RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 COL15A1P39059 1388 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 DISP2A7MBM2 1401 aa6.97□□□□□ -1.29
TRAPPC13-202ENST00000399438 SHANK3Q9BYB0 1731 aa6.96□□□□□ -1.29
TRAPPC13-202ENST00000399438 MPHOSPH10O00566 681 aaKnown RBP6.96□□□□□ -1.29
TRAPPC13-202ENST00000399438 RASA4O43374 803 aa6.96□□□□□ -1.29
TRAPPC13-202ENST00000399438 NRLP54845 237 aa6.96□□□□□ -1.29
TRAPPC13-202ENST00000399438 CUL4AQ13619 759 aa6.96□□□□□ -1.29
TRAPPC13-202ENST00000399438 OXLD1Q5BKU9 147 aa6.96□□□□□ -1.29
TRAPPC13-202ENST00000399438 TYW1BQ6NUM6 668 aa6.96□□□□□ -1.29
TRAPPC13-202ENST00000399438 ELOA2Q8IYF1 753 aaPredicted RBP6.96□□□□□ -1.29
TRAPPC13-202ENST00000399438 TTC17Q96AE7 1141 aa6.96□□□□□ -1.29
TRAPPC13-202ENST00000399438 RBM18Q96H35 190 aaKnown RBP6.96□□□□□ -1.29
TRAPPC13-202ENST00000399438 TRIM56Q9BRZ2 755 aaKnown RBP6.96□□□□□ -1.29
TRAPPC13-202ENST00000399438 TMEM134Q9H6X4 195 aa6.96□□□□□ -1.29
TRAPPC13-202ENST00000399438 ZFYVE28Q9HCC9 887 aa6.96□□□□□ -1.29
TRAPPC13-202ENST00000399438 KCNQ5Q9NR82 932 aa6.96□□□□□ -1.29
TRAPPC13-202ENST00000399438 TOPORSQ9NS56 1045 aaPredicted RBP6.96□□□□□ -1.29
TRAPPC13-202ENST00000399438 CGNQ9P2M7 1197 aaKnown RBP6.96□□□□□ -1.29
TRAPPC13-202ENST00000399438 M0R2N6 131 aa6.96□□□□□ -1.3
TRAPPC13-202ENST00000399438 TMEM127O75204 238 aa6.96□□□□□ -1.3
TRAPPC13-202ENST00000399438 CPP00450 1065 aa6.96□□□□□ -1.3
TRAPPC13-202ENST00000399438 ASGR2P07307 311 aa6.96□□□□□ -1.3
TRAPPC13-202ENST00000399438 SNRPA1P09661 255 aaKnown RBP6.96□□□□□ -1.3
TRAPPC13-202ENST00000399438 ZSCAN22P10073 491 aaPredicted RBP6.96□□□□□ -1.3
TRAPPC13-202ENST00000399438 ZKSCAN1P17029 563 aaPredicted RBP6.96□□□□□ -1.3
TRAPPC13-202ENST00000399438 RXRAP19793 462 aa6.96□□□□□ -1.3
TRAPPC13-202ENST00000399438 IRS1P35568 1242 aa6.96□□□□□ -1.3
TRAPPC13-202ENST00000399438 IREB2P48200 963 aaKnown RBP6.96□□□□□ -1.3
TRAPPC13-202ENST00000399438 USP14P54578 494 aa6.96□□□□□ -1.3
TRAPPC13-202ENST00000399438 COX20Q5RI15 118 aa6.96□□□□□ -1.3
TRAPPC13-202ENST00000399438 MEX3CQ5U5Q3 659 aaKnown RBP6.96□□□□□ -1.3
TRAPPC13-202ENST00000399438 RNF20Q5VTR2 975 aa6.96□□□□□ -1.3
TRAPPC13-202ENST00000399438 BRF1Q92994 677 aa6.96□□□□□ -1.3
TRAPPC13-202ENST00000399438 NGLY1Q96IV0 654 aa6.96□□□□□ -1.3
TRAPPC13-202ENST00000399438 MOGAT1Q96PD6 335 aa6.96□□□□□ -1.3
TRAPPC13-202ENST00000399438 METTL22Q9BUU2 404 aaPredicted RBP6.96□□□□□ -1.3
TRAPPC13-202ENST00000399438 UBP1Q9NZI7 540 aa6.96□□□□□ -1.3
TRAPPC13-202ENST00000399438 DOLKQ9UPQ8 538 aa6.96□□□□□ -1.3
TRAPPC13-202ENST00000399438 ATP6V0A2Q9Y487 856 aa6.96□□□□□ -1.3
TRAPPC13-202ENST00000399438 OVOS2A0A0G2JMS6 1433 aa6.96□□□□□ -1.3
TRAPPC13-202ENST00000399438 ATRNO75882 1429 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 SPATA31A1Q5TZJ5 1347 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 SPATA31A5Q5VU36 1347 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 SPATA31A7Q8IWB4 1347 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 DNAJC25-GNG10A0A024R161 153 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 MINDY4BA8MYZ0 360 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 MSNP26038 577 aaKnown RBP6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 GRK6P43250 576 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 LRRTM3Q86VH5 581 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 RTKN2Q8IZC4 609 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 CLIP3Q96DZ5 547 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 SGCZQ96LD1 299 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 NUDT16L1Q9BRJ7 211 aaKnown RBP6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 PUS7LQ9H0K6 701 aaKnown RBP6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 LMAN2LQ9H0V9 348 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 KCTD5Q9NXV2 234 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 FPGT-TNNI3KV9GXZ4 949 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 LOC102724428A0A0B4J2F2 783 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 TTLL13PA6NNM8 815 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 F13A1P00488 732 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 SEPHS1P49903 392 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 SIK1P57059 783 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 MAP3K10Q02779 954 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 ADCY1Q08828 1119 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 ISM2Q6H9L7 571 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 BLOC1S2Q6QNY1 142 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 FAM196AQ6ZSG2 479 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 SPATA5Q8NB90 893 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 CCT6BQ92526 530 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 FAM8A1Q9UBU6 413 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 MTMR6Q9Y217 621 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 CRYL1Q9Y2S2 319 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 TCHHQ07283 1943 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 ADAMTS7Q9UKP4 1686 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 AFF2P51816 1311 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 WDR33Q9C0J8 1336 aaKnown RBP6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 MASP2O00187 686 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 CRKP46108 304 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 TM4SF4P48230 202 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 SCARF1Q14162 830 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 LRSAM1Q6UWE0 723 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 STOX1Q6ZVD7 989 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 DNAJC10Q8IXB1 793 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 CCDC144CPQ8IYA2 1237 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 ADAMTS18Q8TE60 1221 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 RPAP3Q9H6T3 665 aaPredicted RBP6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 INCENPQ9NQS7 918 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 SPEF1Q9Y4P9 236 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 LRRC37A3O60309 1634 aa6.95□□□□□ -1.3
TRAPPC13-202ENST00000399438 GLI3P10071 1580 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 THSD7AQ9UPZ6 1657 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 ADCY3O60266 1144 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 FBXO21O94952 628 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 PF4V1P10720 104 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 SLC9A5Q14940 896 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 C6orf132Q5T0Z8 1188 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 ABRAXAS1Q6UWZ7 409 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 Q6ZUG5 572 aa6.94□□□□□ -1.3
TRAPPC13-202ENST00000399438 ACSBG1Q96GR2 724 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms