RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 TMC4Q7Z404 712 aa18.33■□□□□ 0.52
COL23A1-202ENST00000407622 TRIM58Q8NG06 486 aa18.33■□□□□ 0.52
COL23A1-202ENST00000407622 IQCDQ96DY2 449 aa18.33■□□□□ 0.52
COL23A1-202ENST00000407622 TSG101Q99816 390 aa18.33■□□□□ 0.52
COL23A1-202ENST00000407622 SWAP70Q9UH65 585 aa18.33■□□□□ 0.52
COL23A1-202ENST00000407622 JRKLQ9Y4A0 524 aa18.33■□□□□ 0.52
COL23A1-202ENST00000407622 ZC3H4Q9UPT8 1303 aaKnown RBP18.33■□□□□ 0.52
COL23A1-202ENST00000407622 ANKRD31Q8N7Z5 1873 aa18.32■□□□□ 0.52
COL23A1-202ENST00000407622 TARSL2A2RTX5 802 aaKnown RBP18.32■□□□□ 0.52
COL23A1-202ENST00000407622 USO1O60763 962 aaKnown RBP18.32■□□□□ 0.52
COL23A1-202ENST00000407622 NOL4O94818 638 aa18.32■□□□□ 0.52
COL23A1-202ENST00000407622 SLC1A4P43007 532 aa18.32■□□□□ 0.52
COL23A1-202ENST00000407622 MRPL12P52815 198 aaKnown RBP18.32■□□□□ 0.52
COL23A1-202ENST00000407622 HDAC7Q8WUI4 952 aa18.32■□□□□ 0.52
COL23A1-202ENST00000407622 RPGRIP1Q96KN7 1286 aa18.32■□□□□ 0.52
COL23A1-202ENST00000407622 PSD3Q9NYI0 1048 aa18.32■□□□□ 0.52
COL23A1-202ENST00000407622 PCDHA2Q9Y5H9 948 aa18.32■□□□□ 0.52
COL23A1-202ENST00000407622 COL4A3BPQ9Y5P4 624 aa18.32■□□□□ 0.52
COL23A1-202ENST00000407622 TLR2O60603 784 aa18.32■□□□□ 0.52
COL23A1-202ENST00000407622 TACC1O75410 805 aa18.32■□□□□ 0.52
COL23A1-202ENST00000407622 PDE6BP35913 854 aa18.32■□□□□ 0.52
COL23A1-202ENST00000407622 QRICH1Q2TAL8 776 aa18.32■□□□□ 0.52
COL23A1-202ENST00000407622 P2RX7Q99572 595 aaKnown RBP18.32■□□□□ 0.52
COL23A1-202ENST00000407622 CRACR2AQ9BSW2 395 aa18.32■□□□□ 0.52
COL23A1-202ENST00000407622 KCNQ5Q9NR82 932 aa18.32■□□□□ 0.52
COL23A1-202ENST00000407622 HPCAL4Q9UM19 191 aa18.32■□□□□ 0.52
COL23A1-202ENST00000407622 ATP6V0A2Q9Y487 856 aa18.32■□□□□ 0.52
COL23A1-202ENST00000407622 SYF2O95926 243 aaKnown RBP18.31■□□□□ 0.52
COL23A1-202ENST00000407622 FKBP3Q00688 224 aaKnown RBP18.31■□□□□ 0.52
COL23A1-202ENST00000407622 CCDC40Q4G0X9 1142 aa18.31■□□□□ 0.52
COL23A1-202ENST00000407622 GPATCH4Q5T3I0 446 aaKnown RBP18.31■□□□□ 0.52
COL23A1-202ENST00000407622 CACNA2D4Q7Z3S7 1137 aa18.31■□□□□ 0.52
COL23A1-202ENST00000407622 RIN2Q8WYP3 895 aaPredicted RBP18.31■□□□□ 0.52
COL23A1-202ENST00000407622 TRERF1Q96PN7 1200 aa18.31■□□□□ 0.52
COL23A1-202ENST00000407622 SIPA1L1O43166 1804 aa18.31■□□□□ 0.52
COL23A1-202ENST00000407622 PLA2G4BP0C869 781 aa18.31■□□□□ 0.52
COL23A1-202ENST00000407622 NPR1P16066 1061 aa18.31■□□□□ 0.52
COL23A1-202ENST00000407622 TAL1P17542 331 aaPredicted RBP18.31■□□□□ 0.52
COL23A1-202ENST00000407622 MAGEA1P43355 309 aa18.31■□□□□ 0.52
COL23A1-202ENST00000407622 SNAP25P60880 206 aa18.31■□□□□ 0.52
COL23A1-202ENST00000407622 RASSF7Q02833 373 aa18.31■□□□□ 0.52
COL23A1-202ENST00000407622 ZSCAN26Q16670 478 aa18.31■□□□□ 0.52
COL23A1-202ENST00000407622 HYIQ5T013 277 aa18.31■□□□□ 0.52
COL23A1-202ENST00000407622 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.31■□□□□ 0.52
COL23A1-202ENST00000407622 FAM71BQ8TC56 605 aa18.31■□□□□ 0.52
COL23A1-202ENST00000407622 OSBPL9Q96SU4 736 aa18.31■□□□□ 0.52
COL23A1-202ENST00000407622 ZC3H12CQ9C0D7 883 aaKnown RBP18.31■□□□□ 0.52
COL23A1-202ENST00000407622 LRRC27Q9C0I9 530 aa18.31■□□□□ 0.52
COL23A1-202ENST00000407622 PDGFDQ9GZP0 370 aaPredicted RBP18.31■□□□□ 0.52
COL23A1-202ENST00000407622 BUB1O43683 1085 aa18.3■□□□□ 0.52
COL23A1-202ENST00000407622 MED24O75448 989 aa18.3■□□□□ 0.52
COL23A1-202ENST00000407622 CCNI2Q6ZMN8 369 aaPredicted RBP18.3■□□□□ 0.52
COL23A1-202ENST00000407622 GPBP1Q86WP2 473 aa18.3■□□□□ 0.52
COL23A1-202ENST00000407622 SUGT1Q9Y2Z0 365 aa18.3■□□□□ 0.52
COL23A1-202ENST00000407622 MYO3BQ8WXR4 1341 aa18.3■□□□□ 0.52
COL23A1-202ENST00000407622 CYP11B2P19099 503 aa18.29■□□□□ 0.52
COL23A1-202ENST00000407622 TCP10Q12799 353 aa18.29■□□□□ 0.52
COL23A1-202ENST00000407622 TDRD12Q587J7 1177 aaKnown RBP18.29■□□□□ 0.52
COL23A1-202ENST00000407622 HSP90B2PQ58FF3 399 aa18.29■□□□□ 0.52
COL23A1-202ENST00000407622 SCFD1Q8WVM8 642 aa18.29■□□□□ 0.52
COL23A1-202ENST00000407622 LRRC1Q9BTT6 524 aa18.29■□□□□ 0.52
COL23A1-202ENST00000407622 LSM14BQ9BX40 385 aaKnown RBP18.29■□□□□ 0.52
COL23A1-202ENST00000407622 KCNMB3Q9NPA1 279 aa18.29■□□□□ 0.52
COL23A1-202ENST00000407622 DMGDHQ9UI17 866 aaKnown RBP18.29■□□□□ 0.52
COL23A1-202ENST00000407622 PCDHA1Q9Y5I3 950 aa18.29■□□□□ 0.52
COL23A1-202ENST00000407622 C10orf71Q711Q0 1435 aa18.29■□□□□ 0.52
COL23A1-202ENST00000407622 POTEFA5A3E0 1075 aa18.29■□□□□ 0.52
COL23A1-202ENST00000407622 POTEIP0CG38 1075 aa18.29■□□□□ 0.52
COL23A1-202ENST00000407622 GCFC2P16383 781 aaKnown RBP18.29■□□□□ 0.52
COL23A1-202ENST00000407622 MATR3P43243 847 aaKnown RBP eCLIP18.29■□□□□ 0.52
COL23A1-202ENST00000407622 ARSHQ5FYA8 562 aa18.29■□□□□ 0.52
COL23A1-202ENST00000407622 FAM83BQ5T0W9 1011 aa18.29■□□□□ 0.52
COL23A1-202ENST00000407622 POTEGQ6S5H5 508 aa18.29■□□□□ 0.52
COL23A1-202ENST00000407622 POTEEQ6S8J3 1075 aa18.29■□□□□ 0.52
COL23A1-202ENST00000407622 SELENOOQ9BVL4 669 aa18.29■□□□□ 0.52
COL23A1-202ENST00000407622 ANO3Q9BYT9 981 aa18.29■□□□□ 0.52
COL23A1-202ENST00000407622 PJA2O43164 708 aa18.28■□□□□ 0.52
COL23A1-202ENST00000407622 RNF40O75150 1001 aa18.28■□□□□ 0.52
COL23A1-202ENST00000407622 HLA-DOAP06340 250 aa18.28■□□□□ 0.52
COL23A1-202ENST00000407622 EEF2P13639 858 aaKnown RBP18.28■□□□□ 0.52
COL23A1-202ENST00000407622 AARSP49588 968 aaKnown RBP eCLIP18.28■□□□□ 0.52
COL23A1-202ENST00000407622 CASP5P51878 434 aa18.28■□□□□ 0.52
COL23A1-202ENST00000407622 POLR2FP61218 127 aaKnown RBP18.28■□□□□ 0.52
COL23A1-202ENST00000407622 HERC4Q5GLZ8 1057 aaPredicted RBP18.28■□□□□ 0.52
COL23A1-202ENST00000407622 KCTD10Q9H3F6 313 aa18.28■□□□□ 0.52
COL23A1-202ENST00000407622 FAM204AQ9H8W3 233 aa18.28■□□□□ 0.52
COL23A1-202ENST00000407622 VIPAS39Q9H9C1 493 aa18.28■□□□□ 0.52
COL23A1-202ENST00000407622 KDM3AQ9Y4C1 1321 aa18.28■□□□□ 0.52
COL23A1-202ENST00000407622 ALDH1B1P30837 517 aa18.28■□□□□ 0.52
COL23A1-202ENST00000407622 SLC7A5Q01650 507 aa18.28■□□□□ 0.52
COL23A1-202ENST00000407622 MAPK8IP2Q13387 824 aaPredicted RBP18.28■□□□□ 0.52
COL23A1-202ENST00000407622 CDC37Q16543 378 aaPredicted RBP18.28■□□□□ 0.52
COL23A1-202ENST00000407622 MAP9Q49MG5 647 aa18.28■□□□□ 0.52
COL23A1-202ENST00000407622 TRIM59Q8IWR1 403 aa18.28■□□□□ 0.52
COL23A1-202ENST00000407622 SPATA4Q8NEY3 305 aa18.28■□□□□ 0.52
COL23A1-202ENST00000407622 TEKT1Q969V4 418 aa18.28■□□□□ 0.52
COL23A1-202ENST00000407622 TLR10Q9BXR5 811 aa18.28■□□□□ 0.52
COL23A1-202ENST00000407622 NT5C3AQ9H0P0 336 aa18.28■□□□□ 0.52
COL23A1-202ENST00000407622 MED4Q9NPJ6 270 aa18.28■□□□□ 0.52
COL23A1-202ENST00000407622 CEP72Q9P209 647 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms