RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 TRAPPC3LQ5T215 181 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 CYB5D1Q6P9G0 228 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 SLC30A10Q6XR72 485 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 TMC4Q7Z404 712 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 PARD3BQ8TEW8 1205 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 TCP11Q8WWU5 503 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 HOOK2Q96ED9 719 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 RRP36Q96EU6 259 aaKnown RBP5.53□□□□□ -1.52
SSR1-202ENST00000397511 DUSP9Q99956 384 aaKnown RBP5.53□□□□□ -1.52
SSR1-202ENST00000397511 SELENOOQ9BVL4 669 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 LRWD1Q9UFC0 647 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 A0A1B0GUL6 1792 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 ARAP2Q8WZ64 1704 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 ROBO1Q9Y6N7 1651 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 NPHP3-ACAD11A0A0J9YXS1 232 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 LRRC10BA6NIK2 292 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 AGPSO00116 658 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 ZEB2O60315 1214 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 RPS6KA4O75676 772 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 RPSAP08865 295 aaKnown RBP5.53□□□□□ -1.52
SSR1-202ENST00000397511 PDHBP11177 359 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 SPAG1Q07617 926 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 E2F5Q15329 346 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 ARL6IP4Q66PJ3 421 aaKnown RBP5.53□□□□□ -1.52
SSR1-202ENST00000397511 SPTY2D1Q68D10 685 aaPredicted RBP5.53□□□□□ -1.52
SSR1-202ENST00000397511 CCDC70Q6NSX1 233 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 TTI2Q6NXR4 508 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 DPP8Q6V1X1 898 aaPredicted RBP5.53□□□□□ -1.52
SSR1-202ENST00000397511 CCDC121Q6ZUS5 278 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 TRMT1LQ7Z2T5 733 aaKnown RBP5.53□□□□□ -1.52
SSR1-202ENST00000397511 KCNK18Q7Z418 384 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 ZNF804AQ7Z570 1209 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 NEK8Q86SG6 692 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 REXO1Q8N1G1 1221 aaKnown RBP5.53□□□□□ -1.52
SSR1-202ENST00000397511 KIAA0895Q8NCT3 520 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 GIMAP8Q8ND71 665 aaPredicted RBP5.53□□□□□ -1.52
SSR1-202ENST00000397511 JAKMIP2Q96AA8 810 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 ZBTB10Q96DT7 871 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 THOC1Q96FV9 657 aaKnown RBP5.53□□□□□ -1.52
SSR1-202ENST00000397511 CDCA7Q9BWT1 371 aaPredicted RBP5.53□□□□□ -1.52
SSR1-202ENST00000397511 MLXIPQ9HAP2 919 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 CD209Q9NNX6 404 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 GGA2Q9UJY4 613 aa5.53□□□□□ -1.52
SSR1-202ENST00000397511 FLT1P17948 1338 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 MYH10P35580 1976 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 PALM3A6NDB9 673 aaPredicted RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 RASSF10A6NK89 507 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 LGALS16A8MUM7 142 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 NCK2O43639 380 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 RBM5P52756 815 aaKnown RBP eCLIP5.52□□□□□ -1.53
SSR1-202ENST00000397511 PSMD2Q13200 908 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 EZH2Q15910 746 aaKnown RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 CALCRLQ16602 461 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 SBK1Q52WX2 424 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 CDCA2Q69YH5 1023 aaPredicted RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 RRAGAQ7L523 313 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 RPUSD2Q8IZ73 545 aaKnown RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 KIRREL3Q8IZU9 778 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 WDR66Q8TBY9 1149 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 SNX29Q8TEQ0 813 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 LMBR1Q8WVP7 490 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 P2RX5Q93086 422 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 RPGRIP1Q96KN7 1286 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 CCDC42Q96M95 316 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 RTFDC1Q9BY42 306 aaPredicted RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 SEMA6BQ9H3T3 888 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 C6orf50Q9HD87 102 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 KBTBD4Q9NVX7 518 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 ZNHIT6Q9NWK9 470 aaKnown RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 THRAP3Q9Y2W1 955 aaKnown RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 PCDHAC2Q9Y5I4 1007 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 SAR1BQ9Y6B6 198 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 LTBP4Q8N2S1 1624 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 MYMKA6NI61 221 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 USP17L15C9J2P7 530 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 USP17L13C9JLJ4 530 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 USP17L11C9JVI0 530 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 USP17L18D6R9N7 530 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 USP17L22D6RA61 530 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 USP17L17D6RBQ6 530 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 USP17L19D6RCP7 530 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 USP17L20D6RJB6 530 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 M0R2N6 131 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 SEMA3EO15041 775 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 PPP1R12BO60237 982 aaPredicted RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 MOCS3O95396 460 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 PCP11498 1178 aaKnown RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 AKR1B1P15121 316 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 GFPT1Q06210 699 aaPredicted RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 USP17L24Q0WX57 530 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 PDCLQ13371 301 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 ECM1Q16610 540 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 TDRD12Q587J7 1177 aaKnown RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 NAA35Q5VZE5 725 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 CAPRIN2Q6IMN6 1127 aaKnown RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 USP17L6PQ6QN14 398 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 ZNF513Q8N8E2 541 aaPredicted RBP5.52□□□□□ -1.53
SSR1-202ENST00000397511 KLHL23Q8NBE8 558 aa5.52□□□□□ -1.53
SSR1-202ENST00000397511 PROCA1Q8NCQ7 364 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms