RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 FGFBP2Q9BYJ0 223 aa15.57■□□□□ 0.08
ATG3-202ENST00000402314 MYO1AQ9UBC5 1043 aa15.57■□□□□ 0.08
ATG3-202ENST00000402314 FAM153AQ9UHL3 310 aa15.57■□□□□ 0.08
ATG3-202ENST00000402314 AFF2P51816 1311 aa15.57■□□□□ 0.08
ATG3-202ENST00000402314 TRIM14Q14142 442 aa15.57■□□□□ 0.08
ATG3-202ENST00000402314 FAM163AQ96GL9 167 aaPredicted RBP15.57■□□□□ 0.08
ATG3-202ENST00000402314 RNPC3Q96LT9 517 aaKnown RBP15.57■□□□□ 0.08
ATG3-202ENST00000402314 CCDC43Q96MW1 224 aaKnown RBP15.57■□□□□ 0.08
ATG3-202ENST00000402314 DBNDD1Q9H9R9 158 aa15.57■□□□□ 0.08
ATG3-202ENST00000402314 SHOX2O60902 331 aaPredicted RBP15.57■□□□□ 0.08
ATG3-202ENST00000402314 TUBBP07437 444 aa15.57■□□□□ 0.08
ATG3-202ENST00000402314 SHMT1P34896 483 aa15.57■□□□□ 0.08
ATG3-202ENST00000402314 MSL3Q8N5Y2 521 aaKnown RBP15.57■□□□□ 0.08
ATG3-202ENST00000402314 LARP4BQ92615 738 aaKnown RBP15.57■□□□□ 0.08
ATG3-202ENST00000402314 ZIM3Q96PE6 472 aa15.57■□□□□ 0.08
ATG3-202ENST00000402314 CEP89Q96ST8 783 aa15.57■□□□□ 0.08
ATG3-202ENST00000402314 ZC3H12CQ9C0D7 883 aaKnown RBP15.57■□□□□ 0.08
ATG3-202ENST00000402314 TTYH3Q9C0H2 523 aa15.57■□□□□ 0.08
ATG3-202ENST00000402314 SERPINB13Q9UIV8 391 aa15.57■□□□□ 0.08
ATG3-202ENST00000402314 NFU1Q9UMS0 254 aa15.57■□□□□ 0.08
ATG3-202ENST00000402314 MARCH6O60337 910 aa15.56■□□□□ 0.08
ATG3-202ENST00000402314 PSEN1P49768 467 aa15.56■□□□□ 0.08
ATG3-202ENST00000402314 CKAP4Q07065 602 aaKnown RBP15.56■□□□□ 0.08
ATG3-202ENST00000402314 E2F5Q15329 346 aa15.56■□□□□ 0.08
ATG3-202ENST00000402314 ZNF831Q5JPB2 1677 aa15.56■□□□□ 0.08
ATG3-202ENST00000402314 NPHP3-ACAD11A0A0J9YXS1 232 aa15.56■□□□□ 0.08
ATG3-202ENST00000402314 ZNF263O14978 683 aa15.56■□□□□ 0.08
ATG3-202ENST00000402314 TUBB4BP68371 445 aa15.56■□□□□ 0.08
ATG3-202ENST00000402314 SETQ01105 290 aaPredicted RBP15.56■□□□□ 0.08
ATG3-202ENST00000402314 KIF5AQ12840 1032 aa15.56■□□□□ 0.08
ATG3-202ENST00000402314 PAPD7Q5XG87 772 aaKnown RBP15.56■□□□□ 0.08
ATG3-202ENST00000402314 CCDC70Q6NSX1 233 aa15.56■□□□□ 0.08
ATG3-202ENST00000402314 CDC42EP5Q6NZY7 148 aa15.56■□□□□ 0.08
ATG3-202ENST00000402314 KIAA0825Q8IV33 1275 aa15.56■□□□□ 0.08
ATG3-202ENST00000402314 AENQ8WTP8 325 aaKnown RBP15.56■□□□□ 0.08
ATG3-202ENST00000402314 TBC1D22AQ8WUA7 517 aa15.56■□□□□ 0.08
ATG3-202ENST00000402314 DDX12PQ92771 950 aa15.56■□□□□ 0.08
ATG3-202ENST00000402314 MMRN2Q9H8L6 949 aa15.56■□□□□ 0.08
ATG3-202ENST00000402314 CDK5RAP2Q96SN8 1893 aa15.55■□□□□ 0.08
ATG3-202ENST00000402314 A0A1W2PQC6 194 aa15.55■□□□□ 0.08
ATG3-202ENST00000402314 HSF2BPO75031 334 aa15.55■□□□□ 0.08
ATG3-202ENST00000402314 MCM3P25205 808 aa15.55■□□□□ 0.08
ATG3-202ENST00000402314 ZNF543Q08ER8 600 aa15.55■□□□□ 0.08
ATG3-202ENST00000402314 SPATA4Q8NEY3 305 aa15.55■□□□□ 0.08
ATG3-202ENST00000402314 CCDC47Q96A33 483 aaKnown RBP15.55■□□□□ 0.08
ATG3-202ENST00000402314 BCCIPQ9P287 314 aaKnown RBP eCLIP15.55■□□□□ 0.08
ATG3-202ENST00000402314 CCDC172P0C7W6 258 aa15.55■□□□□ 0.08
ATG3-202ENST00000402314 STAT3P40763 770 aa15.55■□□□□ 0.08
ATG3-202ENST00000402314 CARSP49589 748 aaKnown RBP15.55■□□□□ 0.08
ATG3-202ENST00000402314 HDLBPQ00341 1268 aaKnown RBP15.55■□□□□ 0.08
ATG3-202ENST00000402314 MSL1Q68DK7 614 aa15.55■□□□□ 0.08
ATG3-202ENST00000402314 CREG2Q8IUH2 290 aa15.55■□□□□ 0.08
ATG3-202ENST00000402314 HAS1Q92839 578 aa15.55■□□□□ 0.08
ATG3-202ENST00000402314 ZNHIT6Q9NWK9 470 aaKnown RBP15.55■□□□□ 0.08
ATG3-202ENST00000402314 TAF1LQ8IZX4 1826 aa15.55■□□□□ 0.08
ATG3-202ENST00000402314 MYH1P12882 1939 aa15.55■□□□□ 0.08
ATG3-202ENST00000402314 TTLL1O95922 423 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 SLF2Q8IX21 1173 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 PROM2Q8N271 834 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 GIMAP7Q8NHV1 300 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 CABS1Q96KC9 395 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 CCDC42Q96M95 316 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 PACSIN2Q9UNF0 486 aaPredicted RBP15.54■□□□□ 0.08
ATG3-202ENST00000402314 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.54■□□□□ 0.08
ATG3-202ENST00000402314 E9PMD0 336 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 MYL1P05976 194 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 HOXA10P31260 410 aaPredicted RBP15.54■□□□□ 0.08
ATG3-202ENST00000402314 AMPD3Q01432 767 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 SWT1Q5T5J6 900 aaKnown RBP15.54■□□□□ 0.08
ATG3-202ENST00000402314 CNNM4Q6P4Q7 775 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 C2CD5Q86YS7 1000 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 NELFCDQ8IXH7 590 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 SCLT1Q96NL6 688 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 CUEDC2Q9H467 287 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 DNAJC18Q9H819 358 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 RBM12Q9NTZ6 932 aaKnown RBP15.54■□□□□ 0.08
ATG3-202ENST00000402314 BICDL2A1A5D9 508 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 E7EVH7 732 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 G3V3G9 751 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 KRT83P78385 493 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 DCAF8Q5TAQ9 597 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 SLC30A10Q6XR72 485 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 MAATS1Q7Z4T9 603 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 OR2W6PQ8NHA6 318 aa15.54■□□□□ 0.08
ATG3-202ENST00000402314 DDX25Q9UHL0 483 aaKnown RBP15.54■□□□□ 0.08
ATG3-202ENST00000402314 RDXP35241 583 aaKnown RBP15.53■□□□□ 0.08
ATG3-202ENST00000402314 NOVP48745 357 aa15.53■□□□□ 0.08
ATG3-202ENST00000402314 GUCY2DQ02846 1103 aa15.53■□□□□ 0.08
ATG3-202ENST00000402314 SF3B2Q13435 895 aaKnown RBP15.53■□□□□ 0.08
ATG3-202ENST00000402314 ASPRV1Q53RT3 343 aa15.53■□□□□ 0.08
ATG3-202ENST00000402314 KRT79Q5XKE5 535 aa15.53■□□□□ 0.08
ATG3-202ENST00000402314 CENPPQ6IPU0 288 aa15.53■□□□□ 0.08
ATG3-202ENST00000402314 APOBEC3HQ6NTF7 200 aaKnown RBP15.53■□□□□ 0.08
ATG3-202ENST00000402314 TANGO6Q9C0B7 1094 aa15.53■□□□□ 0.08
ATG3-202ENST00000402314 ZHX3Q9H4I2 956 aa15.53■□□□□ 0.08
ATG3-202ENST00000402314 IGKV6D-41A0A0C4DH26 115 aa15.53■□□□□ 0.08
ATG3-202ENST00000402314 ADRA2BP18089 450 aa15.53■□□□□ 0.08
ATG3-202ENST00000402314 CYLC1P35663 651 aaPredicted RBP15.53■□□□□ 0.08
ATG3-202ENST00000402314 RBM5P52756 815 aaKnown RBP eCLIP15.53■□□□□ 0.08
ATG3-202ENST00000402314 TMEM266Q2M3C6 531 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms