RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 ZNF536O15090 1300 aa13.5□□□□□ -0.25
ITGB1-202ENST00000396033 CYP11B2P19099 503 aa13.5□□□□□ -0.25
ITGB1-202ENST00000396033 CYP4A11Q02928 519 aa13.5□□□□□ -0.25
ITGB1-202ENST00000396033 RAD51AP2Q09MP3 1159 aa13.5□□□□□ -0.25
ITGB1-202ENST00000396033 ANGEL2Q5VTE6 544 aaKnown RBP13.5□□□□□ -0.25
ITGB1-202ENST00000396033 GLIS3Q8NEA6 775 aa13.5□□□□□ -0.25
ITGB1-202ENST00000396033 DNM3Q9UQ16 869 aa13.5□□□□□ -0.25
ITGB1-202ENST00000396033 SOWAHDA6NJG2 315 aa13.5□□□□□ -0.25
ITGB1-202ENST00000396033 CTIFO43310 598 aaKnown RBP13.5□□□□□ -0.25
ITGB1-202ENST00000396033 SPATA31C1P0DKV0 1188 aa13.5□□□□□ -0.25
ITGB1-202ENST00000396033 SLC12A3P55017 1021 aa13.5□□□□□ -0.25
ITGB1-202ENST00000396033 LRCH2Q5VUJ6 765 aa13.5□□□□□ -0.25
ITGB1-202ENST00000396033 MYOCDQ8IZQ8 938 aa13.5□□□□□ -0.25
ITGB1-202ENST00000396033 FLOT1O75955 427 aa13.5□□□□□ -0.25
ITGB1-202ENST00000396033 PABPC4Q13310 644 aaKnown RBP eCLIP13.5□□□□□ -0.251e-8■□□□□ 8.9
ITGB1-202ENST00000396033 APOBEC3FQ8IUX4 373 aaKnown RBP13.5□□□□□ -0.25
ITGB1-202ENST00000396033 CPXCR1Q8N123 301 aa13.5□□□□□ -0.25
ITGB1-202ENST00000396033 TSG101Q99816 390 aa13.5□□□□□ -0.25
ITGB1-202ENST00000396033 TBC1D7Q9P0N9 293 aa13.5□□□□□ -0.25
ITGB1-202ENST00000396033 A0A1W2PQC6 194 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 CHMP2AO43633 222 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 VCAM1P19320 739 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 DNM2P50570 870 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 PSMC6P62333 389 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 LRRC63Q05C16 580 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 CEP55Q53EZ4 464 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 REXO1L1PQ8IX06 675 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 ZNF507Q8TCN5 953 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 EIF2AK1Q9BQI3 630 aaKnown RBP13.49□□□□□ -0.25
ITGB1-202ENST00000396033 UTRNP46939 3433 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 FGFR1OPO95684 399 aaKnown RBP13.49□□□□□ -0.25
ITGB1-202ENST00000396033 MTF1Q14872 753 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 HERC4Q5GLZ8 1057 aaPredicted RBP13.49□□□□□ -0.25
ITGB1-202ENST00000396033 PRAMEF18Q5VWM3 479 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 SYT10Q6XYQ8 523 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 TRPM4Q8TD43 1214 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 ZFP91Q96JP5 570 aaPredicted RBP13.49□□□□□ -0.25
ITGB1-202ENST00000396033 DESI2Q9BSY9 194 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 NOC4LQ9BVI4 516 aaKnown RBP13.49□□□□□ -0.25
ITGB1-202ENST00000396033 ZHX3Q9H4I2 956 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 ABHD10Q9NUJ1 306 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 CTDP1Q9Y5B0 961 aaPredicted RBP13.49□□□□□ -0.25
ITGB1-202ENST00000396033 DOCK1Q14185 1865 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 EML1O00423 815 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 NFIBO00712 420 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 ALAS1P13196 640 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 USP14P54578 494 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 SLC30A10Q6XR72 485 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 WRNIP1Q96S55 665 aa13.49□□□□□ -0.25
ITGB1-202ENST00000396033 POLR3CQ9BUI4 534 aaPredicted RBP13.49□□□□□ -0.25
ITGB1-202ENST00000396033 RPAP3Q9H6T3 665 aaPredicted RBP13.49□□□□□ -0.25
ITGB1-202ENST00000396033 RAVER2Q9HCJ3 691 aaKnown RBP13.49□□□□□ -0.25
ITGB1-202ENST00000396033 HSD17B4P51659 736 aa13.48□□□□□ -0.25
ITGB1-202ENST00000396033 SETQ01105 290 aaPredicted RBP13.48□□□□□ -0.25
ITGB1-202ENST00000396033 SCYL3Q8IZE3 742 aa13.48□□□□□ -0.25
ITGB1-202ENST00000396033 SLC5A5Q92911 643 aa13.48□□□□□ -0.25
ITGB1-202ENST00000396033 SLC38A10Q9HBR0 1119 aa13.48□□□□□ -0.25
ITGB1-202ENST00000396033 HOMER2Q9NSB8 354 aa13.48□□□□□ -0.25
ITGB1-202ENST00000396033 PITPNM2Q9BZ72 1349 aa13.48□□□□□ -0.25
ITGB1-202ENST00000396033 GAS7O60861 476 aa13.48□□□□□ -0.25
ITGB1-202ENST00000396033 TUBB4AP04350 444 aa13.48□□□□□ -0.25
ITGB1-202ENST00000396033 SPP2Q13103 211 aa13.48□□□□□ -0.25
ITGB1-202ENST00000396033 ARSHQ5FYA8 562 aa13.48□□□□□ -0.25
ITGB1-202ENST00000396033 SYT2Q8N9I0 419 aaPredicted RBP13.48□□□□□ -0.25
ITGB1-202ENST00000396033 PICK1Q9NRD5 415 aa13.48□□□□□ -0.25
ITGB1-202ENST00000396033 EMILIN3Q9NT22 766 aa13.48□□□□□ -0.25
ITGB1-202ENST00000396033 RGL1Q9NZL6 768 aa13.48□□□□□ -0.25
ITGB1-202ENST00000396033 PPP1R9AQ9ULJ8 1098 aa13.48□□□□□ -0.25
ITGB1-202ENST00000396033 GOLGA6L9A6NEM1 432 aa13.48□□□□□ -0.25
ITGB1-202ENST00000396033 PSMD10O75832 226 aa13.48□□□□□ -0.25
ITGB1-202ENST00000396033 KIF20AO95235 890 aa13.48□□□□□ -0.25
ITGB1-202ENST00000396033 KRT9P35527 623 aa13.48□□□□□ -0.25
ITGB1-202ENST00000396033 NCBP1Q09161 790 aaKnown RBP13.48□□□□□ -0.25
ITGB1-202ENST00000396033 OTOP1Q7RTM1 612 aa13.48□□□□□ -0.25
ITGB1-202ENST00000396033 MCF2L2Q86YR7 1114 aa13.48□□□□□ -0.25
ITGB1-202ENST00000396033 ZKSCAN4Q969J2 545 aaPredicted RBP13.48□□□□□ -0.25
ITGB1-202ENST00000396033 ZNF577Q9BSK1 485 aa13.48□□□□□ -0.25
ITGB1-202ENST00000396033 FGFBP2Q9BYJ0 223 aa13.48□□□□□ -0.25
ITGB1-202ENST00000396033 RNF225M0QZC1 329 aaPredicted RBP13.47□□□□□ -0.25
ITGB1-202ENST00000396033 TBC1D8BQ0IIM8 1120 aa13.47□□□□□ -0.25
ITGB1-202ENST00000396033 RAD9BQ6WBX8 426 aa13.47□□□□□ -0.25
ITGB1-202ENST00000396033 CLEC4DQ8WXI8 215 aa13.47□□□□□ -0.25
ITGB1-202ENST00000396033 AS3MTQ9HBK9 375 aa13.47□□□□□ -0.25
ITGB1-202ENST00000396033 GGA3Q9NZ52 723 aa13.47□□□□□ -0.25
ITGB1-202ENST00000396033 FZD1Q9UP38 647 aa13.47□□□□□ -0.25
ITGB1-202ENST00000396033 PPP2R5CQ13362 524 aa13.47□□□□□ -0.25
ITGB1-202ENST00000396033 MIIPQ5JXC2 388 aa13.47□□□□□ -0.25
ITGB1-202ENST00000396033 FKBP15Q5T1M5 1219 aa13.47□□□□□ -0.25
ITGB1-202ENST00000396033 ARHGAP27Q6ZUM4 889 aa13.47□□□□□ -0.25
ITGB1-202ENST00000396033 BHMT2Q9H2M3 363 aa13.47□□□□□ -0.25
ITGB1-202ENST00000396033 GPRC5DQ9NZD1 345 aa13.47□□□□□ -0.25
ITGB1-202ENST00000396033 COL20A1Q9P218 1284 aa13.47□□□□□ -0.25
ITGB1-202ENST00000396033 RABGAP1Q9Y3P9 1069 aa13.47□□□□□ -0.25
ITGB1-202ENST00000396033 PCDHA2Q9Y5H9 948 aa13.47□□□□□ -0.25
ITGB1-202ENST00000396033 FRMD3A2A2Y4 597 aa13.47□□□□□ -0.25
ITGB1-202ENST00000396033 VGLL3A8MV65 326 aa13.47□□□□□ -0.25
ITGB1-202ENST00000396033 CCDC175P0C221 793 aa13.47□□□□□ -0.25
ITGB1-202ENST00000396033 ARP10275 920 aa13.47□□□□□ -0.25
ITGB1-202ENST00000396033 ETF1P62495 437 aaKnown RBP13.47□□□□□ -0.25
ITGB1-202ENST00000396033 CTTNQ14247 550 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms