RNA–Protein interactions for RNA: ENST00000409598.8

SH3D19-203, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 5,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-203ENST00000409598 LTBP3Q9NS15 1303 aa8.23□□□□□ -1.09
SH3D19-203ENST00000409598 HUS1O60921 280 aa8.23□□□□□ -1.09
SH3D19-203ENST00000409598 NDUFB10O96000 172 aa8.23□□□□□ -1.09
SH3D19-203ENST00000409598 CYBBP04839 570 aa8.23□□□□□ -1.09
SH3D19-203ENST00000409598 GJB1P08034 283 aa8.23□□□□□ -1.09
SH3D19-203ENST00000409598 ERVK-9P63128 1117 aa8.23□□□□□ -1.09
SH3D19-203ENST00000409598 ERVK-24P63145 666 aa8.23□□□□□ -1.09
SH3D19-203ENST00000409598 RAB30Q15771 203 aa8.23□□□□□ -1.09
SH3D19-203ENST00000409598 ZSCAN23Q3MJ62 389 aa8.23□□□□□ -1.09
SH3D19-203ENST00000409598 ADALQ6DHV7 355 aa8.23□□□□□ -1.09
SH3D19-203ENST00000409598 MTRQ99707 1265 aa8.23□□□□□ -1.09
SH3D19-203ENST00000409598 UBR1Q8IWV7 1749 aa8.23□□□□□ -1.09
SH3D19-203ENST00000409598 EIF4E1BA6NMX2 242 aaKnown RBP8.23□□□□□ -1.09
SH3D19-203ENST00000409598 HBP1O60381 514 aa8.23□□□□□ -1.09
SH3D19-203ENST00000409598 BTG3Q14201 252 aaPredicted RBP8.23□□□□□ -1.09
SH3D19-203ENST00000409598 C12orf60Q5U649 245 aa8.23□□□□□ -1.09
SH3D19-203ENST00000409598 STAMQ92783 540 aa8.23□□□□□ -1.09
SH3D19-203ENST00000409598 ASCC2Q9H1I8 757 aaPredicted RBP8.23□□□□□ -1.09
SH3D19-203ENST00000409598 CALCOCO1Q9P1Z2 691 aa8.23□□□□□ -1.09
SH3D19-203ENST00000409598 LSM7Q9UK45 103 aaKnown RBP8.23□□□□□ -1.09
SH3D19-203ENST00000409598 PIN4Q9Y237 131 aaKnown RBP8.23□□□□□ -1.09
SH3D19-203ENST00000409598 SNAP23O00161 211 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 AKR1B10O60218 316 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 MOCS3O95396 460 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 CAVIN2O95810 425 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 GNA14O95837 355 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 NR3C2P08235 984 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 PRKAR2AP13861 404 aaKnown RBP8.22□□□□□ -1.09
SH3D19-203ENST00000409598 PPP4CP60510 307 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 TMEM132BQ14DG7 1078 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 KRT40Q6A162 431 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 MRPL9Q9BYD2 267 aaKnown RBP8.22□□□□□ -1.09
SH3D19-203ENST00000409598 IFT122Q9HBG6 1241 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 LRRC4Q9HBW1 653 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 STRIP2Q9ULQ0 834 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 RWDD3Q9Y3V2 267 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 SLIT2O94813 1529 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 H7C4K7 107 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 EIF3JO75822 258 aaKnown RBP8.22□□□□□ -1.09
SH3D19-203ENST00000409598 TNNT1P13805 278 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 LACTBP83111 547 aaPredicted RBP8.22□□□□□ -1.09
SH3D19-203ENST00000409598 CYP4A11Q02928 519 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 MTX1Q13505 466 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 ANO1Q5XXA6 986 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 LEKR1Q6ZMV7 388 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 RYBPQ8N488 228 aaPredicted RBP8.22□□□□□ -1.09
SH3D19-203ENST00000409598 TRPM4Q8TD43 1214 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 TSPYL1Q9H0U9 437 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 EHD4Q9H223 541 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 ANTXR1Q9H6X2 564 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 SCAF8Q9UPN6 1271 aaKnown RBP8.22□□□□□ -1.09
SH3D19-203ENST00000409598 IPPQ9Y573 584 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 PCDHA10Q9Y5I2 948 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 GOLGA6CA6NDK9 693 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 GOLGA6BA6NDN3 693 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 TMCO5BA8MYB1 307 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 GOLGA6DP0CG33 693 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 ITGA4P13612 1032 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 KRT9P35527 623 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 SBK1Q52WX2 424 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 ZNF697Q5TEC3 545 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 TMC7Q7Z402 723 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 SNX21Q969T3 373 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 ZNF560Q96MR9 790 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 KIAA1683Q9H0B3 1180 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 GOLGA6AQ9NYA3 693 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 ZKSCAN5Q9Y2L8 839 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.22□□□□□ -1.09
SH3D19-203ENST00000409598 hCG_1642624A0A1W2PR95 340 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 PFDN6O15212 129 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 SNAP25P60880 206 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 HSP90B2PQ58FF3 399 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 IQSEC1Q6DN90 963 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 SREK1Q8WXA9 508 aaKnown RBP8.22□□□□□ -1.09
SH3D19-203ENST00000409598 ST7Q9NRC1 585 aa8.22□□□□□ -1.09
SH3D19-203ENST00000409598 ORC4O43929 436 aa8.21□□□□□ -1.09
SH3D19-203ENST00000409598 SEC24BO95487 1268 aa8.21□□□□□ -1.09
SH3D19-203ENST00000409598 CYP2D6P10635 497 aa8.21□□□□□ -1.09
SH3D19-203ENST00000409598 ZNF18P17022 549 aa8.21□□□□□ -1.09
SH3D19-203ENST00000409598 FLT3LGP49771 235 aa8.21□□□□□ -1.09
SH3D19-203ENST00000409598 EFNA5P52803 228 aa8.21□□□□□ -1.09
SH3D19-203ENST00000409598 OAZ1P54368 228 aa8.21□□□□□ -1.09
SH3D19-203ENST00000409598 ELAVL2Q12926 359 aaKnown RBP8.21□□□□□ -1.09
SH3D19-203ENST00000409598 RABL6Q3YEC7 729 aaPredicted RBP8.21□□□□□ -1.09
SH3D19-203ENST00000409598 DCUN1D2Q6PH85 259 aa8.21□□□□□ -1.09
SH3D19-203ENST00000409598 SLC44A5Q8NCS7 719 aa8.21□□□□□ -1.09
SH3D19-203ENST00000409598 PI4K2BQ8TCG2 481 aa8.21□□□□□ -1.09
SH3D19-203ENST00000409598 ZNF512BQ96KM6 892 aaPredicted RBP8.21□□□□□ -1.09
SH3D19-203ENST00000409598 FAM20AQ96MK3 541 aa8.21□□□□□ -1.09
SH3D19-203ENST00000409598 SH3GLB2Q9NR46 395 aa8.21□□□□□ -1.09
SH3D19-203ENST00000409598 EVA1BQ9NVM1 165 aa8.21□□□□□ -1.09
SH3D19-203ENST00000409598 PXDNQ92626 1479 aa8.21□□□□□ -1.09
SH3D19-203ENST00000409598 CYP2D7A0A087X1C5 515 aa8.21□□□□□ -1.1
SH3D19-203ENST00000409598 POTEB3A0JP26 581 aa8.21□□□□□ -1.1
SH3D19-203ENST00000409598 PSMC5P62195 406 aa8.21□□□□□ -1.1
SH3D19-203ENST00000409598 SNX17Q15036 470 aa8.21□□□□□ -1.1
SH3D19-203ENST00000409598 POTEBQ6S5H4 581 aa8.21□□□□□ -1.1
SH3D19-203ENST00000409598 RHPN2Q8IUC4 686 aa8.21□□□□□ -1.1
SH3D19-203ENST00000409598 TTC39CQ8N584 583 aa8.21□□□□□ -1.1
SH3D19-203ENST00000409598 TECP42680 631 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms