RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 ZNF569Q5MCW4 686 aa19.64■□□□□ 0.73
HLA-DQB1-204ENST00000399084 WDR59Q6PJI9 974 aa19.64■□□□□ 0.73
HLA-DQB1-204ENST00000399084 CATSPER3Q86XQ3 398 aa19.64■□□□□ 0.73
HLA-DQB1-204ENST00000399084 PCMTD1Q96MG8 357 aaPredicted RBP19.64■□□□□ 0.73
HLA-DQB1-204ENST00000399084 TSGA10Q9BZW7 698 aa19.64■□□□□ 0.73
HLA-DQB1-204ENST00000399084 TUFT1Q9NNX1 390 aa19.64■□□□□ 0.73
HLA-DQB1-204ENST00000399084 SIK3Q9Y2K2 1263 aa19.64■□□□□ 0.73
HLA-DQB1-204ENST00000399084 E9PMD0 336 aa19.63■□□□□ 0.73
HLA-DQB1-204ENST00000399084 OPLAHO14841 1288 aa19.63■□□□□ 0.73
HLA-DQB1-204ENST00000399084 RAD17O75943 681 aa19.63■□□□□ 0.73
HLA-DQB1-204ENST00000399084 ARHGAP25P42331 645 aa19.63■□□□□ 0.73
HLA-DQB1-204ENST00000399084 WHAMMP3Q1A5X7 153 aa19.63■□□□□ 0.73
HLA-DQB1-204ENST00000399084 HERC4Q5GLZ8 1057 aaPredicted RBP19.63■□□□□ 0.73
HLA-DQB1-204ENST00000399084 SYN2Q92777 582 aaPredicted RBP19.63■□□□□ 0.73
HLA-DQB1-204ENST00000399084 CHP1Q99653 195 aa19.63■□□□□ 0.73
HLA-DQB1-204ENST00000399084 NAPGQ99747 312 aaPredicted RBP19.63■□□□□ 0.73
HLA-DQB1-204ENST00000399084 EMILIN3Q9NT22 766 aa19.63■□□□□ 0.73
HLA-DQB1-204ENST00000399084 DDX41Q9UJV9 622 aaKnown RBP19.63■□□□□ 0.73
HLA-DQB1-204ENST00000399084 POTEB3A0JP26 581 aa19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 POTECB2RU33 542 aa19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 FAM86B1E9PN63 330 aa19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 MED24O75448 989 aa19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 KRT18P05783 430 aaKnown RBP19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 FAM86B2P0C5J1 330 aa19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 POTEBQ6S5H4 581 aa19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 RSRC2Q7L4I2 434 aaKnown RBP19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 GOLGA1Q92805 767 aa19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 SLF1Q9BQI6 1058 aa19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 MAP3K20Q9NYL2 800 aaKnown RBP19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 RASSF10A6NK89 507 aa19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 TRAF5O00463 557 aa19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 MSH4O15457 936 aa19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 EYA4O95677 639 aa19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 SSBP05455 408 aaKnown RBP eCLIP19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 SPATA31C1P0DKV0 1188 aa19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 GAP43P17677 238 aa19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 SRGAP1Q7Z6B7 1085 aa19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 ACRBPQ8NEB7 543 aa19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 HPS3Q969F9 1004 aa19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 KCND2Q9NZV8 630 aa19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 VAV3Q9UKW4 847 aa19.62■□□□□ 0.73
HLA-DQB1-204ENST00000399084 CLRN2A0PK11 232 aa19.61■□□□□ 0.73
HLA-DQB1-204ENST00000399084 DPEP1P16444 411 aa19.61■□□□□ 0.73
HLA-DQB1-204ENST00000399084 RPS12P25398 132 aaKnown RBP19.61■□□□□ 0.73
HLA-DQB1-204ENST00000399084 SETQ01105 290 aaPredicted RBP19.61■□□□□ 0.73
HLA-DQB1-204ENST00000399084 PPP2R5CQ13362 524 aa19.61■□□□□ 0.73
HLA-DQB1-204ENST00000399084 TNFAIP1Q13829 316 aa19.61■□□□□ 0.73
HLA-DQB1-204ENST00000399084 TNIP1Q15025 636 aa19.61■□□□□ 0.73
HLA-DQB1-204ENST00000399084 KRT26Q7Z3Y9 468 aa19.61■□□□□ 0.73
HLA-DQB1-204ENST00000399084 LPAR1Q92633 364 aa19.61■□□□□ 0.73
HLA-DQB1-204ENST00000399084 P2RX7Q99572 595 aaKnown RBP19.61■□□□□ 0.73
HLA-DQB1-204ENST00000399084 WDR11Q9BZH6 1224 aa19.61■□□□□ 0.73
HLA-DQB1-204ENST00000399084 NHEJ1Q9H9Q4 299 aaPredicted RBP19.61■□□□□ 0.73
HLA-DQB1-204ENST00000399084 ZNF277Q9NRM2 450 aaPredicted RBP19.61■□□□□ 0.73
HLA-DQB1-204ENST00000399084 AGPAT5Q9NUQ2 364 aa19.61■□□□□ 0.73
HLA-DQB1-204ENST00000399084 PIM2Q9P1W9 311 aa19.61■□□□□ 0.73
HLA-DQB1-204ENST00000399084 TRAF3IP3Q9Y228 551 aa19.61■□□□□ 0.73
HLA-DQB1-204ENST00000399084 KIF13BQ9NQT8 1826 aa19.61■□□□□ 0.73
HLA-DQB1-204ENST00000399084 IGLV3-22A0A075B6J6 115 aa19.6■□□□□ 0.73
HLA-DQB1-204ENST00000399084 CETN3O15182 167 aa19.6■□□□□ 0.73
HLA-DQB1-204ENST00000399084 BMS1Q14692 1282 aaKnown RBP19.6■□□□□ 0.73
HLA-DQB1-204ENST00000399084 SPA17Q15506 151 aa19.6■□□□□ 0.73
HLA-DQB1-204ENST00000399084 FAM83BQ5T0W9 1011 aa19.6■□□□□ 0.73
HLA-DQB1-204ENST00000399084 NCAPH2Q6IBW4 605 aa19.6■□□□□ 0.73
HLA-DQB1-204ENST00000399084 FBXO38Q6PIJ6 1188 aa19.6■□□□□ 0.73
HLA-DQB1-204ENST00000399084 CCDC42Q96M95 316 aa19.6■□□□□ 0.73
HLA-DQB1-204ENST00000399084 KCTD10Q9H3F6 313 aa19.6■□□□□ 0.73
HLA-DQB1-204ENST00000399084 PDXKO00764 312 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 LCA5LO95447 670 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 ECE1P42892 770 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 GIT2Q14161 759 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 BMT2Q1RMZ1 405 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 CCDC40Q4G0X9 1142 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 ARSHQ5FYA8 562 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 NEK11Q8NG66 645 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 ACER1Q8TDN7 264 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 SLC5A5Q92911 643 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 PGAP2Q9UHJ9 254 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 SSU72P8A0A1W2PR75 194 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 ANO9A1A5B4 782 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 USO1O60763 962 aaKnown RBP19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 FDX1P10109 184 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 RPL13P26373 211 aaKnown RBP19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 GHRHRQ02643 423 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 CIAPIN1Q6FI81 312 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 KIAA1328Q86T90 577 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 TRIM59Q8IWR1 403 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 SPICE1Q8N0Z3 855 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 SLC35F6Q8N357 371 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 NEK9Q8TD19 979 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 SCFD1Q8WVM8 642 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 HSD17B14Q9BPX1 270 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 VEZTQ9HBM0 779 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 OLFML3Q9NRN5 406 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 SEL1LQ9UBV2 794 aa19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 REXO2Q9Y3B8 237 aaKnown RBP19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 V9GYY5 206 aaPredicted RBP19.59■□□□□ 0.73
HLA-DQB1-204ENST00000399084 CALUO43852 315 aaPredicted RBP19.58■□□□□ 0.72
HLA-DQB1-204ENST00000399084 PSMD10O75832 226 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms