RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 RBM46Q8TBY0 533 aaKnown RBP16.9■□□□□ 0.3
LIMK2-204ENST00000406516 ZNF408Q9H9D4 720 aa16.9■□□□□ 0.3
LIMK2-204ENST00000406516 LRWD1Q9UFC0 647 aa16.9■□□□□ 0.3
LIMK2-204ENST00000406516 EIF3CLB5ME19 914 aaKnown RBP16.9■□□□□ 0.3
LIMK2-204ENST00000406516 GRB10Q13322 594 aa16.9■□□□□ 0.3
LIMK2-204ENST00000406516 PRKG1Q13976 671 aa16.9■□□□□ 0.3
LIMK2-204ENST00000406516 COA7Q96BR5 231 aa16.9■□□□□ 0.3
LIMK2-204ENST00000406516 EIF3CQ99613 913 aaKnown RBP16.9■□□□□ 0.3
LIMK2-204ENST00000406516 PPP2R3BQ9Y5P8 575 aa16.9■□□□□ 0.3
LIMK2-204ENST00000406516 ATRNL1Q5VV63 1379 aa16.89■□□□□ 0.29
LIMK2-204ENST00000406516 SLC37A4O43826 429 aa16.89■□□□□ 0.29
LIMK2-204ENST00000406516 PLEKP08567 350 aaPredicted RBP16.89■□□□□ 0.29
LIMK2-204ENST00000406516 PAPD7Q5XG87 772 aaKnown RBP16.89■□□□□ 0.29
LIMK2-204ENST00000406516 CCDC170Q8IYT3 715 aa16.89■□□□□ 0.29
LIMK2-204ENST00000406516 CCDC102AQ96A19 550 aa16.89■□□□□ 0.29
LIMK2-204ENST00000406516 CDK5RAP3Q96JB5 506 aa16.89■□□□□ 0.29
LIMK2-204ENST00000406516 DHX36Q9H2U1 1008 aaKnown RBP16.89■□□□□ 0.29
LIMK2-204ENST00000406516 BLOC1S4Q9NUP1 217 aa16.89■□□□□ 0.29
LIMK2-204ENST00000406516 CDK5RAP2Q96SN8 1893 aa16.89■□□□□ 0.29
LIMK2-204ENST00000406516 MYMKA6NI61 221 aa16.89■□□□□ 0.29
LIMK2-204ENST00000406516 TDP2O95551 362 aa16.89■□□□□ 0.29
LIMK2-204ENST00000406516 ERCC3P19447 782 aa16.89■□□□□ 0.29
LIMK2-204ENST00000406516 WDR93Q6P2C0 686 aa16.89■□□□□ 0.29
LIMK2-204ENST00000406516 LRRC47Q8N1G4 583 aaKnown RBP16.89■□□□□ 0.29
LIMK2-204ENST00000406516 CAGE1Q8TC20 777 aa16.89■□□□□ 0.29
LIMK2-204ENST00000406516 EXOC4Q96A65 974 aa16.89■□□□□ 0.29
LIMK2-204ENST00000406516 ERGIC2Q96RQ1 377 aa16.89■□□□□ 0.29
LIMK2-204ENST00000406516 FAM207AQ9NSI2 230 aaPredicted RBP16.89■□□□□ 0.29
LIMK2-204ENST00000406516 POTEMA6NI47 508 aa16.88■□□□□ 0.29
LIMK2-204ENST00000406516 LRRIQ3A6PVS8 624 aaPredicted RBP16.88■□□□□ 0.29
LIMK2-204ENST00000406516 ZNF185O15231 689 aa16.88■□□□□ 0.29
LIMK2-204ENST00000406516 TUBBP07437 444 aa16.88■□□□□ 0.29
LIMK2-204ENST00000406516 PPP1R2P41236 205 aa16.88■□□□□ 0.29
LIMK2-204ENST00000406516 USP14P54578 494 aa16.88■□□□□ 0.29
LIMK2-204ENST00000406516 CLEC10AQ8IUN9 316 aa16.88■□□□□ 0.29
LIMK2-204ENST00000406516 CCDC42Q96M95 316 aa16.88■□□□□ 0.29
LIMK2-204ENST00000406516 PNMA5Q96PV4 448 aa16.88■□□□□ 0.29
LIMK2-204ENST00000406516 PI4KBQ9UBF8 816 aa16.88■□□□□ 0.29
LIMK2-204ENST00000406516 FAN1Q9Y2M0 1017 aa16.88■□□□□ 0.29
LIMK2-204ENST00000406516 EPHB6O15197 1021 aa16.88■□□□□ 0.29
LIMK2-204ENST00000406516 PHACTR2O75167 634 aa16.88■□□□□ 0.29
LIMK2-204ENST00000406516 PDHBP11177 359 aa16.88■□□□□ 0.29
LIMK2-204ENST00000406516 IDEP14735 1019 aa16.88■□□□□ 0.29
LIMK2-204ENST00000406516 CST9Q5W186 159 aa16.88■□□□□ 0.29
LIMK2-204ENST00000406516 ZNF662Q6ZS27 426 aa16.88■□□□□ 0.29
LIMK2-204ENST00000406516 LARP4BQ92615 738 aaKnown RBP16.88■□□□□ 0.29
LIMK2-204ENST00000406516 MTMR9Q96QG7 549 aa16.88■□□□□ 0.29
LIMK2-204ENST00000406516 SSC5DA1L4H1 1573 aa16.87■□□□□ 0.29
LIMK2-204ENST00000406516 ZNF263O14978 683 aa16.87■□□□□ 0.29
LIMK2-204ENST00000406516 KIF5AQ12840 1032 aa16.87■□□□□ 0.29
LIMK2-204ENST00000406516 CCDC96Q2M329 555 aa16.87■□□□□ 0.29
LIMK2-204ENST00000406516 SUPT20HL1Q3ZLR7 823 aa16.87■□□□□ 0.29
LIMK2-204ENST00000406516 CENPPQ6IPU0 288 aa16.87■□□□□ 0.29
LIMK2-204ENST00000406516 MOB2Q70IA6 237 aa16.87■□□□□ 0.29
LIMK2-204ENST00000406516 SMCR8Q8TEV9 937 aaPredicted RBP16.87■□□□□ 0.29
LIMK2-204ENST00000406516 DNAJC18Q9H819 358 aa16.87■□□□□ 0.29
LIMK2-204ENST00000406516 JADE2Q9NQC1 790 aa16.87■□□□□ 0.29
LIMK2-204ENST00000406516 ZMYND10O75800 440 aa16.87■□□□□ 0.29
LIMK2-204ENST00000406516 ADCY7P51828 1080 aa16.87■□□□□ 0.29
LIMK2-204ENST00000406516 SPA17Q15506 151 aa16.87■□□□□ 0.29
LIMK2-204ENST00000406516 TMEM266Q2M3C6 531 aa16.87■□□□□ 0.29
LIMK2-204ENST00000406516 VWA3BQ502W6 1294 aa16.87■□□□□ 0.29
LIMK2-204ENST00000406516 SECISBP2LQ93073 1101 aaKnown RBP16.87■□□□□ 0.29
LIMK2-204ENST00000406516 RIOX1Q9H6W3 641 aa16.87■□□□□ 0.29
LIMK2-204ENST00000406516 GPCPD1Q9NPB8 672 aa16.87■□□□□ 0.29
LIMK2-204ENST00000406516 A0A1W2PQJ5 194 aa16.86■□□□□ 0.29
LIMK2-204ENST00000406516 ESYT2A0FGR8 921 aa16.86■□□□□ 0.29
LIMK2-204ENST00000406516 CELF2O95319 508 aaKnown RBP16.86■□□□□ 0.29
LIMK2-204ENST00000406516 HLA-DOAP06340 250 aa16.86■□□□□ 0.29
LIMK2-204ENST00000406516 TNNT3P45378 269 aaPredicted RBP16.86■□□□□ 0.29
LIMK2-204ENST00000406516 VAV2P52735 878 aa16.86■□□□□ 0.29
LIMK2-204ENST00000406516 CKAP4Q07065 602 aaKnown RBP16.86■□□□□ 0.29
LIMK2-204ENST00000406516 HSP90B2PQ58FF3 399 aa16.86■□□□□ 0.29
LIMK2-204ENST00000406516 FIGNQ5HY92 759 aa16.86■□□□□ 0.29
LIMK2-204ENST00000406516 UNC13DQ70J99 1090 aa16.86■□□□□ 0.29
LIMK2-204ENST00000406516 TRERF1Q96PN7 1200 aa16.86■□□□□ 0.29
LIMK2-204ENST00000406516 NUDT12Q9BQG2 462 aa16.86■□□□□ 0.29
LIMK2-204ENST00000406516 NDST4Q9H3R1 872 aa16.86■□□□□ 0.29
LIMK2-204ENST00000406516 MMRN2Q9H8L6 949 aa16.86■□□□□ 0.29
LIMK2-204ENST00000406516 PASKQ96RG2 1323 aa16.86■□□□□ 0.29
LIMK2-204ENST00000406516 FOCADQ5VW36 1801 aa16.86■□□□□ 0.29
LIMK2-204ENST00000406516 SMARCA1P28370 1054 aa16.86■□□□□ 0.29
LIMK2-204ENST00000406516 SNX29Q8TEQ0 813 aa16.86■□□□□ 0.29
LIMK2-204ENST00000406516 DRC1Q96MC2 740 aa16.86■□□□□ 0.29
LIMK2-204ENST00000406516 STK17AQ9UEE5 414 aa16.86■□□□□ 0.29
LIMK2-204ENST00000406516 SERPINB13Q9UIV8 391 aa16.86■□□□□ 0.29
LIMK2-204ENST00000406516 PDE2AO00408 941 aaPredicted RBP16.85■□□□□ 0.29
LIMK2-204ENST00000406516 ATP2B2Q01814 1243 aa16.85■□□□□ 0.29
LIMK2-204ENST00000406516 GABPAQ06546 454 aa16.85■□□□□ 0.29
LIMK2-204ENST00000406516 LRRC41Q15345 812 aa16.85■□□□□ 0.29
LIMK2-204ENST00000406516 COBLL1Q53SF7 1204 aa16.85■□□□□ 0.29
LIMK2-204ENST00000406516 MSL3Q8N5Y2 521 aaKnown RBP16.85■□□□□ 0.29
LIMK2-204ENST00000406516 GLIS3Q8NEA6 775 aa16.85■□□□□ 0.29
LIMK2-204ENST00000406516 GDAP1L1Q96MZ0 367 aa16.85■□□□□ 0.29
LIMK2-204ENST00000406516 ARHGAP20Q9P2F6 1191 aa16.85■□□□□ 0.29
LIMK2-204ENST00000406516 COL2A1P02458 1487 aaPredicted RBP16.85■□□□□ 0.29
LIMK2-204ENST00000406516 EDIL3O43854 480 aa16.85■□□□□ 0.29
LIMK2-204ENST00000406516 USP2O75604 605 aaPredicted RBP16.85■□□□□ 0.29
LIMK2-204ENST00000406516 FXR2P51116 673 aaKnown RBP eCLIP16.85■□□□□ 0.29
LIMK2-204ENST00000406516 CDK17Q00537 523 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms