RNA–Protein interactions for RNA: ENST00000403946.7

OTOF-205, Transcript of otoferlin, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene OTOF, Length 6,937 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-205ENST00000403946 IWS1Q96ST2 819 aa11.9□□□□□ -0.5
OTOF-205ENST00000403946 ASIC3Q9UHC3 531 aa11.9□□□□□ -0.5
OTOF-205ENST00000403946 MAGI3Q5TCQ9 1506 aa11.9□□□□□ -0.5
OTOF-205ENST00000403946 FOSP01100 380 aaPredicted RBP11.9□□□□□ -0.51
OTOF-205ENST00000403946 ZFXP17010 805 aaPredicted RBP11.9□□□□□ -0.51
OTOF-205ENST00000403946 YIPF3Q9GZM5 350 aa11.9□□□□□ -0.51
OTOF-205ENST00000403946 BLZF1Q9H2G9 400 aa11.9□□□□□ -0.51
OTOF-205ENST00000403946 GRAMD4Q6IC98 578 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 SEPT8Q92599 483 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 MYO1AQ9UBC5 1043 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 AFG3L2Q9Y4W6 797 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 ZNF18P17022 549 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 IRX1P78414 480 aaPredicted RBP11.89□□□□□ -0.51
OTOF-205ENST00000403946 SEPT2Q15019 361 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 ANKRD20A4Q4UJ75 823 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 ANKRD20A8PQ5CZ79 823 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 ANKRD20A2Q5SQ80 823 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 ANKRD20A1Q5TYW2 823 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 PRR5LQ6MZQ0 368 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 MXD3Q9BW11 206 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 ATP11BQ9Y2G3 1177 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 IQSEC2Q5JU85 1478 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 RARBP10826 455 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 IGFBP4P22692 258 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 PPP1R2P41236 205 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 COL23A1Q86Y22 540 aaPredicted RBP11.89□□□□□ -0.51
OTOF-205ENST00000403946 PRPF31Q8WWY3 499 aaKnown RBP11.89□□□□□ -0.51
OTOF-205ENST00000403946 USP26Q9BXU7 913 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 POLR2DO15514 142 aaKnown RBP11.89□□□□□ -0.51
OTOF-205ENST00000403946 LGSNQ5TDP6 509 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 NEK8Q86SG6 692 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 TADA2BQ86TJ2 420 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 TEX2Q8IWB9 1127 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 CCDC13Q8IYE1 715 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 PSMB7Q99436 277 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 HAUS8Q9BT25 410 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 PALMDQ9NP74 551 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.89□□□□□ -0.51
OTOF-205ENST00000403946 SETD1BQ9UPS6 1966 aaKnown RBP11.89□□□□□ -0.51
OTOF-205ENST00000403946 USP17L15C9J2P7 530 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 USP17L13C9JLJ4 530 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 USP17L11C9JVI0 530 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 USP17L18D6R9N7 530 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 USP17L22D6RA61 530 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 USP17L17D6RBQ6 530 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 USP17L19D6RCP7 530 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 USP17L20D6RJB6 530 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 USP17L24Q0WX57 530 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 ST13P4Q8IZP2 240 aaPredicted RBP11.89□□□□□ -0.51
OTOF-205ENST00000403946 SYCE1Q8N0S2 351 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 PDZD8Q8NEN9 1154 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 CCHCR1Q8TD31 782 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 RABGGTAQ92696 567 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 EAF2Q96CJ1 260 aaPredicted RBP11.89□□□□□ -0.51
OTOF-205ENST00000403946 KMT5AQ9NQR1 393 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 RNF146Q9NTX7 359 aa11.89□□□□□ -0.51
OTOF-205ENST00000403946 PLCB4Q15147 1175 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 TERF2Q15554 542 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 SLC9C1Q4G0N8 1177 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 LRRC8AQ8IWT6 810 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 FBXO18Q8NFZ0 1043 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 GBA2Q9HCG7 927 aaPredicted RBP11.88□□□□□ -0.51
OTOF-205ENST00000403946 ZBTB40Q9NUA8 1239 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 TRIM17Q9Y577 477 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 GCC2Q8IWJ2 1684 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 KRT81Q14533 505 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 CASC4Q6P4E1 433 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 TTLL11Q8NHH1 800 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 SPATA33Q96N06 139 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 CCDC68Q9H2F9 335 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 DYNC1LI2O43237 492 aaPredicted RBP11.88□□□□□ -0.51
OTOF-205ENST00000403946 GADD45BO75293 160 aaPredicted RBP11.88□□□□□ -0.51
OTOF-205ENST00000403946 DDNO94850 711 aaPredicted RBP11.88□□□□□ -0.51
OTOF-205ENST00000403946 TFAMQ00059 246 aaKnown RBP11.88□□□□□ -0.51
OTOF-205ENST00000403946 UBE2SQ16763 222 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 TRPA1O75762 1119 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 SLMAPQ14BN4 828 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 RNF219Q5W0B1 726 aaPredicted RBP11.88□□□□□ -0.51
OTOF-205ENST00000403946 KRT40Q6A162 431 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 RMDN3Q96TC7 470 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 USP44Q9H0E7 712 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 RPS6KA1Q15418 735 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 CSGALNACT2Q8N6G5 542 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 NOP53Q9NZM5 478 aaKnown RBP11.88□□□□□ -0.51
OTOF-205ENST00000403946 CIAO1O76071 339 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 PRDX5P30044 214 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 NME8Q8N427 588 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 P3H4Q92791 437 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 NUDT12Q9BQG2 462 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 DRC3Q9H069 523 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 MYOZ2Q9NPC6 264 aa11.88□□□□□ -0.51
OTOF-205ENST00000403946 ARHGEF37A1IGU5 675 aa11.87□□□□□ -0.51
OTOF-205ENST00000403946 CHUKO15111 745 aa11.87□□□□□ -0.51
OTOF-205ENST00000403946 BARGINQ6ZT62 677 aa11.87□□□□□ -0.51
OTOF-205ENST00000403946 FANCBQ8NB91 859 aa11.87□□□□□ -0.51
OTOF-205ENST00000403946 TMEM63CQ9P1W3 806 aa11.87□□□□□ -0.51
OTOF-205ENST00000403946 PPP2R2CQ9Y2T4 447 aa11.87□□□□□ -0.51
OTOF-205ENST00000403946 SCG2P13521 617 aa11.87□□□□□ -0.51
OTOF-205ENST00000403946 AATKQ6ZMQ8 1374 aa11.87□□□□□ -0.51
OTOF-205ENST00000403946 ATP8B3O60423 1300 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms