENST00000409766 POLR3CQ9BUI4 534 aaPredicted RBP22.34■■□□□ 1.17
USP39-204ENST00000409766 DEFB129Q9H1M3 183 aa22.34■■□□□ 1.17
USP39-204ENST00000409766 NDST4Q9H3R1 872 aa22.34■■□□□ 1.17
USP39-204ENST00000409766 AGPAT5Q9NUQ2 364 aa22.34■■□□□ 1.17
USP39-204ENST00000409766 TBC1D7Q9P0N9 293 aa22.34■■□□□ 1.17
USP39-204ENST00000409766 EML1O00423 815 aa22.33■■□□□ 1.17
USP39-204ENST00000409766 MAN2A1Q16706 1144 aa22.33■■□□□ 1.17
USP39-204ENST00000409766 FEZ1Q99689 392 aa22.33■■□□□ 1.17
USP39-204ENST00000409766 IRX2Q9BZI1 471 aaPredicted RBP22.33■■□□□ 1.17
USP39-204ENST00000409766 FKBP3Q00688 224 aaKnown RBP22.33■■□□□ 1.16
USP39-204ENST00000409766 RAD51AP2Q09MP3 1159 aa22.33■■□□□ 1.16
USP39-204ENST00000409766 PABPC4Q13310 644 aaKnown RBP eCLIP22.33■■□□□ 1.161e-7■■■□□ 14.9
USP39-204ENST00000409766 GIT2Q14161 759 aa22.33■■□□□ 1.16
USP39-204ENST00000409766 MEA1Q16626 185 aa22.33■■□□□ 1.16
USP39-204ENST00000409766 SAMD1Q6SPF0 538 aaPredicted RBP22.33■■□□□ 1.16
USP39-204ENST00000409766 OTOP1Q7RTM1 612 aa22.33■■□□□ 1.16
USP39-204ENST00000409766 EIF2AK1Q9BQI3 630 aaKnown RBP22.33■■□□□ 1.16
USP39-204ENST00000409766 A0A1W2PQJ5 194 aa22.32■■□□□ 1.16
USP39-204ENST00000409766 PSMD10O75832 226 aa22.32■■□□□ 1.16
USP39-204ENST00000409766 KRT18P05783 430 aaKnown RBP22.32■■□□□ 1.16
USP39-204ENST00000409766 ZBED6P86452 979 aa22.32■■□□□ 1.16
USP39-204ENST00000409766 PDCL2Q8N4E4 241 aa22.32■■□□□ 1.16
USP39-204ENST00000409766 KCTD17Q8N5Z5 321 aa22.32■■□□□ 1.16
USP39-204ENST00000409766 LRRN4CLQ8ND94 238 aa22.32■■□□□ 1.16
USP39-204ENST00000409766 SCFD1Q8WVM8 642 aa22.32■■□□□ 1.16
USP39-204ENST00000409766 SLC5A5Q92911 643 aa22.32■■□□□ 1.16
USP39-204ENST00000409766 EHMT1Q9H9B1 1298 aa22.32■■□□□ 1.16
USP39-204ENST00000409766 PPP1R1BQ9UD71 204 aaPredicted RBP22.32■■□□□ 1.16
USP39-204ENST00000409766 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.32■■□□□ 1.16
USP39-204ENST00000409766 EPN1Q9Y6I3 576 aaPredicted RBP22.32■■□□□ 1.16
USP39-204ENST00000409766 V9GYY5 206 aaPredicted RBP22.32■■□□□ 1.16
USP39-204ENST00000409766 ZNF536O15090 1300 aa22.31■■□□□ 1.16
USP39-204ENST00000409766 ICAM1P05362 532 aa22.31■■□□□ 1.16
USP39-204ENST00000409766 CYP4A11Q02928 519 aa22.31■■□□□ 1.16
USP39-204ENST00000409766 TSR1Q2NL82 804 aaKnown RBP22.31■■□□□ 1.16
USP39-204ENST00000409766 SIK3Q9Y2K2 1263 aa22.31■■□□□ 1.16
USP39-204ENST00000409766 NDUFA10O95299 355 aa22.31■■□□□ 1.16
USP39-204ENST00000409766 MAP3K9P80192 1104 aa22.31■■□□□ 1.16
USP39-204ENST00000409766 PPP2R5CQ13362 524 aa22.31■■□□□ 1.16
USP39-204ENST00000409766 CEP55Q53EZ4 464 aa22.31■■□□□ 1.16
USP39-204ENST00000409766 LPAR1Q92633 364 aa22.31■■□□□ 1.16
USP39-204ENST00000409766 IQCDQ96DY2 449 aa22.31■■□□□ 1.16
USP39-204ENST00000409766 AGBL1Q96MI9 1066 aa22.31■■□□□ 1.16
USP39-204ENST00000409766 HSD17B14Q9BPX1 270 aa22.31■■□□□ 1.16
USP39-204ENST00000409766 SLF1Q9BQI6 1058 aa22.31■■□□□ 1.16
USP39-204ENST00000409766 KIAA1683Q9H0B3 1180 aa22.31■■□□□ 1.16
USP39-204ENST00000409766 KCTD10Q9H3F6 313 aa22.31■■□□□ 1.16
USP39-204ENST00000409766 EMILIN3Q9NT22 766 aa22.31■■□□□ 1.16
USP39-204ENST00000409766 RBBP6Q7Z6E9 1792 aaKnown RBP22.31■■□□□ 1.16
USP39-204ENST00000409766 WDR46O15213 610 aaKnown RBP22.3■■□□□ 1.16
USP39-204ENST00000409766 KIF20AO95235 890 aa22.3■■□□□ 1.16
USP39-204ENST00000409766 GMPSP49915 693 aaPredicted RBP22.3■■□□□ 1.16
USP39-204ENST00000409766 UBXN2AP68543 259 aa22.3■■□□□ 1.16
USP39-204ENST00000409766 LRCH2Q5VUJ6 765 aa22.3■■□□□ 1.16
USP39-204ENST00000409766 MICALL2Q8IY33 904 aa22.3■■□□□ 1.16
USP39-204ENST00000409766 PRPF38AQ8NAV1 312 aaKnown RBP22.3■■□□□ 1.16
USP39-204ENST00000409766 PCMTD1Q96MG8 357 aaPredicted RBP22.3■■□□□ 1.16
USP39-204ENST00000409766 REEP2Q9BRK0 252 aa22.3■■□□□ 1.16
USP39-204ENST00000409766 GINM1Q9NU53 330 aa22.3■■□□□ 1.16
USP39-204ENST00000409766 RGL1Q9NZL6 768 aa22.3■■□□□ 1.16
USP39-204ENST00000409766 CD2APQ9Y5K6 639 aa22.3■■□□□ 1.16
USP39-204ENST00000409766 ASTN2O75129 1339 aaPredicted RBP22.3■■□□□ 1.16
USP39-204ENST00000409766 LTBP3Q9NS15 1303 aa22.3■■□□□ 1.16
USP39-204ENST00000409766 TRAF5O00463 557 aa22.3■■□□□ 1.16
USP39-204ENST00000409766 KIF5CO60282 957 aa22.3■■□□□ 1.16
USP39-204ENST00000409766 HSD17B4P51659 736 aa22.3■■□□□ 1.16
USP39-204ENST00000409766 SAMD7Q7Z3H4 446 aa22.3■■□□□ 1.16
USP39-204ENST00000409766 CEP63Q96MT8 703 aa22.3■■□□□ 1.16
USP39-204ENST00000409766 CCPG1Q9ULG6 757 aa22.3■■□□□ 1.16
USP39-204ENST00000409766 BCS1LQ9Y276 419 aa22.3■■□□□ 1.16
USP39-204ENST00000409766 REXO2Q9Y3B8 237 aaKnown RBP22.3■■□□□ 1.16
USP39-204ENST00000409766 COL4A3BPQ9Y5P4 624 aa22.3■■□□□ 1.16
USP39-204ENST00000409766 CTNND1O60716 968 aaKnown RBP22.29■■□□□ 1.16
USP39-204ENST00000409766 EYA4O95677 639 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms