RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 TROVE2P10155 538 aaKnown RBP eCLIP9.1□□□□□ -0.95
SCN9A-203ENST00000409672 RNF10Q8N5U6 811 aaKnown RBP9.1□□□□□ -0.95
SCN9A-203ENST00000409672 SIK2Q9H0K1 926 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 YEATS2Q9ULM3 1422 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 RAPGEF6Q8TEU7 1601 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 CAVIN2O95810 425 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 CHRNA5P30532 468 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 ARL4AP40617 200 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 MUM1Q2TAK8 710 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 NEUROG2Q9H2A3 272 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 NDFIP2Q9NV92 336 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 WDR17Q8IZU2 1322 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 FRMD3A2A2Y4 597 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 GOLGA8MH3BSY2 632 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 CFLARO15519 480 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 GFPT2O94808 682 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 CENPAP49450 140 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 LIG3P49916 1009 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 EXOC3L4Q17RC7 722 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 BABAM1Q9NWV8 329 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 KLF15Q9UIH9 416 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 KCNH4Q9UQ05 1017 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 ABCB11O95342 1321 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 EVI5O60447 810 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 IFNAR2P48551 515 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 ASPHQ12797 758 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 SYNE4Q8N205 404 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 LARSQ9P2J5 1176 aaKnown RBP9.1□□□□□ -0.95
SCN9A-203ENST00000409672 KRT1P04264 644 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 KRT10P13645 584 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 IMPG1Q17R60 797 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 TEKT4Q8WW24 435 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 SEPT8Q92599 483 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 CDKL2Q92772 493 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 ATP6V0A1Q93050 837 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 ABHD8Q96I13 439 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 TRAIPQ9BWF2 469 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 AMNQ9BXJ7 453 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.1□□□□□ -0.95
SCN9A-203ENST00000409672 ARHGEF10O15013 1369 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 GNA14O95837 355 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 RPN1P04843 607 aaKnown RBP9.1□□□□□ -0.95
SCN9A-203ENST00000409672 CIITAP33076 1130 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 PPP1R2P41236 205 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 PRR23CQ6ZRP0 262 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 FAM186BQ8IYM0 893 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 MSTO1Q9BUK6 570 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 FSD1LQ9BXM9 530 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 RAB17Q9H0T7 212 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 BAIAP2L1Q9UHR4 511 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 HEY1Q9Y5J3 304 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 CLIC4Q9Y696 253 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 ZSCAN9O15535 394 aaPredicted RBP9.1□□□□□ -0.95
SCN9A-203ENST00000409672 ZMYND10O75800 440 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 SCG2P13521 617 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 PHKG2P15735 406 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 EEF1B2P24534 225 aaKnown RBP9.1□□□□□ -0.95
SCN9A-203ENST00000409672 PTK2BQ14289 1009 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 ADCK2Q7Z695 626 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 C11orf74Q86VG3 221 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 NGRNQ9NPE2 291 aaKnown RBP9.1□□□□□ -0.95
SCN9A-203ENST00000409672 COL4A3BPQ9Y5P4 624 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 KITP10721 976 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 GRIK1P39086 918 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 SLMAPQ14BN4 828 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 SYCP2LQ5T4T6 812 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 CC2D2BQ6DHV5 1058 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 ASIC4Q96FT7 647 aa9.1□□□□□ -0.95
SCN9A-203ENST00000409672 MCF2LO15068 1137 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 FGAP02671 866 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 DCTPP1Q9H773 170 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 ORC6Q9Y5N6 252 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 UBA6A0AVT1 1052 aaPredicted RBP9.09□□□□□ -0.95
SCN9A-203ENST00000409672 K7ERI5 159 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 NDUFB5O43674 189 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 HSPD1P10809 573 aaKnown RBP9.09□□□□□ -0.95
SCN9A-203ENST00000409672 ARHGDIAP52565 204 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 TRIM14Q14142 442 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 CFAP61Q8NHU2 1237 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 KIAA0232Q92628 1395 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 GRAMD1CQ8IYS0 662 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 A0A0D9SFI3 127 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 PRPSAP2O60256 369 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 TRPA1O75762 1119 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 TTC4O95801 387 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 TMED2Q15363 201 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 ELF2Q15723 593 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 ZFYVE19Q96K21 471 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 NT5C1BQ96P26 610 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 ATG3Q9NT62 314 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 SUPT3HB4E1H0 165 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 GNAT1P11488 350 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 EHHADHQ08426 723 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 CCDC85BQ15834 202 aaPredicted RBP9.09□□□□□ -0.95
SCN9A-203ENST00000409672 TBCKQ8TEA7 893 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 SCHIP1Q9P0W5 487 aaPredicted RBP9.09□□□□□ -0.95
SCN9A-203ENST00000409672 AFF2P51816 1311 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 DFFAO00273 331 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 ANP32DO95626 131 aa9.09□□□□□ -0.95
SCN9A-203ENST00000409672 C10orf76Q5T2E6 689 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms