RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 MRPL40Q9NQ50 206 aaKnown RBP15.07■□□□□ 0
COL4A3-202ENST00000396578 SEPT9Q9UHD8 586 aaPredicted RBP15.07■□□□□ 0
COL4A3-202ENST00000396578 NEK2P51955 445 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 TEX12Q9BXU0 123 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 KIF9Q9HAQ2 790 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 E9PMD0 336 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 F8W8V4 182 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 GCP02774 474 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 ZFXP17010 805 aaPredicted RBP15.07■□□□□ 0
COL4A3-202ENST00000396578 TFDP1Q14186 410 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 P2RX5Q93086 422 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 TMEM60Q9H2L4 133 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 TRIM33Q9UPN9 1127 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 GRIN2AQ12879 1464 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 SOWAHDA6NJG2 315 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 MYL1P05976 194 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 CLCN6P51797 869 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 DNAJC24Q6P3W2 148 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 DHX38Q92620 1227 aaKnown RBP15.07■□□□□ 0
COL4A3-202ENST00000396578 USP40Q9NVE5 1235 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 A0A0D9SFI3 127 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 BTBD18B2RXH4 712 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 RSRC2Q7L4I2 434 aaKnown RBP15.07■□□□□ 0
COL4A3-202ENST00000396578 SYT2Q8N9I0 419 aaPredicted RBP15.07■□□□□ 0
COL4A3-202ENST00000396578 SLC52A2Q9HAB3 445 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 THRAP3Q9Y2W1 955 aaKnown RBP15.07■□□□□ 0
COL4A3-202ENST00000396578 COL17A1Q9UMD9 1497 aaPredicted RBP15.07■□□□□ 0
COL4A3-202ENST00000396578 SLC4A1P02730 911 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 ADD1P35611 737 aaKnown RBP15.06■□□□□ 0
COL4A3-202ENST00000396578 LRRC47Q8N1G4 583 aaKnown RBP15.06■□□□□ 0
COL4A3-202ENST00000396578 CALN1Q9BXU9 219 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 PITPNM3Q9BZ71 974 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 PCDHA13Q9Y5I0 950 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 EDC4Q6P2E9 1401 aaKnown RBP15.06■□□□□ 0
COL4A3-202ENST00000396578 HSPD1P10809 573 aaKnown RBP15.06■□□□□ 0
COL4A3-202ENST00000396578 MDM2Q00987 491 aaPredicted RBP15.06■□□□□ 0
COL4A3-202ENST00000396578 FSCBQ5H9T9 825 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 NBPF10Q6P3W6 841 aaKnown RBP15.06■□□□□ 0
COL4A3-202ENST00000396578 CACTINQ8WUQ7 758 aaKnown RBP15.06■□□□□ 0
COL4A3-202ENST00000396578 RWDD2AQ9UIY3 292 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 TNKSO95271 1327 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 POLA2Q14181 598 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 ANGPTL8Q6UXH0 198 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 SNX25Q9H3E2 840 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 SORBS3O60504 671 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 TRAPPC10P48553 1259 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 DYNC1I2Q13409 638 aaKnown RBP15.06■□□□□ 0
COL4A3-202ENST00000396578 MFSD14BQ5SR56 506 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 NUGGCQ68CJ6 796 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 FAM133AQ8N9E0 248 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 TESK2Q96S53 571 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 BIVM-ERCC5R4GMW8 1640 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 ALAS1P13196 640 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 HDLBPQ00341 1268 aaKnown RBP15.06■□□□□ 0
COL4A3-202ENST00000396578 PAMP19021 973 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 PTH1RQ03431 593 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 DLGAP5Q15398 846 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 EMBQ6PCB8 327 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 PANX2Q96RD6 677 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 WARS2Q9UGM6 360 aaKnown RBP15.06■□□□□ 0
COL4A3-202ENST00000396578 CCNL1Q9UK58 526 aaPredicted RBP15.06■□□□□ 0
COL4A3-202ENST00000396578 CA4P22748 312 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 ALDH1B1P30837 517 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 AP2B1P63010 937 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 TRPV6Q9H1D0 765 aa15.06■□□□□ 0
COL4A3-202ENST00000396578 TAC1P20366 129 aa15.05■□□□□ 0
COL4A3-202ENST00000396578 IFNA8P32881 189 aa15.05■□□□□ 0
COL4A3-202ENST00000396578 TNFAIP1Q13829 316 aa15.05■□□□□ 0
COL4A3-202ENST00000396578 CERKLQ49MI3 558 aaPredicted RBP15.05■□□□□ 0
COL4A3-202ENST00000396578 NRBP2Q9NSY0 501 aa15.05■□□□□ 0
COL4A3-202ENST00000396578 POLR3EQ9NVU0 708 aa15.05■□□□□ 0
COL4A3-202ENST00000396578 KIF17Q9P2E2 1029 aa15.05■□□□□ 0
COL4A3-202ENST00000396578 CSADQ9Y600 493 aa15.05■□□□□ 0
COL4A3-202ENST00000396578 COBLO75128 1261 aa15.05■□□□□ 0
COL4A3-202ENST00000396578 E2F6O75461 281 aa15.05■□□□□ 0
COL4A3-202ENST00000396578 ACSL3O95573 720 aa15.05■□□□□ 0
COL4A3-202ENST00000396578 FTCDO95954 541 aa15.05■□□□□ 0
COL4A3-202ENST00000396578 MMEP08473 750 aa15.05■□□□□ 0
COL4A3-202ENST00000396578 FKBP3Q00688 224 aaKnown RBP15.05■□□□□ 0
COL4A3-202ENST00000396578 MMS22LQ6ZRQ5 1243 aa15.05■□□□□ 0
COL4A3-202ENST00000396578 SDR42E1Q8WUS8 393 aa15.05■□□□□ 0
COL4A3-202ENST00000396578 GPATCH8Q9UKJ3 1502 aaKnown RBP15.05■□□□□ 0
COL4A3-202ENST00000396578 L3MBTL1Q9Y468 752 aa15.05■□□□□ -0
COL4A3-202ENST00000396578 MAST1Q9Y2H9 1570 aa15.05■□□□□ -0
COL4A3-202ENST00000396578 TADA2BQ86TJ2 420 aa15.05■□□□□ -0
COL4A3-202ENST00000396578 NCLNQ969V3 563 aa15.05■□□□□ -0
COL4A3-202ENST00000396578 SUN2Q9UH99 717 aa15.05■□□□□ -0
COL4A3-202ENST00000396578 SNX5Q9Y5X3 404 aa15.05■□□□□ -0
COL4A3-202ENST00000396578 A2MP01023 1474 aa15.05■□□□□ -0
COL4A3-202ENST00000396578 PODXLO00592 558 aa15.05■□□□□ -0
COL4A3-202ENST00000396578 PDHA1P08559 390 aa15.05■□□□□ -0
COL4A3-202ENST00000396578 DAB2P98082 770 aa15.05■□□□□ -0
COL4A3-202ENST00000396578 NEURL1BA8MQ27 555 aa15.05■□□□□ -0
COL4A3-202ENST00000396578 ACCSQ96QU6 501 aa15.05■□□□□ -0
COL4A3-202ENST00000396578 ZBTB18Q99592 522 aa15.05■□□□□ -0
COL4A3-202ENST00000396578 TRIM55Q9BYV6 548 aa15.05■□□□□ -0
COL4A3-202ENST00000396578 PRPSAP2O60256 369 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 KRT4P19013 534 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 PPARGP37231 505 aaPredicted RBP15.04■□□□□ -0
COL4A3-202ENST00000396578 HDAC4P56524 1084 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms