RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 SUSD4Q5VX71 490 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 NLRP10Q86W26 655 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 PARP9Q8IXQ6 854 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 ZCWPW1Q9H0M4 648 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 KIF9Q9HAQ2 790 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 GEMIN8Q9NWZ8 242 aaKnown RBP9.66□□□□□ -0.86
RTN4-206ENST00000394611 TCEAL9Q9UHQ7 104 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 SCN7AQ01118 1682 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 MEIS1O00470 390 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 SMIM24O75264 130 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 ZBTB7AO95365 584 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 EVX2Q03828 476 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 STK4Q13043 487 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 ASIC2Q16515 512 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 ZNF658Q5TYW1 1059 aaPredicted RBP9.66□□□□□ -0.86
RTN4-206ENST00000394611 ANKRD40Q6AI12 368 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 CLEC4GQ6UXB4 293 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 ISLR2Q6UXK2 745 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 MAPKAPK5Q8IW41 473 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 FERMT2Q96AC1 680 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 ZSCAN10Q96SZ4 725 aaPredicted RBP9.66□□□□□ -0.86
RTN4-206ENST00000394611 INTS9Q9NV88 658 aaKnown RBP9.66□□□□□ -0.86
RTN4-206ENST00000394611 PNMA2Q9UL42 364 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 UTP11Q9Y3A2 253 aaKnown RBP9.66□□□□□ -0.86
RTN4-206ENST00000394611 USP17L3A6NCW0 530 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 USP17L4A6NCW7 530 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 CLIC2O15247 247 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 LACTBP83111 547 aaPredicted RBP9.66□□□□□ -0.86
RTN4-206ENST00000394611 ZBTB16Q05516 673 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 USP17L1Q7RTZ2 530 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 CCDC105Q8IYK2 499 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 TMTC2Q8N394 836 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 STRBPQ96SI9 672 aaKnown RBP9.66□□□□□ -0.86
RTN4-206ENST00000394611 MAP3K14Q99558 947 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 TSGA10Q9BZW7 698 aa9.66□□□□□ -0.86
RTN4-206ENST00000394611 PPP1R3GB7ZBB8 358 aa9.65□□□□□ -0.86
RTN4-206ENST00000394611 UQCRFS1P1P0C7P4 283 aa9.65□□□□□ -0.86
RTN4-206ENST00000394611 TUBB2AQ13885 445 aa9.65□□□□□ -0.86
RTN4-206ENST00000394611 KRT79Q5XKE5 535 aa9.65□□□□□ -0.86
RTN4-206ENST00000394611 AP1ARQ63HQ0 302 aa9.65□□□□□ -0.86
RTN4-206ENST00000394611 BLIDQ8IZY5 108 aa9.65□□□□□ -0.86
RTN4-206ENST00000394611 MSANTD4Q8NCY6 345 aa9.65□□□□□ -0.86
RTN4-206ENST00000394611 SETDB2Q96T68 719 aa9.65□□□□□ -0.86
RTN4-206ENST00000394611 TUBB2BQ9BVA1 445 aa9.65□□□□□ -0.86
RTN4-206ENST00000394611 PACSIN1Q9BY11 444 aa9.65□□□□□ -0.86
RTN4-206ENST00000394611 FOXP1Q9H334 677 aaPredicted RBP9.65□□□□□ -0.86
RTN4-206ENST00000394611 PSD3Q9NYI0 1048 aa9.65□□□□□ -0.86
RTN4-206ENST00000394611 ASIC3Q9UHC3 531 aa9.65□□□□□ -0.86
RTN4-206ENST00000394611 SFI1A8K8P3 1242 aa9.65□□□□□ -0.86
RTN4-206ENST00000394611 MMEP08473 750 aa9.65□□□□□ -0.86
RTN4-206ENST00000394611 SCG2P13521 617 aa9.65□□□□□ -0.86
RTN4-206ENST00000394611 RBM5P52756 815 aaKnown RBP eCLIP9.65□□□□□ -0.86
RTN4-206ENST00000394611 MXRA7P84157 204 aa9.65□□□□□ -0.86
RTN4-206ENST00000394611 TTMPQ5BVD1 217 aa9.65□□□□□ -0.86
RTN4-206ENST00000394611 NUGGCQ68CJ6 796 aa9.65□□□□□ -0.86
RTN4-206ENST00000394611 INTS8Q75QN2 995 aaKnown RBP9.65□□□□□ -0.86
RTN4-206ENST00000394611 KCNB2Q92953 911 aa9.65□□□□□ -0.86
RTN4-206ENST00000394611 P2RX5Q93086 422 aa9.65□□□□□ -0.86
RTN4-206ENST00000394611 SNX12Q9UMY4 172 aa9.65□□□□□ -0.86
RTN4-206ENST00000394611 HPSEQ9Y251 543 aa9.65□□□□□ -0.86
RTN4-206ENST00000394611 ANKRD36CQ5JPF3 1778 aa9.65□□□□□ -0.87
RTN4-206ENST00000394611 WTIPA6NIX2 430 aaPredicted RBP9.65□□□□□ -0.87
RTN4-206ENST00000394611 LGALS16A8MUM7 142 aa9.65□□□□□ -0.87
RTN4-206ENST00000394611 EVI5O60447 810 aa9.65□□□□□ -0.87
RTN4-206ENST00000394611 DENND2CQ68D51 928 aa9.65□□□□□ -0.87
RTN4-206ENST00000394611 LONP2Q86WA8 852 aa9.65□□□□□ -0.87
RTN4-206ENST00000394611 STAMBPL1Q96FJ0 436 aa9.65□□□□□ -0.87
RTN4-206ENST00000394611 MED15Q96RN5 788 aa9.65□□□□□ -0.87
RTN4-206ENST00000394611 FAM118BQ9BPY3 351 aa9.65□□□□□ -0.87
RTN4-206ENST00000394611 NDST4Q9H3R1 872 aa9.65□□□□□ -0.87
RTN4-206ENST00000394611 RWDD2AQ9UIY3 292 aa9.65□□□□□ -0.87
RTN4-206ENST00000394611 ATF5Q9Y2D1 282 aaPredicted RBP9.65□□□□□ -0.87
RTN4-206ENST00000394611 XDHP47989 1333 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 ACTN1P12814 892 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 ZNF18P17022 549 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 RFX5P48382 616 aaPredicted RBP9.64□□□□□ -0.87
RTN4-206ENST00000394611 PLCB3Q01970 1234 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 SMAD1Q15797 465 aaKnown RBP9.64□□□□□ -0.87
RTN4-206ENST00000394611 CYP4F22Q6NT55 531 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 CCDC197Q8NCU1 140 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 NSMCE1Q8WV22 266 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 PRCCQ92733 491 aaPredicted RBP9.64□□□□□ -0.87
RTN4-206ENST00000394611 CYFIP2Q96F07 1278 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 GPR101Q96P66 508 aaPredicted RBP9.64□□□□□ -0.87
RTN4-206ENST00000394611 EPB41L4AQ9HCS5 686 aaPredicted RBP9.64□□□□□ -0.87
RTN4-206ENST00000394611 IRAK4Q9NWZ3 460 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 PXDNLA1KZ92 1463 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 RAD51CO43502 376 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 ZBED6P86452 979 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 FOXO4P98177 505 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 DDR1Q08345 913 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 TNIP1Q15025 636 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 TAF11Q15544 211 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 TMCO4Q5TGY1 634 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 RUFY4Q6ZNE9 571 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 SYCP3Q8IZU3 236 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 MYCBPAPQ8TBZ2 947 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 IGDCC4Q8TDY8 1250 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 LRRC45Q96CN5 670 aa9.64□□□□□ -0.87
RTN4-206ENST00000394611 DDX23Q9BUQ8 820 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms