RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 GALNT17Q6IS24 598 aa29.02■■■□□ 2.24
U2AF1-203ENST00000398137 SEPT14Q6ZU15 432 aa29.02■■■□□ 2.24
U2AF1-203ENST00000398137 VWCEQ96DN2 955 aa29.02■■■□□ 2.24
U2AF1-203ENST00000398137 FAM161BQ96MY7 647 aa29.02■■■□□ 2.24
U2AF1-203ENST00000398137 SEZ6LQ9BYH1 1024 aa29.02■■■□□ 2.24
U2AF1-203ENST00000398137 KIF3AQ9Y496 699 aa29.02■■■□□ 2.24
U2AF1-203ENST00000398137 NR3C2P08235 984 aa29.01■■■□□ 2.23
U2AF1-203ENST00000398137 ARHGAP1Q07960 439 aa29.01■■■□□ 2.23
U2AF1-203ENST00000398137 MTG1Q9BT17 334 aaPredicted RBP29.01■■■□□ 2.23
U2AF1-203ENST00000398137 NOC4LQ9BVI4 516 aaKnown RBP29.01■■■□□ 2.23
U2AF1-203ENST00000398137 STXBP5LQ9Y2K9 1186 aa29.01■■■□□ 2.23
U2AF1-203ENST00000398137 RGS20O76081 388 aa29■■■□□ 2.23
U2AF1-203ENST00000398137 FOSP01100 380 aaPredicted RBP29■■■□□ 2.23
U2AF1-203ENST00000398137 ACRP10323 421 aa29■■■□□ 2.23
U2AF1-203ENST00000398137 MYCLP12524 364 aaPredicted RBP29■■■□□ 2.23
U2AF1-203ENST00000398137 STXBP2Q15833 593 aa29■■■□□ 2.23
U2AF1-203ENST00000398137 RASIP1Q5U651 963 aa29■■■□□ 2.23
U2AF1-203ENST00000398137 INTS4Q96HW7 963 aaKnown RBP29■■■□□ 2.23
U2AF1-203ENST00000398137 WNT8AQ9H1J5 351 aa29■■■□□ 2.23
U2AF1-203ENST00000398137 TTYH1Q9H313 450 aaPredicted RBP29■■■□□ 2.23
U2AF1-203ENST00000398137 HIPK3Q9H422 1215 aa29■■■□□ 2.23
U2AF1-203ENST00000398137 EHMT1Q9H9B1 1298 aa29■■■□□ 2.23
U2AF1-203ENST00000398137 TRMT13Q9NUP7 481 aaKnown RBP29■■■□□ 2.23
U2AF1-203ENST00000398137 MMP1P03956 469 aa28.99■■■□□ 2.23
U2AF1-203ENST00000398137 CCND2P30279 289 aa28.99■■■□□ 2.23
U2AF1-203ENST00000398137 PPIGQ13427 754 aaKnown RBP eCLIP28.99■■■□□ 2.23
U2AF1-203ENST00000398137 OXER1Q8TDS5 423 aa28.99■■■□□ 2.23
U2AF1-203ENST00000398137 EYSQ5T1H1 3165 aa28.98■■■□□ 2.23
U2AF1-203ENST00000398137 KRT2P35908 639 aa28.98■■■□□ 2.23
U2AF1-203ENST00000398137 NBPF20Q3BBV1 942 aa28.98■■■□□ 2.23
U2AF1-203ENST00000398137 TMEM199Q8N511 208 aa28.98■■■□□ 2.23
U2AF1-203ENST00000398137 AFG1LQ8WV93 481 aa28.98■■■□□ 2.23
U2AF1-203ENST00000398137 ZFP91Q96JP5 570 aaPredicted RBP28.98■■■□□ 2.23
U2AF1-203ENST00000398137 BRMS1Q9HCU9 246 aa28.98■■■□□ 2.23
U2AF1-203ENST00000398137 DDX41Q9UJV9 622 aaKnown RBP28.98■■■□□ 2.23
U2AF1-203ENST00000398137 MYH7BA7E2Y1 1941 aa28.98■■■□□ 2.23
U2AF1-203ENST00000398137 M0R2N6 131 aa28.97■■■□□ 2.23
U2AF1-203ENST00000398137 EIF3JO75822 258 aaKnown RBP28.97■■■□□ 2.23
U2AF1-203ENST00000398137 HSP90AA1P07900 732 aaKnown RBP28.97■■■□□ 2.23
U2AF1-203ENST00000398137 ZNF697Q5TEC3 545 aa28.97■■■□□ 2.23
U2AF1-203ENST00000398137 MCTP2Q6DN12 878 aa28.97■■■□□ 2.23
U2AF1-203ENST00000398137 ZNF365Q70YC5 407 aa28.97■■■□□ 2.23
U2AF1-203ENST00000398137 VSIG10LQ86VR7 867 aa28.97■■■□□ 2.23
U2AF1-203ENST00000398137 SEMA6BQ9H3T3 888 aa28.97■■■□□ 2.23
U2AF1-203ENST00000398137 MMP3P08254 477 aa28.96■■■□□ 2.23
U2AF1-203ENST00000398137 CYP2C9P11712 490 aa28.96■■■□□ 2.23
U2AF1-203ENST00000398137 SREBF1P36956 1147 aa28.96■■■□□ 2.23
U2AF1-203ENST00000398137 CCL23P55773 120 aa28.96■■■□□ 2.23
U2AF1-203ENST00000398137 PCNX4Q63HM2 1172 aa28.96■■■□□ 2.23
U2AF1-203ENST00000398137 DIS3L2Q8IYB7 885 aaKnown RBP28.96■■■□□ 2.23
U2AF1-203ENST00000398137 FBXO18Q8NFZ0 1043 aa28.96■■■□□ 2.23
U2AF1-203ENST00000398137 IL23AQ9NPF7 189 aa28.96■■■□□ 2.23
U2AF1-203ENST00000398137 SCN5AQ14524 2016 aa28.95■■■□□ 2.23
U2AF1-203ENST00000398137 KPNA6O60684 536 aa28.95■■■□□ 2.22
U2AF1-203ENST00000398137 GH1P01241 217 aa28.95■■■□□ 2.22
U2AF1-203ENST00000398137 NR5A1Q13285 461 aa28.95■■■□□ 2.22
U2AF1-203ENST00000398137 KAT2BQ92831 832 aa28.95■■■□□ 2.22
U2AF1-203ENST00000398137 MRPS9P82933 396 aaKnown RBP28.94■■■□□ 2.22
U2AF1-203ENST00000398137 ARHGAP4P98171 946 aa28.94■■■□□ 2.22
U2AF1-203ENST00000398137 BECN1Q14457 450 aa28.94■■■□□ 2.22
U2AF1-203ENST00000398137 SAFBQ15424 915 aaKnown RBP eCLIP28.94■■■□□ 2.22
U2AF1-203ENST00000398137 NFRKBQ6P4R8 1299 aa28.94■■■□□ 2.22
U2AF1-203ENST00000398137 KRT25Q7Z3Z0 450 aa28.94■■■□□ 2.22
U2AF1-203ENST00000398137 SPRYD3Q8NCJ5 442 aa28.94■■■□□ 2.22
U2AF1-203ENST00000398137 BTBD18B2RXH4 712 aa28.93■■■□□ 2.22
U2AF1-203ENST00000398137 BRDTQ58F21 947 aaPredicted RBP28.93■■■□□ 2.22
U2AF1-203ENST00000398137 EMID1Q96A84 441 aaPredicted RBP28.93■■■□□ 2.22
U2AF1-203ENST00000398137 SCLYQ96I15 445 aa28.93■■■□□ 2.22
U2AF1-203ENST00000398137 CTAGE1Q96RT6 745 aa28.93■■■□□ 2.22
U2AF1-203ENST00000398137 CXXC1Q9P0U4 656 aaPredicted RBP28.93■■■□□ 2.22
U2AF1-203ENST00000398137 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.92■■■□□ 2.22
U2AF1-203ENST00000398137 CCDC194A0A1B0GVG4 234 aa28.92■■■□□ 2.22
U2AF1-203ENST00000398137 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.92■■■□□ 2.22
U2AF1-203ENST00000398137 GRXCR1A8MXD5 290 aa28.92■■■□□ 2.22
U2AF1-203ENST00000398137 LARP1BQ659C4 914 aaKnown RBP28.92■■■□□ 2.22
U2AF1-203ENST00000398137 XRRA1Q6P2D8 792 aa28.92■■■□□ 2.22
U2AF1-203ENST00000398137 PSRC1Q6PGN9 363 aaPredicted RBP28.92■■■□□ 2.22
U2AF1-203ENST00000398137 TNFRSF25Q93038 417 aa28.92■■■□□ 2.22
U2AF1-203ENST00000398137 CDX2Q99626 313 aaPredicted RBP28.92■■■□□ 2.22
U2AF1-203ENST00000398137 RTEL1Q9NZ71 1219 aa28.92■■■□□ 2.22
U2AF1-203ENST00000398137 FAM205CA6NFA0 338 aa28.91■■■□□ 2.22
U2AF1-203ENST00000398137 H3BQV1 296 aa28.91■■■□□ 2.22
U2AF1-203ENST00000398137 SP2Q02086 613 aa28.91■■■□□ 2.22
U2AF1-203ENST00000398137 NONOQ15233 471 aaKnown RBP eCLIP28.91■■■□□ 2.22
U2AF1-203ENST00000398137 FAM47CQ5HY64 1035 aa28.91■■■□□ 2.22
U2AF1-203ENST00000398137 PIK3AP1Q6ZUJ8 805 aa28.91■■■□□ 2.22
U2AF1-203ENST00000398137 CRYGNQ8WXF5 182 aa28.91■■■□□ 2.22
U2AF1-203ENST00000398137 HERVK_113Q902F9 699 aa28.91■■■□□ 2.22
U2AF1-203ENST00000398137 MRVI1Q9Y6F6 885 aa28.91■■■□□ 2.22
U2AF1-203ENST00000398137 GBF1Q92538 1859 aa28.91■■■□□ 2.22
U2AF1-203ENST00000398137 TANC1Q9C0D5 1861 aa28.91■■■□□ 2.22
U2AF1-203ENST00000398137 EARS2Q5JPH6 523 aaKnown RBP28.9■■■□□ 2.22
U2AF1-203ENST00000398137 TBCKQ8TEA7 893 aa28.9■■■□□ 2.22
U2AF1-203ENST00000398137 STAM2O75886 525 aa28.89■■■□□ 2.22
U2AF1-203ENST00000398137 SUPT20HL2P0C7V6 817 aa28.89■■■□□ 2.22
U2AF1-203ENST00000398137 DNAJB2P25686 324 aa28.89■■■□□ 2.22
U2AF1-203ENST00000398137 PBX2P40425 430 aa28.89■■■□□ 2.22
U2AF1-203ENST00000398137 PTPN11Q06124 597 aaPredicted RBP28.89■■■□□ 2.22
U2AF1-203ENST00000398137 INF2Q27J81 1249 aa28.89■■■□□ 2.22
U2AF1-203ENST00000398137 INPP4AQ96PE3 977 aaPredicted RBP28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms