RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 CEP85LQ5SZL2 805 aa16.98■□□□□ 0.31
GNE-202ENST00000396594 GKAP1Q5VSY0 366 aaPredicted RBP16.98■□□□□ 0.31
GNE-202ENST00000396594 BARGINQ6ZT62 677 aa16.98■□□□□ 0.31
GNE-202ENST00000396594 MAEAQ7L5Y9 396 aa16.98■□□□□ 0.31
GNE-202ENST00000396594 MMS19Q96T76 1030 aa16.98■□□□□ 0.31
GNE-202ENST00000396594 CDC23Q9UJX2 597 aa16.98■□□□□ 0.31
GNE-202ENST00000396594 GINS2Q9Y248 185 aa16.98■□□□□ 0.31
GNE-202ENST00000396594 CD163L1Q9NR16 1453 aa16.98■□□□□ 0.31
GNE-202ENST00000396594 SMARCA1P28370 1054 aa16.98■□□□□ 0.31
GNE-202ENST00000396594 EIF3BP55884 814 aaKnown RBP16.98■□□□□ 0.31
GNE-202ENST00000396594 GLE1Q53GS7 698 aaKnown RBP16.98■□□□□ 0.31
GNE-202ENST00000396594 VSIG1Q86XK7 387 aa16.98■□□□□ 0.31
GNE-202ENST00000396594 CEP170P1Q96L14 293 aa16.98■□□□□ 0.31
GNE-202ENST00000396594 MAP3K14Q99558 947 aa16.98■□□□□ 0.31
GNE-202ENST00000396594 MIF4GDA9UHW6 222 aaKnown RBP16.98■□□□□ 0.31
GNE-202ENST00000396594 TBC1D8O95759 1140 aa16.98■□□□□ 0.31
GNE-202ENST00000396594 ADCY8P40145 1251 aa16.98■□□□□ 0.31
GNE-202ENST00000396594 ARL4AP40617 200 aa16.98■□□□□ 0.31
GNE-202ENST00000396594 RASGRF1Q13972 1273 aa16.98■□□□□ 0.31
GNE-202ENST00000396594 ARL13BQ3SXY8 428 aa16.98■□□□□ 0.31
GNE-202ENST00000396594 RUBCNQ92622 972 aa16.98■□□□□ 0.31
GNE-202ENST00000396594 FAM96AQ9H5X1 160 aa16.98■□□□□ 0.31
GNE-202ENST00000396594 TOPORSQ9NS56 1045 aaPredicted RBP16.98■□□□□ 0.31
GNE-202ENST00000396594 PRKAG2Q9UGJ0 569 aa16.98■□□□□ 0.31
GNE-202ENST00000396594 KCNK3O14649 394 aa16.98■□□□□ 0.31
GNE-202ENST00000396594 RIOK3O14730 519 aaKnown RBP16.98■□□□□ 0.31
GNE-202ENST00000396594 STXBP2Q15833 593 aa16.98■□□□□ 0.31
GNE-202ENST00000396594 IPO5O00410 1097 aaKnown RBP16.97■□□□□ 0.31
GNE-202ENST00000396594 STX2P32856 288 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 COG7P83436 770 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 TTC13Q8NBP0 860 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 HVCN1Q96D96 273 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 CNOT10Q9H9A5 744 aaKnown RBP16.97■□□□□ 0.31
GNE-202ENST00000396594 KLHL14Q9P2G3 628 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 PCDHB4Q9Y5E5 795 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 WDR64B1ANS9 1081 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 SART1O43290 800 aaKnown RBP16.97■□□□□ 0.31
GNE-202ENST00000396594 CYP19A1P11511 503 aaPredicted RBP16.97■□□□□ 0.31
GNE-202ENST00000396594 KRT3P12035 628 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 USP11P51784 963 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 CASC4Q6P4E1 433 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 FASTKD5Q7L8L6 764 aaKnown RBP16.97■□□□□ 0.31
GNE-202ENST00000396594 KLHL7Q8IXQ5 586 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 MICALL1Q8N3F8 863 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 CABS1Q96KC9 395 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 VCX3AQ9NNX9 186 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 STRIP2Q9ULQ0 834 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 CTNNA1P35221 906 aaKnown RBP16.97■□□□□ 0.31
GNE-202ENST00000396594 CRKP46108 304 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 SNRPFP62306 86 aaKnown RBP16.97■□□□□ 0.31
GNE-202ENST00000396594 SARM1Q6SZW1 724 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 GCNAQ96QF7 691 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 PIGSQ96S52 555 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 ATP6V0A4Q9HBG4 840 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 A0A1B0GUA9 196 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 CCDC188H7C350 402 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 PLA2G4BP0C869 781 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 RESTQ13127 1097 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 TRPV6Q9H1D0 765 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 EMILIN3Q9NT22 766 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 PALD1Q9ULE6 856 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 CLIC4Q9Y696 253 aa16.97■□□□□ 0.31
GNE-202ENST00000396594 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.96■□□□□ 0.31
GNE-202ENST00000396594 TBXAS1P24557 533 aaPredicted RBP16.96■□□□□ 0.31
GNE-202ENST00000396594 EPHB4P54760 987 aa16.96■□□□□ 0.31
GNE-202ENST00000396594 SLC10A4Q96EP9 437 aa16.96■□□□□ 0.31
GNE-202ENST00000396594 PPANQ9NQ55 473 aaKnown RBP16.96■□□□□ 0.31
GNE-202ENST00000396594 ST7Q9NRC1 585 aa16.96■□□□□ 0.31
GNE-202ENST00000396594 SMIM23A6NLE4 172 aa16.96■□□□□ 0.31
GNE-202ENST00000396594 PRELPP51888 382 aa16.96■□□□□ 0.31
GNE-202ENST00000396594 CAV1Q03135 178 aa16.96■□□□□ 0.31
GNE-202ENST00000396594 BIRC2Q13490 618 aa16.96■□□□□ 0.31
GNE-202ENST00000396594 RPF1Q9H9Y2 349 aaKnown RBP16.96■□□□□ 0.31
GNE-202ENST00000396594 PCDHA5Q9Y5H7 936 aa16.96■□□□□ 0.31
GNE-202ENST00000396594 INPP5BP32019 993 aa16.96■□□□□ 0.31
GNE-202ENST00000396594 PHKA2P46019 1235 aa16.96■□□□□ 0.31
GNE-202ENST00000396594 PHLDB3Q6NSJ2 640 aa16.96■□□□□ 0.31
GNE-202ENST00000396594 TRIM72Q6ZMU5 477 aa16.96■□□□□ 0.31
GNE-202ENST00000396594 RNF207Q6ZRF8 634 aa16.96■□□□□ 0.31
GNE-202ENST00000396594 NSUN6Q8TEA1 469 aaKnown RBP16.96■□□□□ 0.31
GNE-202ENST00000396594 OSBP2Q969R2 916 aa16.96■□□□□ 0.31
GNE-202ENST00000396594 EDC3Q96F86 508 aaKnown RBP16.96■□□□□ 0.31
GNE-202ENST00000396594 Q9H521 79 aa16.96■□□□□ 0.31
GNE-202ENST00000396594 AKT3Q9Y243 479 aa16.96■□□□□ 0.31
GNE-202ENST00000396594 PGRMC1O00264 195 aaKnown RBP16.96■□□□□ 0.3
GNE-202ENST00000396594 CASQ2O14958 399 aaPredicted RBP16.96■□□□□ 0.3
GNE-202ENST00000396594 MXI1P50539 228 aa16.96■□□□□ 0.3
GNE-202ENST00000396594 IGBP1P78318 339 aa16.96■□□□□ 0.3
GNE-202ENST00000396594 XRRA1Q6P2D8 792 aa16.96■□□□□ 0.3
GNE-202ENST00000396594 TRMT44Q8IYL2 757 aaKnown RBP16.96■□□□□ 0.3
GNE-202ENST00000396594 SLC39A2Q9NP94 309 aa16.96■□□□□ 0.3
GNE-202ENST00000396594 DDX41Q9UJV9 622 aaKnown RBP16.96■□□□□ 0.3
GNE-202ENST00000396594 ASB14A6NK59 587 aa16.95■□□□□ 0.3
GNE-202ENST00000396594 MYBL1P10243 752 aa16.95■□□□□ 0.3
GNE-202ENST00000396594 RBM46Q8TBY0 533 aaKnown RBP16.95■□□□□ 0.3
GNE-202ENST00000396594 SUGCTQ9HAC7 445 aa16.95■□□□□ 0.3
GNE-202ENST00000396594 DISC1Q9NRI5 854 aa16.95■□□□□ 0.3
GNE-202ENST00000396594 KCND2Q9NZV8 630 aa16.95■□□□□ 0.3
GNE-202ENST00000396594 ANAPC5Q9UJX4 755 aa16.95■□□□□ 0.3
GNE-202ENST00000396594 LRRC7Q96NW7 1537 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms