RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 CCSER1Q9C0I3 900 aa23.82■■□□□ 1.4
CPNE1-204ENST00000397443 BCAS3Q9H6U6 928 aa23.82■■□□□ 1.4
CPNE1-204ENST00000397443 DISC1Q9NRI5 854 aa23.82■■□□□ 1.4
CPNE1-204ENST00000397443 CCDC39Q9UFE4 941 aa23.82■■□□□ 1.4
CPNE1-204ENST00000397443 ASB14A6NK59 587 aa23.82■■□□□ 1.4
CPNE1-204ENST00000397443 DHX15O43143 795 aaKnown RBP23.82■■□□□ 1.4
CPNE1-204ENST00000397443 PLCG1P19174 1290 aa23.82■■□□□ 1.4
CPNE1-204ENST00000397443 STAT6P42226 847 aa23.82■■□□□ 1.4
CPNE1-204ENST00000397443 GRAMD1CQ8IYS0 662 aa23.82■■□□□ 1.4
CPNE1-204ENST00000397443 CALML4Q96GE6 196 aa23.82■■□□□ 1.4
CPNE1-204ENST00000397443 RIT2Q99578 217 aa23.82■■□□□ 1.4
CPNE1-204ENST00000397443 ZSWIM8A7E2V4 1837 aa23.82■■□□□ 1.4
CPNE1-204ENST00000397443 DOCK5Q9H7D0 1870 aa23.81■■□□□ 1.4
CPNE1-204ENST00000397443 CYP4A11Q02928 519 aa23.81■■□□□ 1.4
CPNE1-204ENST00000397443 MORN1Q5T089 497 aa23.81■■□□□ 1.4
CPNE1-204ENST00000397443 MAML3Q96JK9 1138 aa23.81■■□□□ 1.4
CPNE1-204ENST00000397443 LRRC37A2A6NM11 1700 aa23.81■■□□□ 1.4
CPNE1-204ENST00000397443 SPATA31C2B4DYI2 1134 aa23.8■■□□□ 1.4
CPNE1-204ENST00000397443 FOXN1O15353 648 aa23.8■■□□□ 1.4
CPNE1-204ENST00000397443 ACTN4O43707 911 aaKnown RBP23.8■■□□□ 1.4
CPNE1-204ENST00000397443 CYP2B6P20813 491 aa23.8■■□□□ 1.4
CPNE1-204ENST00000397443 PSMC4P43686 418 aa23.8■■□□□ 1.4
CPNE1-204ENST00000397443 SP2Q02086 613 aa23.8■■□□□ 1.4
CPNE1-204ENST00000397443 MAP2K5Q13163 448 aa23.8■■□□□ 1.4
CPNE1-204ENST00000397443 PPP2R5CQ13362 524 aa23.8■■□□□ 1.4
CPNE1-204ENST00000397443 ECM1Q16610 540 aa23.8■■□□□ 1.4
CPNE1-204ENST00000397443 CEP57L1Q8IYX8 460 aa23.8■■□□□ 1.4
CPNE1-204ENST00000397443 IQUBQ8NA54 791 aa23.8■■□□□ 1.4
CPNE1-204ENST00000397443 STAMQ92783 540 aa23.8■■□□□ 1.4
CPNE1-204ENST00000397443 CDHR1Q96JP9 859 aa23.8■■□□□ 1.4
CPNE1-204ENST00000397443 TBC1D22BQ9NU19 505 aa23.8■■□□□ 1.4
CPNE1-204ENST00000397443 SAMM50Q9Y512 469 aa23.8■■□□□ 1.4
CPNE1-204ENST00000397443 CEP350Q5VT06 3117 aa23.8■■□□□ 1.4
CPNE1-204ENST00000397443 MAFGO15525 162 aa23.8■■□□□ 1.4
CPNE1-204ENST00000397443 KCNA2P16389 499 aa23.8■■□□□ 1.4
CPNE1-204ENST00000397443 AFMP43652 599 aa23.8■■□□□ 1.4
CPNE1-204ENST00000397443 LACTBP83111 547 aaPredicted RBP23.8■■□□□ 1.4
CPNE1-204ENST00000397443 GRB10Q13322 594 aa23.8■■□□□ 1.4
CPNE1-204ENST00000397443 E2F4Q16254 413 aa23.8■■□□□ 1.4
CPNE1-204ENST00000397443 LRRC15Q8TF66 581 aa23.8■■□□□ 1.4
CPNE1-204ENST00000397443 RGL1Q9NZL6 768 aa23.8■■□□□ 1.4
CPNE1-204ENST00000397443 A0A087WWV3 80 aa23.79■■□□□ 1.4
CPNE1-204ENST00000397443 POTEB3A0JP26 581 aa23.79■■□□□ 1.4
CPNE1-204ENST00000397443 MED24O75448 989 aa23.79■■□□□ 1.4
CPNE1-204ENST00000397443 POTEBQ6S5H4 581 aa23.79■■□□□ 1.4
CPNE1-204ENST00000397443 ERMNQ8TAM6 284 aa23.79■■□□□ 1.4
CPNE1-204ENST00000397443 TRIM47Q96LD4 638 aa23.79■■□□□ 1.4
CPNE1-204ENST00000397443 PNMA5Q96PV4 448 aa23.79■■□□□ 1.4
CPNE1-204ENST00000397443 EIF2AK1Q9BQI3 630 aaKnown RBP23.79■■□□□ 1.4
CPNE1-204ENST00000397443 SLC5A4Q9NY91 659 aa23.79■■□□□ 1.4
CPNE1-204ENST00000397443 TCEAL9Q9UHQ7 104 aa23.79■■□□□ 1.4
CPNE1-204ENST00000397443 FCGRTP55899 365 aa23.78■■□□□ 1.4
CPNE1-204ENST00000397443 MIER3Q7Z3K6 550 aa23.78■■□□□ 1.4
CPNE1-204ENST00000397443 TIGD1Q96MW7 591 aa23.78■■□□□ 1.4
CPNE1-204ENST00000397443 PDGFCQ9NRA1 345 aa23.78■■□□□ 1.4
CPNE1-204ENST00000397443 SLFN14P0C7P3 912 aa23.78■■□□□ 1.4
CPNE1-204ENST00000397443 SP3Q02447 781 aa23.78■■□□□ 1.4
CPNE1-204ENST00000397443 PNOCQ13519 176 aa23.78■■□□□ 1.4
CPNE1-204ENST00000397443 DHX8Q14562 1220 aaKnown RBP23.78■■□□□ 1.4
CPNE1-204ENST00000397443 LY6KQ17RY6 165 aa23.78■■□□□ 1.4
CPNE1-204ENST00000397443 NAALADL2Q58DX5 795 aa23.78■■□□□ 1.4
CPNE1-204ENST00000397443 HAUS3Q68CZ6 603 aa23.78■■□□□ 1.4
CPNE1-204ENST00000397443 CYFIP1Q7L576 1253 aa23.78■■□□□ 1.4
CPNE1-204ENST00000397443 CATSPER3Q86XQ3 398 aa23.78■■□□□ 1.4
CPNE1-204ENST00000397443 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.78■■□□□ 1.4
CPNE1-204ENST00000397443 KIAA1024Q9UPX6 916 aa23.78■■□□□ 1.4
CPNE1-204ENST00000397443 TELO2Q9Y4R8 837 aa23.78■■□□□ 1.4
CPNE1-204ENST00000397443 MGAMO43451 1857 aa23.77■■□□□ 1.4
CPNE1-204ENST00000397443 POTEFA5A3E0 1075 aa23.77■■□□□ 1.4
CPNE1-204ENST00000397443 CTTNQ14247 550 aaKnown RBP23.77■■□□□ 1.4
CPNE1-204ENST00000397443 CCL14Q16627 93 aa23.77■■□□□ 1.4
CPNE1-204ENST00000397443 POTEGQ6S5H5 508 aa23.77■■□□□ 1.4
CPNE1-204ENST00000397443 MORC4Q8TE76 937 aa23.77■■□□□ 1.4
CPNE1-204ENST00000397443 ARIH2O95376 493 aa23.76■■□□□ 1.39
CPNE1-204ENST00000397443 CCNE2O96020 404 aa23.76■■□□□ 1.39
CPNE1-204ENST00000397443 UBA1P22314 1058 aaKnown RBP23.76■■□□□ 1.39
CPNE1-204ENST00000397443 CASP1P29466 404 aa23.76■■□□□ 1.39
CPNE1-204ENST00000397443 ICAM3P32942 547 aa23.76■■□□□ 1.39
CPNE1-204ENST00000397443 DYDC2Q96IM9 177 aa23.76■■□□□ 1.39
CPNE1-204ENST00000397443 PYM1Q9BRP8 204 aaKnown RBP23.76■■□□□ 1.39
CPNE1-204ENST00000397443 TINF2Q9BSI4 451 aa23.76■■□□□ 1.39
CPNE1-204ENST00000397443 JPH1Q9HDC5 661 aaPredicted RBP23.76■■□□□ 1.39
CPNE1-204ENST00000397443 FLRT1Q9NZU1 646 aa23.76■■□□□ 1.39
CPNE1-204ENST00000397443 GJD2Q9UKL4 321 aa23.76■■□□□ 1.39
CPNE1-204ENST00000397443 DIS3Q9Y2L1 958 aaKnown RBP23.76■■□□□ 1.39
CPNE1-204ENST00000397443 PRR29P0C7W0 189 aa23.76■■□□□ 1.39
CPNE1-204ENST00000397443 HSPA6P17066 643 aa23.76■■□□□ 1.39
CPNE1-204ENST00000397443 RGS2P41220 211 aa23.76■■□□□ 1.39
CPNE1-204ENST00000397443 CAP1Q01518 475 aa23.76■■□□□ 1.39
CPNE1-204ENST00000397443 TMEM63BQ5T3F8 832 aa23.76■■□□□ 1.39
CPNE1-204ENST00000397443 PDXDC2PQ6P474 469 aa23.76■■□□□ 1.39
CPNE1-204ENST00000397443 B3GNT9Q6UX72 402 aa23.76■■□□□ 1.39
CPNE1-204ENST00000397443 KCNK18Q7Z418 384 aa23.76■■□□□ 1.39
CPNE1-204ENST00000397443 ZNF467Q7Z7K2 595 aaPredicted RBP23.76■■□□□ 1.39
CPNE1-204ENST00000397443 TPH2Q8IWU9 490 aa23.76■■□□□ 1.39
CPNE1-204ENST00000397443 BANK1Q8NDB2 785 aa23.76■■□□□ 1.39
CPNE1-204ENST00000397443 ANP32EQ9BTT0 268 aa23.76■■□□□ 1.39
CPNE1-204ENST00000397443 KDM3AQ9Y4C1 1321 aa23.75■■□□□ 1.39
CPNE1-204ENST00000397443 ZNF236Q9UL36 1845 aa23.75■■□□□ 1.39
CPNE1-204ENST00000397443 SNAI1O95863 264 aaPredicted RBP23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms