RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 GPR108Q9NPR9 543 aa11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 TLR7Q9NYK1 1049 aaKnown RBP11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 SERTAD1Q9UHV2 236 aa11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 LUC7L2Q9Y383 392 aaKnown RBP11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 HYOU1Q9Y4L1 999 aa11.7□□□□□ -0.54
NIF3L1-204ENST00000409357 GRID2IPA4D2P6 1211 aa11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 GOLGA6L10A6NI86 522 aa11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 B4DLN1 442 aa11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 ENC1O14682 589 aa11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 ORC4O43929 436 aa11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 PPP1R12BO60237 982 aaPredicted RBP11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 ZMYND10O75800 440 aa11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 AP1G2O75843 785 aa11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 HSPD1P10809 573 aaKnown RBP11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 PAFAH1B1P43034 410 aa11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 ATP1A2P50993 1020 aa11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 SEC24CP53992 1094 aa11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 C2orf54Q08AI8 447 aa11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 KRT31Q15323 416 aa11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 ACCSLQ4AC99 568 aa11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 LRRC24Q50LG9 513 aa11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 CST9Q5W186 159 aa11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 OTUD7BQ6GQQ9 843 aa11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 CCDC129Q6ZRS4 1044 aa11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 PODNQ7Z5L7 613 aa11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 GSPT2Q8IYD1 628 aaKnown RBP11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 GDAP1L1Q96MZ0 367 aa11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 ALG1Q9BT22 464 aa11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 IRAK4Q9NWZ3 460 aa11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 AATFQ9NY61 560 aaKnown RBP eCLIP11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 ZFATQ9P243 1243 aa11.69□□□□□ -0.54
NIF3L1-204ENST00000409357 USP17L3A6NCW0 530 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 USP17L4A6NCW7 530 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 TMEM88BA6NKF7 163 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 BHMG1C9JSJ3 638 aaPredicted RBP11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 H7C1D1 291 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 FOXN1O15353 648 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 SRGAP2O75044 1071 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 LCA5LO95447 670 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 RPSAP08865 295 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 IDEP14735 1019 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 RPS12P25398 132 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 HNRNPH3P31942 346 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 KIF5AQ12840 1032 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 MYO1EQ12965 1108 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 MTA1Q13330 715 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 TNNI3KQ59H18 835 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 DACT2Q5SW24 774 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 USP17L1Q7RTZ2 530 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 MAATS1Q7Z4T9 603 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 APBB1IPQ7Z5R6 666 aaPredicted RBP11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 STK11IPQ8N1F8 1099 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 CCDC63Q8NA47 563 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 WASF1Q92558 559 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 TBC1D31Q96DN5 1066 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 ZBTB10Q96DT7 871 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 STAMBPL1Q96FJ0 436 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 CCDC43Q96MW1 224 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 CHP1Q99653 195 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 RABEP2Q9H5N1 569 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 PAPOLBQ9NRJ5 636 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 CNNM1Q9NRU3 951 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 PGAP2Q9UHJ9 254 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 FPGT-TNNI3KV9GXZ4 949 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 NID2Q14112 1375 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 GPR75-ASB3A0A0A6YYF3 556 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 KLF18A0A0U1RQI7 1052 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 A0A1W2PQJ5 194 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 POLR2DO15514 142 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 USO1O60763 962 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 KRT14P02533 472 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 LINGO3P0C6S8 592 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 DRD4P21917 467 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 ZNF131P52739 623 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 MRPS35P82673 323 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 DPYDQ12882 1025 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 TCP11X2Q5H9J9 407 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 C8orf74Q6P047 294 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 WDR59Q6PJI9 974 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 SH2D3CQ8N5H7 860 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 ANKS4BQ8N8V4 417 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 CAPZA3Q96KX2 299 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 ZNF570Q96NI8 536 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 MMTAG2Q9BU76 263 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 COA1Q9GZY4 146 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 FOXP1Q9H334 677 aaPredicted RBP11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 DBNLQ9UJU6 430 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 SCAF8Q9UPN6 1271 aaKnown RBP11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 JAG2Q9Y219 1238 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 ASB3Q9Y575 518 aa11.68□□□□□ -0.54
NIF3L1-204ENST00000409357 CNTNAP1P78357 1384 aa11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 RASSF10A6NK89 507 aa11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 GOLGA8BA8MQT2 603 aa11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 ADM5C9JUS6 153 aa11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 RNF225M0QZC1 329 aaPredicted RBP11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 CES2O00748 559 aa11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 PJA2O43164 708 aa11.67□□□□□ -0.54
NIF3L1-204ENST00000409357 FLOT1O75955 427 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms