RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 LBHD1Q9BQE6 289 aaPredicted RBP15.27■□□□□ 0.04
HLA-DMA-202ENST00000395303 MXRA8Q9BRK3 442 aa15.27■□□□□ 0.04
HLA-DMA-202ENST00000395303 BCAS3Q9H6U6 928 aa15.27■□□□□ 0.04
HLA-DMA-202ENST00000395303 TMEM39AQ9NV64 488 aa15.27■□□□□ 0.04
HLA-DMA-202ENST00000395303 HAS3O00219 553 aa15.26■□□□□ 0.03
HLA-DMA-202ENST00000395303 CTDNEP1O95476 244 aa15.26■□□□□ 0.03
HLA-DMA-202ENST00000395303 F2P00734 622 aa15.26■□□□□ 0.03
HLA-DMA-202ENST00000395303 KCNA2P16389 499 aa15.26■□□□□ 0.03
HLA-DMA-202ENST00000395303 NIPA1Q7RTP0 329 aa15.26■□□□□ 0.03
HLA-DMA-202ENST00000395303 REXO1Q8N1G1 1221 aaKnown RBP15.26■□□□□ 0.03
HLA-DMA-202ENST00000395303 GIMAP8Q8ND71 665 aaPredicted RBP15.26■□□□□ 0.03
HLA-DMA-202ENST00000395303 BICD2Q8TD16 824 aa15.26■□□□□ 0.03
HLA-DMA-202ENST00000395303 GTF3C6Q969F1 213 aa15.26■□□□□ 0.03
HLA-DMA-202ENST00000395303 SPATA33Q96N06 139 aa15.26■□□□□ 0.03
HLA-DMA-202ENST00000395303 C22orf23Q9BZE7 217 aa15.26■□□□□ 0.03
HLA-DMA-202ENST00000395303 MLXIPQ9HAP2 919 aa15.26■□□□□ 0.03
HLA-DMA-202ENST00000395303 PRDM5Q9NQX1 630 aaPredicted RBP15.26■□□□□ 0.03
HLA-DMA-202ENST00000395303 VPS54Q9P1Q0 977 aa15.26■□□□□ 0.03
HLA-DMA-202ENST00000395303 EYSQ5T1H1 3165 aa15.25■□□□□ 0.03
HLA-DMA-202ENST00000395303 M0R2N6 131 aa15.25■□□□□ 0.03
HLA-DMA-202ENST00000395303 B4GALT4O60513 344 aa15.25■□□□□ 0.03
HLA-DMA-202ENST00000395303 ATP9AO75110 1047 aa15.25■□□□□ 0.03
HLA-DMA-202ENST00000395303 TIMP1P01033 207 aa15.25■□□□□ 0.03
HLA-DMA-202ENST00000395303 ARHGAP4P98171 946 aa15.25■□□□□ 0.03
HLA-DMA-202ENST00000395303 NPY5RQ15761 445 aa15.25■□□□□ 0.03
HLA-DMA-202ENST00000395303 JAKMIP3Q5VZ66 844 aa15.25■□□□□ 0.03
HLA-DMA-202ENST00000395303 GALNT17Q6IS24 598 aa15.25■□□□□ 0.03
HLA-DMA-202ENST00000395303 DAGLBQ8NCG7 672 aa15.25■□□□□ 0.03
HLA-DMA-202ENST00000395303 BADQ92934 168 aa15.25■□□□□ 0.03
HLA-DMA-202ENST00000395303 C16orf70Q9BSU1 422 aa15.25■□□□□ 0.03
HLA-DMA-202ENST00000395303 KATNAL1Q9BW62 490 aa15.25■□□□□ 0.03
HLA-DMA-202ENST00000395303 EVPLQ92817 2033 aa15.24■□□□□ 0.03
HLA-DMA-202ENST00000395303 NFASCO94856 1347 aa15.24■□□□□ 0.03
HLA-DMA-202ENST00000395303 MEIS1O00470 390 aa15.24■□□□□ 0.03
HLA-DMA-202ENST00000395303 RAG1P15918 1043 aa15.24■□□□□ 0.03
HLA-DMA-202ENST00000395303 CIITAP33076 1130 aa15.24■□□□□ 0.03
HLA-DMA-202ENST00000395303 MTMR1Q13613 665 aa15.24■□□□□ 0.03
HLA-DMA-202ENST00000395303 CEP55Q53EZ4 464 aa15.24■□□□□ 0.03
HLA-DMA-202ENST00000395303 CYFIP1Q7L576 1253 aa15.24■□□□□ 0.03
HLA-DMA-202ENST00000395303 IL27Q8NEV9 243 aa15.24■□□□□ 0.03
HLA-DMA-202ENST00000395303 AIFM3Q96NN9 605 aa15.24■□□□□ 0.03
HLA-DMA-202ENST00000395303 GPR20Q99678 358 aa15.24■□□□□ 0.03
HLA-DMA-202ENST00000395303 KCNH7Q9NS40 1196 aa15.24■□□□□ 0.03
HLA-DMA-202ENST00000395303 PCDHA4Q9UN74 947 aa15.24■□□□□ 0.03
HLA-DMA-202ENST00000395303 IGLV3-22A0A075B6J6 115 aa15.23■□□□□ 0.03
HLA-DMA-202ENST00000395303 EDIL3O43854 480 aa15.23■□□□□ 0.03
HLA-DMA-202ENST00000395303 SUPT20HL2P0C7V6 817 aa15.23■□□□□ 0.03
HLA-DMA-202ENST00000395303 FDPSP14324 419 aaKnown RBP15.23■□□□□ 0.03
HLA-DMA-202ENST00000395303 PSEN2P49810 448 aa15.23■□□□□ 0.03
HLA-DMA-202ENST00000395303 NLRP5P59047 1200 aa15.23■□□□□ 0.03
HLA-DMA-202ENST00000395303 ST3GAL1Q11201 340 aa15.23■□□□□ 0.03
HLA-DMA-202ENST00000395303 MFSD10Q14728 455 aa15.23■□□□□ 0.03
HLA-DMA-202ENST00000395303 SHHQ15465 462 aa15.23■□□□□ 0.03
HLA-DMA-202ENST00000395303 C9orf50Q5SZB4 431 aa15.23■□□□□ 0.03
HLA-DMA-202ENST00000395303 NECAB1Q8N987 351 aa15.23■□□□□ 0.03
HLA-DMA-202ENST00000395303 NSUN7Q8NE18 718 aaKnown RBP15.23■□□□□ 0.03
HLA-DMA-202ENST00000395303 CYP2W1Q8TAV3 490 aa15.23■□□□□ 0.03
HLA-DMA-202ENST00000395303 PHF20Q9BVI0 1012 aa15.23■□□□□ 0.03
HLA-DMA-202ENST00000395303 TRPV6Q9H1D0 765 aa15.23■□□□□ 0.03
HLA-DMA-202ENST00000395303 LIMCH1Q9UPQ0 1083 aa15.23■□□□□ 0.03
HLA-DMA-202ENST00000395303 LOXHD1Q8IVV2 1947 aa15.23■□□□□ 0.03
HLA-DMA-202ENST00000395303 PRUNE2Q8WUY3 3088 aa15.22■□□□□ 0.03
HLA-DMA-202ENST00000395303 SORBS3O60504 671 aa15.22■□□□□ 0.03
HLA-DMA-202ENST00000395303 LGALS2P05162 132 aa15.22■□□□□ 0.03
HLA-DMA-202ENST00000395303 ZNF286BP0CG31 522 aa15.22■□□□□ 0.03
HLA-DMA-202ENST00000395303 HOXC8P31273 242 aa15.22■□□□□ 0.03
HLA-DMA-202ENST00000395303 KIAA0753Q2KHM9 967 aa15.22■□□□□ 0.03
HLA-DMA-202ENST00000395303 MFSD5Q6N075 450 aa15.22■□□□□ 0.03
HLA-DMA-202ENST00000395303 BLIDQ8IZY5 108 aa15.22■□□□□ 0.03
HLA-DMA-202ENST00000395303 RASGRP4Q8TDF6 673 aa15.22■□□□□ 0.03
HLA-DMA-202ENST00000395303 CTAGE1Q96RT6 745 aa15.22■□□□□ 0.03
HLA-DMA-202ENST00000395303 NOC4LQ9BVI4 516 aaKnown RBP15.22■□□□□ 0.03
HLA-DMA-202ENST00000395303 TRMT13Q9NUP7 481 aaKnown RBP15.22■□□□□ 0.03
HLA-DMA-202ENST00000395303 ORC3Q9UBD5 711 aaPredicted RBP15.22■□□□□ 0.03
HLA-DMA-202ENST00000395303 GTF2IRD1Q9UHL9 959 aa15.22■□□□□ 0.03
HLA-DMA-202ENST00000395303 GSTTP1A0A1W2PQM5 241 aa15.21■□□□□ 0.03
HLA-DMA-202ENST00000395303 FAM86B1E9PN63 330 aa15.21■□□□□ 0.03
HLA-DMA-202ENST00000395303 NOP56O00567 594 aaKnown RBP15.21■□□□□ 0.03
HLA-DMA-202ENST00000395303 FAM86B2P0C5J1 330 aa15.21■□□□□ 0.03
HLA-DMA-202ENST00000395303 ARP10275 920 aa15.21■□□□□ 0.03
HLA-DMA-202ENST00000395303 USP11P51784 963 aa15.21■□□□□ 0.03
HLA-DMA-202ENST00000395303 RABEP1Q15276 862 aa15.21■□□□□ 0.03
HLA-DMA-202ENST00000395303 FAM47CQ5HY64 1035 aa15.21■□□□□ 0.03
HLA-DMA-202ENST00000395303 WASF1Q92558 559 aa15.21■□□□□ 0.03
HLA-DMA-202ENST00000395303 ZSCAN31Q96LW9 406 aaPredicted RBP15.21■□□□□ 0.03
HLA-DMA-202ENST00000395303 FAM161BQ96MY7 647 aa15.21■□□□□ 0.03
HLA-DMA-202ENST00000395303 AGO4Q9HCK5 861 aaKnown RBP15.21■□□□□ 0.03
HLA-DMA-202ENST00000395303 TELO2Q9Y4R8 837 aa15.21■□□□□ 0.03
HLA-DMA-202ENST00000395303 GBF1Q92538 1859 aa15.2■□□□□ 0.02
HLA-DMA-202ENST00000395303 MYO9BQ13459 2157 aa15.2■□□□□ 0.02
HLA-DMA-202ENST00000395303 H3BRB1 525 aa15.2■□□□□ 0.02
HLA-DMA-202ENST00000395303 XBP1P17861 261 aa15.2■□□□□ 0.02
HLA-DMA-202ENST00000395303 SETQ01105 290 aaPredicted RBP15.2■□□□□ 0.02
HLA-DMA-202ENST00000395303 RBL2Q08999 1139 aa15.2■□□□□ 0.02
HLA-DMA-202ENST00000395303 ITGB3BPQ13352 177 aaPredicted RBP15.2■□□□□ 0.02
HLA-DMA-202ENST00000395303 ZNF697Q5TEC3 545 aa15.2■□□□□ 0.02
HLA-DMA-202ENST00000395303 GDF6Q6KF10 455 aaPredicted RBP15.2■□□□□ 0.02
HLA-DMA-202ENST00000395303 PLA2G4DQ86XP0 818 aa15.2■□□□□ 0.02
HLA-DMA-202ENST00000395303 SEPT1Q8WYJ6 367 aa15.2■□□□□ 0.02
HLA-DMA-202ENST00000395303 TBC1D32Q96NH3 1257 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms