RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 FRMD3A2A2Y4 597 aa28.62■■■□□ 2.17
SHARPIN-202ENST00000398712 USP14P54578 494 aa28.62■■■□□ 2.17
SHARPIN-202ENST00000398712 LRCH2Q5VUJ6 765 aa28.62■■■□□ 2.17
SHARPIN-202ENST00000398712 MCF2L2Q86YR7 1114 aa28.62■■■□□ 2.17
SHARPIN-202ENST00000398712 AGBL1Q96MI9 1066 aa28.62■■■□□ 2.17
SHARPIN-202ENST00000398712 EIF2AK1Q9BQI3 630 aaKnown RBP28.62■■■□□ 2.17
SHARPIN-202ENST00000398712 ZNF536O15090 1300 aa28.62■■■□□ 2.17
SHARPIN-202ENST00000398712 KRT9P35527 623 aa28.61■■■□□ 2.17
SHARPIN-202ENST00000398712 TBC1D8BQ0IIM8 1120 aa28.61■■■□□ 2.17
SHARPIN-202ENST00000398712 PPP2R5CQ13362 524 aa28.61■■■□□ 2.17
SHARPIN-202ENST00000398712 LRRC41Q15345 812 aa28.61■■■□□ 2.17
SHARPIN-202ENST00000398712 FKBP15Q5T1M5 1219 aa28.61■■■□□ 2.17
SHARPIN-202ENST00000398712 CYP26C1Q6V0L0 522 aa28.61■■■□□ 2.17
SHARPIN-202ENST00000398712 APOBEC3FQ8IUX4 373 aaKnown RBP28.61■■■□□ 2.17
SHARPIN-202ENST00000398712 RETREG2Q8NC44 543 aa28.61■■■□□ 2.17
SHARPIN-202ENST00000398712 PNMA2Q9UL42 364 aa28.61■■■□□ 2.17
SHARPIN-202ENST00000398712 PSMD10O75832 226 aa28.6■■■□□ 2.17
SHARPIN-202ENST00000398712 HERC4Q5GLZ8 1057 aaPredicted RBP28.6■■■□□ 2.17
SHARPIN-202ENST00000398712 NBPF12Q5TAG4 269 aaPredicted RBP28.6■■■□□ 2.17
SHARPIN-202ENST00000398712 TRIM65Q6PJ69 517 aa28.6■■■□□ 2.17
SHARPIN-202ENST00000398712 EEF2KMTQ96G04 330 aa28.6■■■□□ 2.17
SHARPIN-202ENST00000398712 TANGO6Q9C0B7 1094 aa28.6■■■□□ 2.17
SHARPIN-202ENST00000398712 TUFT1Q9NNX1 390 aa28.6■■■□□ 2.17
SHARPIN-202ENST00000398712 LUC7L2Q9Y383 392 aaKnown RBP28.6■■■□□ 2.17
SHARPIN-202ENST00000398712 PCDHA2Q9Y5H9 948 aa28.6■■■□□ 2.17
SHARPIN-202ENST00000398712 ZNF541Q9H0D2 1346 aa28.6■■■□□ 2.17
SHARPIN-202ENST00000398712 ARSHQ5FYA8 562 aa28.6■■■□□ 2.17
SHARPIN-202ENST00000398712 MIIPQ5JXC2 388 aa28.6■■■□□ 2.17
SHARPIN-202ENST00000398712 RAD9BQ6WBX8 426 aa28.6■■■□□ 2.17
SHARPIN-202ENST00000398712 OTOP1Q7RTM1 612 aa28.6■■■□□ 2.17
SHARPIN-202ENST00000398712 IQCDQ96DY2 449 aa28.6■■■□□ 2.17
SHARPIN-202ENST00000398712 CAPN11Q9UMQ6 739 aa28.6■■■□□ 2.17
SHARPIN-202ENST00000398712 NPHP3-ACAD11A0A0J9YXS1 232 aa28.59■■■□□ 2.17
SHARPIN-202ENST00000398712 MEIS1O00470 390 aa28.59■■■□□ 2.17
SHARPIN-202ENST00000398712 PABPC4Q13310 644 aaKnown RBP eCLIP28.59■■■□□ 2.172e-6■■■■□ 21.9
SHARPIN-202ENST00000398712 MTF1Q14872 753 aa28.59■■■□□ 2.17
SHARPIN-202ENST00000398712 KRT26Q7Z3Y9 468 aa28.59■■■□□ 2.17
SHARPIN-202ENST00000398712 ERGIC2Q96RQ1 377 aa28.59■■■□□ 2.17
SHARPIN-202ENST00000398712 WDR11Q9BZH6 1224 aa28.59■■■□□ 2.17
SHARPIN-202ENST00000398712 SLC38A10Q9HBR0 1119 aa28.59■■■□□ 2.17
SHARPIN-202ENST00000398712 TTC26A0AVF1 554 aa28.58■■■□□ 2.17
SHARPIN-202ENST00000398712 GAS7O60861 476 aa28.58■■■□□ 2.17
SHARPIN-202ENST00000398712 EYA4O95677 639 aa28.58■■■□□ 2.17
SHARPIN-202ENST00000398712 PSMC6P62333 389 aa28.58■■■□□ 2.17
SHARPIN-202ENST00000398712 UBXN2AP68543 259 aa28.58■■■□□ 2.17
SHARPIN-202ENST00000398712 GHRHRQ02643 423 aa28.58■■■□□ 2.17
SHARPIN-202ENST00000398712 MTMR2Q13614 643 aa28.58■■■□□ 2.17
SHARPIN-202ENST00000398712 TSR1Q2NL82 804 aaKnown RBP28.58■■■□□ 2.17
SHARPIN-202ENST00000398712 ZCWPW2Q504Y3 356 aa28.58■■■□□ 2.17
SHARPIN-202ENST00000398712 LRRC55Q6ZSA7 311 aa28.58■■■□□ 2.17
SHARPIN-202ENST00000398712 SAMD3Q8N6K7 520 aa28.58■■■□□ 2.17
SHARPIN-202ENST00000398712 GLIS3Q8NEA6 775 aa28.58■■■□□ 2.17
SHARPIN-202ENST00000398712 OR8K1Q8NGG5 319 aa28.58■■■□□ 2.17
SHARPIN-202ENST00000398712 DESI2Q9BSY9 194 aa28.58■■■□□ 2.17
SHARPIN-202ENST00000398712 AS3MTQ9HBK9 375 aa28.58■■■□□ 2.17
SHARPIN-202ENST00000398712 MAP3K20Q9NYL2 800 aaKnown RBP28.58■■■□□ 2.17
SHARPIN-202ENST00000398712 ADGRG1Q9Y653 693 aa28.58■■■□□ 2.17
SHARPIN-202ENST00000398712 RBBP6Q7Z6E9 1792 aaKnown RBP28.58■■■□□ 2.17
SHARPIN-202ENST00000398712 EML1O00423 815 aa28.57■■■□□ 2.16
SHARPIN-202ENST00000398712 MUTP22033 750 aa28.57■■■□□ 2.16
SHARPIN-202ENST00000398712 FKBP3Q00688 224 aaKnown RBP28.57■■■□□ 2.16
SHARPIN-202ENST00000398712 CYP4A11Q02928 519 aa28.57■■■□□ 2.16
SHARPIN-202ENST00000398712 SYCP1Q15431 976 aa28.57■■■□□ 2.16
SHARPIN-202ENST00000398712 MAN2A1Q16706 1144 aa28.57■■■□□ 2.16
SHARPIN-202ENST00000398712 SCYL3Q8IZE3 742 aa28.57■■■□□ 2.16
SHARPIN-202ENST00000398712 DNAI1Q9UI46 699 aa28.57■■■□□ 2.16
SHARPIN-202ENST00000398712 ZNF112Q9UJU3 913 aa28.57■■■□□ 2.16
SHARPIN-202ENST00000398712 PPP1R9AQ9ULJ8 1098 aa28.57■■■□□ 2.16
SHARPIN-202ENST00000398712 CTDP1Q9Y5B0 961 aaPredicted RBP28.57■■■□□ 2.16
SHARPIN-202ENST00000398712 RPTORQ8N122 1335 aa28.57■■■□□ 2.16
SHARPIN-202ENST00000398712 RNF225M0QZC1 329 aaPredicted RBP28.57■■■□□ 2.16
SHARPIN-202ENST00000398712 FLOT1O75955 427 aa28.57■■■□□ 2.16
SHARPIN-202ENST00000398712 FDX1P10109 184 aa28.57■■■□□ 2.16
SHARPIN-202ENST00000398712 VCAM1P19320 739 aa28.57■■■□□ 2.16
SHARPIN-202ENST00000398712 GIT2Q14161 759 aa28.57■■■□□ 2.16
SHARPIN-202ENST00000398712 VWA3BQ502W6 1294 aa28.57■■■□□ 2.16
SHARPIN-202ENST00000398712 CLEC4DQ8WXI8 215 aa28.57■■■□□ 2.16
SHARPIN-202ENST00000398712 DNAJC7Q99615 494 aa28.57■■■□□ 2.16
SHARPIN-202ENST00000398712 ZNF577Q9BSK1 485 aa28.57■■■□□ 2.16
SHARPIN-202ENST00000398712 TBC1D7Q9P0N9 293 aa28.57■■■□□ 2.16
SHARPIN-202ENST00000398712 CEP63Q96MT8 703 aa28.56■■■□□ 2.16
SHARPIN-202ENST00000398712 HSD17B14Q9BPX1 270 aa28.56■■■□□ 2.16
SHARPIN-202ENST00000398712 MXRA8Q9BRK3 442 aa28.56■■■□□ 2.16
SHARPIN-202ENST00000398712 EMILIN3Q9NT22 766 aa28.56■■■□□ 2.16
SHARPIN-202ENST00000398712 TRIM21P19474 475 aaKnown RBP28.55■■■□□ 2.16
SHARPIN-202ENST00000398712 CACNB1Q02641 598 aaPredicted RBP28.55■■■□□ 2.16
SHARPIN-202ENST00000398712 RAD51AP2Q09MP3 1159 aa28.55■■■□□ 2.16
SHARPIN-202ENST00000398712 FIGNQ5HY92 759 aa28.55■■■□□ 2.16
SHARPIN-202ENST00000398712 ANGEL2Q5VTE6 544 aaKnown RBP28.55■■■□□ 2.16
SHARPIN-202ENST00000398712 NLGN2Q8NFZ4 835 aa28.55■■■□□ 2.16
SHARPIN-202ENST00000398712 TEKT3Q9BXF9 490 aa28.55■■■□□ 2.16
SHARPIN-202ENST00000398712 ZHX3Q9H4I2 956 aa28.55■■■□□ 2.16
SHARPIN-202ENST00000398712 RPAP3Q9H6T3 665 aaPredicted RBP28.55■■■□□ 2.16
SHARPIN-202ENST00000398712 L2HGDHQ9H9P8 463 aa28.55■■■□□ 2.16
SHARPIN-202ENST00000398712 PICK1Q9NRD5 415 aa28.55■■■□□ 2.16
SHARPIN-202ENST00000398712 NFIBO00712 420 aa28.55■■■□□ 2.16
SHARPIN-202ENST00000398712 ZBED4O75132 1171 aa28.55■■■□□ 2.16
SHARPIN-202ENST00000398712 ALAS1P13196 640 aa28.55■■■□□ 2.16
SHARPIN-202ENST00000398712 ERVK-24P63145 666 aa28.55■■■□□ 2.16
SHARPIN-202ENST00000398712 PPP4R3CPQ6ZMV5 832 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms