RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 CAND2O75155 1236 aa16.15■□□□□ 0.18
VCPKMT-201ENST00000395859 OTOGLQ3ZCN5 2332 aa16.15■□□□□ 0.18
VCPKMT-201ENST00000395859 SEPT14Q6ZU15 432 aa16.15■□□□□ 0.18
VCPKMT-201ENST00000395859 CHST3Q7LGC8 479 aa16.15■□□□□ 0.18
VCPKMT-201ENST00000395859 IFNL3Q8IZI9 196 aa16.15■□□□□ 0.18
VCPKMT-201ENST00000395859 SPPL3Q8TCT6 385 aa16.15■□□□□ 0.18
VCPKMT-201ENST00000395859 ATP8B4Q8TF62 1192 aa16.15■□□□□ 0.18
VCPKMT-201ENST00000395859 APBB2Q92870 758 aa16.15■□□□□ 0.18
VCPKMT-201ENST00000395859 RPGRIP1Q96KN7 1286 aa16.15■□□□□ 0.18
VCPKMT-201ENST00000395859 STX8Q9UNK0 236 aa16.15■□□□□ 0.18
VCPKMT-201ENST00000395859 KIAA1671Q9BY89 1806 aa16.15■□□□□ 0.18
VCPKMT-201ENST00000395859 B4DLN1 442 aa16.14■□□□□ 0.17
VCPKMT-201ENST00000395859 TDO2P48775 406 aa16.14■□□□□ 0.17
VCPKMT-201ENST00000395859 MRPL12P52815 198 aaKnown RBP16.14■□□□□ 0.17
VCPKMT-201ENST00000395859 PPP4R3BQ5MIZ7 849 aa16.14■□□□□ 0.17
VCPKMT-201ENST00000395859 CRIPAKQ8N1N5 446 aa16.14■□□□□ 0.17
VCPKMT-201ENST00000395859 APPBP2Q92624 585 aa16.14■□□□□ 0.17
VCPKMT-201ENST00000395859 C16orf70Q9BSU1 422 aa16.14■□□□□ 0.17
VCPKMT-201ENST00000395859 MAF1Q9H063 256 aa16.14■□□□□ 0.17
VCPKMT-201ENST00000395859 COL20A1Q9P218 1284 aa16.14■□□□□ 0.17
VCPKMT-201ENST00000395859 MYO10Q9HD67 2058 aa16.14■□□□□ 0.17
VCPKMT-201ENST00000395859 MYH7BA7E2Y1 1941 aa16.13■□□□□ 0.17
VCPKMT-201ENST00000395859 SPTBN2O15020 2390 aa16.13■□□□□ 0.17
VCPKMT-201ENST00000395859 PATL2C9JE40 543 aaKnown RBP16.13■□□□□ 0.17
VCPKMT-201ENST00000395859 PPFIA4O75335 1185 aa16.13■□□□□ 0.17
VCPKMT-201ENST00000395859 ITGB1P05556 798 aa16.13■□□□□ 0.17
VCPKMT-201ENST00000395859 GNAT2P19087 354 aa16.13■□□□□ 0.17
VCPKMT-201ENST00000395859 LAMC2Q13753 1193 aa16.13■□□□□ 0.17
VCPKMT-201ENST00000395859 NAALADL2Q58DX5 795 aa16.13■□□□□ 0.17
VCPKMT-201ENST00000395859 MCTP2Q6DN12 878 aa16.13■□□□□ 0.17
VCPKMT-201ENST00000395859 ITPRIPQ8IWB1 547 aa16.13■□□□□ 0.17
VCPKMT-201ENST00000395859 VN1R2Q8NFZ6 395 aa16.13■□□□□ 0.17
VCPKMT-201ENST00000395859 PNMA2Q9UL42 364 aa16.13■□□□□ 0.17
VCPKMT-201ENST00000395859 M0R2C6 588 aa16.12■□□□□ 0.17
VCPKMT-201ENST00000395859 NRIP1P48552 1158 aa16.12■□□□□ 0.17
VCPKMT-201ENST00000395859 FAM26DQ5JW98 314 aa16.12■□□□□ 0.17
VCPKMT-201ENST00000395859 SIRT2Q8IXJ6 389 aa16.12■□□□□ 0.17
VCPKMT-201ENST00000395859 TBC1D5Q92609 795 aa16.12■□□□□ 0.17
VCPKMT-201ENST00000395859 PPP2R3CQ969Q6 453 aa16.12■□□□□ 0.17
VCPKMT-201ENST00000395859 CNTNAP3BQ96NU0 1288 aa16.12■□□□□ 0.17
VCPKMT-201ENST00000395859 TAAR1Q96RJ0 339 aa16.12■□□□□ 0.17
VCPKMT-201ENST00000395859 CNTNAP3Q9BZ76 1288 aa16.12■□□□□ 0.17
VCPKMT-201ENST00000395859 S1PR5Q9H228 398 aa16.12■□□□□ 0.17
VCPKMT-201ENST00000395859 USP24Q9UPU5 2620 aa16.12■□□□□ 0.17
VCPKMT-201ENST00000395859 MAP1BP46821 2468 aaKnown RBP16.11■□□□□ 0.17
VCPKMT-201ENST00000395859 TREHO43280 583 aa16.11■□□□□ 0.17
VCPKMT-201ENST00000395859 PPARAQ07869 468 aa16.11■□□□□ 0.17
VCPKMT-201ENST00000395859 KCNC3Q14003 757 aa16.11■□□□□ 0.17
VCPKMT-201ENST00000395859 CCDC96Q2M329 555 aa16.11■□□□□ 0.17
VCPKMT-201ENST00000395859 MYSM1Q5VVJ2 828 aa16.11■□□□□ 0.17
VCPKMT-201ENST00000395859 DHX37Q8IY37 1157 aaKnown RBP16.11■□□□□ 0.17
VCPKMT-201ENST00000395859 KBTBD3Q8NAB2 608 aa16.11■□□□□ 0.17
VCPKMT-201ENST00000395859 SYTL5Q8TDW5 730 aaPredicted RBP16.11■□□□□ 0.17
VCPKMT-201ENST00000395859 ATP6V0A1Q93050 837 aa16.11■□□□□ 0.17
VCPKMT-201ENST00000395859 IWS1Q96ST2 819 aa16.11■□□□□ 0.17
VCPKMT-201ENST00000395859 PCDHGC5Q9Y5F6 944 aa16.11■□□□□ 0.17
VCPKMT-201ENST00000395859 DGKIO75912 1065 aa16.1■□□□□ 0.17
VCPKMT-201ENST00000395859 CSPG5O95196 566 aa16.1■□□□□ 0.17
VCPKMT-201ENST00000395859 CTSHP09668 335 aa16.1■□□□□ 0.17
VCPKMT-201ENST00000395859 ADAM17P78536 824 aa16.1■□□□□ 0.17
VCPKMT-201ENST00000395859 RBM10P98175 930 aaKnown RBP16.1■□□□□ 0.17
VCPKMT-201ENST00000395859 STXBP2Q15833 593 aa16.1■□□□□ 0.17
VCPKMT-201ENST00000395859 HSDL1Q3SXM5 330 aa16.1■□□□□ 0.17
VCPKMT-201ENST00000395859 DGLUCYQ7Z3D6 616 aa16.1■□□□□ 0.17
VCPKMT-201ENST00000395859 NSUN6Q8TEA1 469 aaKnown RBP16.1■□□□□ 0.17
VCPKMT-201ENST00000395859 RNPEPQ9H4A4 650 aa16.1■□□□□ 0.17
VCPKMT-201ENST00000395859 EHMT1Q9H9B1 1298 aa16.1■□□□□ 0.17
VCPKMT-201ENST00000395859 MRPL42Q9Y6G3 142 aaKnown RBP16.1■□□□□ 0.17
VCPKMT-201ENST00000395859 C17orf102A2RUQ5 167 aa16.09■□□□□ 0.17
VCPKMT-201ENST00000395859 ENPP3O14638 875 aa16.09■□□□□ 0.17
VCPKMT-201ENST00000395859 FOXP2O15409 715 aa16.09■□□□□ 0.17
VCPKMT-201ENST00000395859 RNF113AO15541 343 aaKnown RBP16.09■□□□□ 0.17
VCPKMT-201ENST00000395859 RAB11FIP3O75154 756 aa16.09■□□□□ 0.17
VCPKMT-201ENST00000395859 BRD1O95696 1058 aa16.09■□□□□ 0.17
VCPKMT-201ENST00000395859 BTG3Q14201 252 aaPredicted RBP16.09■□□□□ 0.17
VCPKMT-201ENST00000395859 ASTLQ6HA08 431 aaPredicted RBP16.09■□□□□ 0.17
VCPKMT-201ENST00000395859 TMEM184AQ6ZMB5 413 aa16.09■□□□□ 0.17
VCPKMT-201ENST00000395859 UBALD2Q8IYN6 164 aa16.09■□□□□ 0.17
VCPKMT-201ENST00000395859 KREMEN2Q8NCW0 462 aa16.09■□□□□ 0.17
VCPKMT-201ENST00000395859 PLXNA4Q9HCM2 1894 aa16.09■□□□□ 0.17
VCPKMT-201ENST00000395859 EIF3JO75822 258 aaKnown RBP16.08■□□□□ 0.16
VCPKMT-201ENST00000395859 CHRNA1P02708 482 aa16.08■□□□□ 0.16
VCPKMT-201ENST00000395859 FGRP09769 529 aa16.08■□□□□ 0.16
VCPKMT-201ENST00000395859 SMIM10L2AP0DMW4 78 aa16.08■□□□□ 0.16
VCPKMT-201ENST00000395859 SMIM10L2BP0DMW5 78 aa16.08■□□□□ 0.16
VCPKMT-201ENST00000395859 SNHG28P0DPA3 235 aa16.08■□□□□ 0.16
VCPKMT-201ENST00000395859 PDHBP11177 359 aa16.08■□□□□ 0.16
VCPKMT-201ENST00000395859 KLHL23Q8NBE8 558 aa16.08■□□□□ 0.16
VCPKMT-201ENST00000395859 POF1BQ8WVV4 589 aa16.08■□□□□ 0.16
VCPKMT-201ENST00000395859 TMEM47Q9BQJ4 181 aa16.08■□□□□ 0.16
VCPKMT-201ENST00000395859 GPCPD1Q9NPB8 672 aa16.08■□□□□ 0.16
VCPKMT-201ENST00000395859 DLL3Q9NYJ7 618 aa16.08■□□□□ 0.16
VCPKMT-201ENST00000395859 MTMR7Q9Y216 660 aa16.08■□□□□ 0.16
VCPKMT-201ENST00000395859 FRMPD2Q68DX3 1309 aaPredicted RBP16.08■□□□□ 0.16
VCPKMT-201ENST00000395859 ATRXP46100 2492 aa16.07■□□□□ 0.16
VCPKMT-201ENST00000395859 TSPY2A6NKD2 308 aa16.07■□□□□ 0.16
VCPKMT-201ENST00000395859 APPP05067 770 aa16.07■□□□□ 0.16
VCPKMT-201ENST00000395859 ARP10275 920 aa16.07■□□□□ 0.16
VCPKMT-201ENST00000395859 CLCN5P51795 746 aa16.07■□□□□ 0.16
VCPKMT-201ENST00000395859 CELF3Q5SZQ8 465 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms