RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 XPO4Q9C0E2 1151 aaKnown RBP13.3□□□□□ -0.28
SMU1-201ENST00000397149 TADA3O75528 432 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 GUCA1CO95843 209 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 FAM160B1Q5W0V3 765 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 EGFL8Q99944 293 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 TRIM45Q9H8W5 580 aaPredicted RBP13.3□□□□□ -0.28
SMU1-201ENST00000397149 KDM3AQ9Y4C1 1321 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 GSNP06396 782 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 POU5F1BQ06416 359 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 FBXO11Q86XK2 927 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 XAGE2Q96GT9 111 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 PIDD1Q9HB75 910 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 TMEM161AQ9NX61 479 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 RNF103-CHMP3A0A140T963 221 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 SLC27A2O14975 620 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 XPOTO43592 962 aaKnown RBP13.29□□□□□ -0.28
SMU1-201ENST00000397149 HSPA1AP0DMV8 641 aaKnown RBP13.29□□□□□ -0.28
SMU1-201ENST00000397149 HSPA1BP0DMV9 641 aaKnown RBP13.29□□□□□ -0.28
SMU1-201ENST00000397149 MARK3P27448 753 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 CAPN10Q9HC96 672 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 DCTN3O75935 186 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 IL2RBP14784 551 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 DSTYKQ6XUX3 929 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 NDUFAF2Q8N183 169 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 SELENONQ9NZV5 590 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 ZNF212Q9UDV6 495 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 ABT1Q9ULW3 272 aaKnown RBP13.29□□□□□ -0.28
SMU1-201ENST00000397149 TRAF3IP3Q9Y228 551 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 F8W8V4 182 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 DAB1O75553 588 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 AFPP02771 609 aaKnown RBP13.29□□□□□ -0.28
SMU1-201ENST00000397149 ZNF827Q17R98 1081 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 KRT77Q7Z794 578 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 SPICE1Q8N0Z3 855 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 IFT43Q96FT9 208 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 HEXIM2Q96MH2 286 aaKnown RBP13.29□□□□□ -0.28
SMU1-201ENST00000397149 NDE1Q9NXR1 346 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 TTC21BQ7Z4L5 1316 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 PPARGP37231 505 aaPredicted RBP13.29□□□□□ -0.28
SMU1-201ENST00000397149 OR8K1Q8NGG5 319 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 RAD50Q92878 1312 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 STXBP2Q15833 593 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 C8orf58Q8NAV2 365 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 TTC17Q96AE7 1141 aa13.29□□□□□ -0.28
SMU1-201ENST00000397149 H2AFZP0C0S5 128 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 PWP1Q13610 501 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 H2AFVQ71UI9 128 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 GPKOWQ92917 476 aaPredicted RBP eCLIP13.28□□□□□ -0.28
SMU1-201ENST00000397149 PPP1R36Q96LQ0 422 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 DONSONQ9NYP3 566 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 STMN3Q9NZ72 180 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 ADA2Q9NZK5 511 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 ACEP12821 1306 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 WDR7Q9Y4E6 1490 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 A0A0G2JND7 137 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 SOX11P35716 441 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 SLC24A3Q9HC58 644 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 NDFIP2Q9NV92 336 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 KCNG1Q9UIX4 513 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 FGD6Q6ZV73 1430 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 E5RI56 91 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 CACNB1Q02641 598 aaPredicted RBP13.28□□□□□ -0.28
SMU1-201ENST00000397149 PTPN21Q16825 1174 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 ODR4Q5SWX8 454 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 ADCK1Q86TW2 530 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 INPP5DQ92835 1189 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 SAMSN1Q9NSI8 373 aaKnown RBP13.28□□□□□ -0.28
SMU1-201ENST00000397149 USE1Q9NZ43 259 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 AARSP49588 968 aaKnown RBP eCLIP13.28□□□□□ -0.28
SMU1-201ENST00000397149 ARL4DP49703 201 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 TRIM32Q13049 653 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 TFDP1Q14186 410 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 KRT40Q6A162 431 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 C1orf131Q8NDD1 294 aaKnown RBP13.28□□□□□ -0.28
SMU1-201ENST00000397149 ALDH1L1O75891 902 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 E2F4Q16254 413 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 BTNL9Q6UXG8 535 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 KCNV2Q8TDN2 545 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 ASPSCR1Q9BZE9 553 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 EPB41L5Q9HCM4 733 aa13.28□□□□□ -0.28
SMU1-201ENST00000397149 PRPSAP2O60256 369 aa13.27□□□□□ -0.28
SMU1-201ENST00000397149 TAC1P20366 129 aa13.27□□□□□ -0.28
SMU1-201ENST00000397149 MFAP3P55082 362 aa13.27□□□□□ -0.28
SMU1-201ENST00000397149 SH3BP5LQ7L8J4 393 aa13.27□□□□□ -0.28
SMU1-201ENST00000397149 PGBD3Q8N328 593 aa13.27□□□□□ -0.28
SMU1-201ENST00000397149 CLIC2O15247 247 aa13.27□□□□□ -0.28
SMU1-201ENST00000397149 SPAG7O75391 227 aa13.27□□□□□ -0.28
SMU1-201ENST00000397149 ADALQ6DHV7 355 aa13.27□□□□□ -0.28
SMU1-201ENST00000397149 KIAA0825Q8IV33 1275 aa13.27□□□□□ -0.28
SMU1-201ENST00000397149 TESK2Q96S53 571 aa13.27□□□□□ -0.28
SMU1-201ENST00000397149 ATP8B3O60423 1300 aa13.27□□□□□ -0.28
SMU1-201ENST00000397149 CTNND1O60716 968 aaKnown RBP13.27□□□□□ -0.29
SMU1-201ENST00000397149 C2orf54Q08AI8 447 aa13.27□□□□□ -0.29
SMU1-201ENST00000397149 EXOC3L4Q17RC7 722 aa13.27□□□□□ -0.29
SMU1-201ENST00000397149 ANKRD49Q8WVL7 239 aa13.27□□□□□ -0.29
SMU1-201ENST00000397149 TSC22D3Q99576 134 aa13.27□□□□□ -0.29
SMU1-201ENST00000397149 IMPACTQ9P2X3 320 aa13.27□□□□□ -0.29
SMU1-201ENST00000397149 SCN4BQ8IWT1 228 aa13.27□□□□□ -0.29
SMU1-201ENST00000397149 FAM227BQ96M60 508 aa13.27□□□□□ -0.29
SMU1-201ENST00000397149 RASSF10A6NK89 507 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms