RNA–Protein interactions for RNA: ENST00000394055.7

CDH16-202, Transcript of cadherin 16, humanhuman

TSL 1 (best) BASIC

Gene CDH16, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-202ENST00000394055 POLD4Q9HCU8 107 aa16.29■□□□□ 0.2
CDH16-202ENST00000394055 ST7Q9NRC1 585 aa16.29■□□□□ 0.2
CDH16-202ENST00000394055 SIK3Q9Y2K2 1263 aa16.29■□□□□ 0.2
CDH16-202ENST00000394055 SPDYE2BA6NHP3 402 aa16.28■□□□□ 0.2
CDH16-202ENST00000394055 PSMD14O00487 310 aa16.28■□□□□ 0.2
CDH16-202ENST00000394055 FGFR1OPO95684 399 aaKnown RBP16.28■□□□□ 0.2
CDH16-202ENST00000394055 SPDYE6P0CI01 402 aa16.28■□□□□ 0.2
CDH16-202ENST00000394055 CYLC1P35663 651 aaPredicted RBP16.28■□□□□ 0.2
CDH16-202ENST00000394055 SPIRE1Q08AE8 756 aa16.28■□□□□ 0.2
CDH16-202ENST00000394055 CCDC174Q6PII3 467 aa16.28■□□□□ 0.2
CDH16-202ENST00000394055 KRT26Q7Z3Y9 468 aa16.28■□□□□ 0.2
CDH16-202ENST00000394055 CCDC65Q8IXS2 484 aa16.28■□□□□ 0.2
CDH16-202ENST00000394055 KRT222Q8N1A0 295 aa16.28■□□□□ 0.2
CDH16-202ENST00000394055 GPR161Q8N6U8 529 aaKnown RBP16.28■□□□□ 0.2
CDH16-202ENST00000394055 TBC1D5Q92609 795 aa16.28■□□□□ 0.2
CDH16-202ENST00000394055 MBOAT7Q96N66 472 aa16.28■□□□□ 0.2
CDH16-202ENST00000394055 STK32BQ9NY57 414 aa16.28■□□□□ 0.2
CDH16-202ENST00000394055 ZNF76P36508 570 aa16.28■□□□□ 0.2
CDH16-202ENST00000394055 CCDC40Q4G0X9 1142 aa16.28■□□□□ 0.2
CDH16-202ENST00000394055 ARSHQ5FYA8 562 aa16.28■□□□□ 0.2
CDH16-202ENST00000394055 FAM83BQ5T0W9 1011 aa16.28■□□□□ 0.2
CDH16-202ENST00000394055 LARGE2Q8N3Y3 721 aa16.28■□□□□ 0.2
CDH16-202ENST00000394055 SUPT20HQ8NEM7 779 aa16.28■□□□□ 0.2
CDH16-202ENST00000394055 JAKMIP2Q96AA8 810 aa16.28■□□□□ 0.2
CDH16-202ENST00000394055 HDAC6Q9UBN7 1215 aa16.28■□□□□ 0.2
CDH16-202ENST00000394055 SCAF8Q9UPN6 1271 aaKnown RBP16.28■□□□□ 0.2
CDH16-202ENST00000394055 FHOD1Q9Y613 1164 aa16.28■□□□□ 0.2
CDH16-202ENST00000394055 DUSP10Q9Y6W6 482 aa16.28■□□□□ 0.2
CDH16-202ENST00000394055 UBXN2AP68543 259 aa16.27■□□□□ 0.2
CDH16-202ENST00000394055 RSBN1LQ6PCB5 846 aaPredicted RBP16.27■□□□□ 0.2
CDH16-202ENST00000394055 MIGA2Q7L4E1 593 aa16.27■□□□□ 0.2
CDH16-202ENST00000394055 RABGGTAQ92696 567 aa16.27■□□□□ 0.2
CDH16-202ENST00000394055 HAUS4Q9H6D7 363 aa16.27■□□□□ 0.2
CDH16-202ENST00000394055 IPO7O95373 1038 aaKnown RBP16.27■□□□□ 0.2
CDH16-202ENST00000394055 CFBP00751 764 aa16.27■□□□□ 0.2
CDH16-202ENST00000394055 PNMA6AP0CW24 399 aaPredicted RBP16.27■□□□□ 0.2
CDH16-202ENST00000394055 SREBF1P36956 1147 aa16.27■□□□□ 0.2
CDH16-202ENST00000394055 KRT83P78385 493 aa16.27■□□□□ 0.2
CDH16-202ENST00000394055 DLGAP5Q15398 846 aa16.27■□□□□ 0.2
CDH16-202ENST00000394055 ZCWPW2Q504Y3 356 aa16.27■□□□□ 0.2
CDH16-202ENST00000394055 CCDC84Q86UT8 332 aaPredicted RBP16.27■□□□□ 0.2
CDH16-202ENST00000394055 ZNF70Q9UC06 446 aaPredicted RBP16.27■□□□□ 0.2
CDH16-202ENST00000394055 MSH4O15457 936 aa16.27■□□□□ 0.19
CDH16-202ENST00000394055 STAT2P52630 851 aa16.27■□□□□ 0.19
CDH16-202ENST00000394055 SLC12A3P55017 1021 aa16.27■□□□□ 0.19
CDH16-202ENST00000394055 BMS1Q14692 1282 aaKnown RBP16.27■□□□□ 0.19
CDH16-202ENST00000394055 HAUS3Q68CZ6 603 aa16.27■□□□□ 0.19
CDH16-202ENST00000394055 RRAGAQ7L523 313 aa16.27■□□□□ 0.19
CDH16-202ENST00000394055 CEP112Q8N8E3 955 aa16.27■□□□□ 0.19
CDH16-202ENST00000394055 SCFD1Q8WVM8 642 aa16.27■□□□□ 0.19
CDH16-202ENST00000394055 CCDC42Q96M95 316 aa16.27■□□□□ 0.19
CDH16-202ENST00000394055 TNS1Q9HBL0 1735 aaKnown RBP16.27■□□□□ 0.19
CDH16-202ENST00000394055 MYO1AQ9UBC5 1043 aa16.27■□□□□ 0.19
CDH16-202ENST00000394055 MACROD2A1Z1Q3 448 aa16.26■□□□□ 0.19
CDH16-202ENST00000394055 CASP5P51878 434 aa16.26■□□□□ 0.19
CDH16-202ENST00000394055 FKBP3Q00688 224 aaKnown RBP16.26■□□□□ 0.19
CDH16-202ENST00000394055 FIGNQ5HY92 759 aa16.26■□□□□ 0.19
CDH16-202ENST00000394055 TMEM39BQ9GZU3 492 aa16.26■□□□□ 0.19
CDH16-202ENST00000394055 ARHGEF10LQ9HCE6 1279 aa16.26■□□□□ 0.19
CDH16-202ENST00000394055 PCDHA2Q9Y5H9 948 aa16.26■□□□□ 0.19
CDH16-202ENST00000394055 COL4A3BPQ9Y5P4 624 aa16.26■□□□□ 0.19
CDH16-202ENST00000394055 A0A1W2PQJ5 194 aa16.26■□□□□ 0.19
CDH16-202ENST00000394055 LRRC53A6NM62 1247 aa16.26■□□□□ 0.19
CDH16-202ENST00000394055 ZNF263O14978 683 aa16.26■□□□□ 0.19
CDH16-202ENST00000394055 SPATA31C1P0DKV0 1188 aa16.26■□□□□ 0.19
CDH16-202ENST00000394055 MOXD1Q6UVY6 613 aa16.26■□□□□ 0.19
CDH16-202ENST00000394055 CRACR2AQ9BSW2 395 aa16.26■□□□□ 0.19
CDH16-202ENST00000394055 BCAS3Q9H6U6 928 aa16.26■□□□□ 0.19
CDH16-202ENST00000394055 ARHGAP20Q9P2F6 1191 aa16.26■□□□□ 0.19
CDH16-202ENST00000394055 HERC5Q9UII4 1024 aaKnown RBP16.26■□□□□ 0.19
CDH16-202ENST00000394055 MYO6Q9UM54 1294 aa16.26■□□□□ 0.19
CDH16-202ENST00000394055 SRGAP2O75044 1071 aa16.25■□□□□ 0.19
CDH16-202ENST00000394055 ZRANB2O95218 330 aaKnown RBP eCLIP16.25■□□□□ 0.19
CDH16-202ENST00000394055 FOSP01100 380 aaPredicted RBP16.25■□□□□ 0.19
CDH16-202ENST00000394055 ATP1A1P05023 1023 aaKnown RBP16.25■□□□□ 0.19
CDH16-202ENST00000394055 APBA1Q02410 837 aa16.25■□□□□ 0.19
CDH16-202ENST00000394055 Q4G0T1 1027 aa16.25■□□□□ 0.19
CDH16-202ENST00000394055 BTNL9Q6UXG8 535 aa16.25■□□□□ 0.19
CDH16-202ENST00000394055 OGFOD1Q8N543 542 aa16.25■□□□□ 0.19
CDH16-202ENST00000394055 NLRC4Q9NPP4 1024 aa16.25■□□□□ 0.19
CDH16-202ENST00000394055 EMILIN3Q9NT22 766 aa16.25■□□□□ 0.19
CDH16-202ENST00000394055 RGL1Q9NZL6 768 aa16.25■□□□□ 0.19
CDH16-202ENST00000394055 ZBTB21Q9ULJ3 1066 aa16.25■□□□□ 0.19
CDH16-202ENST00000394055 EIF3CLB5ME19 914 aaKnown RBP16.25■□□□□ 0.19
CDH16-202ENST00000394055 RHOXF2BP0C7M4 288 aa16.25■□□□□ 0.19
CDH16-202ENST00000394055 AMPD2Q01433 879 aa16.25■□□□□ 0.19
CDH16-202ENST00000394055 CC2D1AQ6P1N0 951 aaPredicted RBP16.25■□□□□ 0.19
CDH16-202ENST00000394055 TTLL6Q8N841 843 aa16.25■□□□□ 0.19
CDH16-202ENST00000394055 ERMNQ8TAM6 284 aa16.25■□□□□ 0.19
CDH16-202ENST00000394055 EIF3CQ99613 913 aaKnown RBP16.25■□□□□ 0.19
CDH16-202ENST00000394055 RHOXF2Q9BQY4 288 aa16.25■□□□□ 0.19
CDH16-202ENST00000394055 FAM53CQ9NYF3 392 aa16.25■□□□□ 0.19
CDH16-202ENST00000394055 DNM3Q9UQ16 869 aa16.25■□□□□ 0.19
CDH16-202ENST00000394055 CHMP2AO43633 222 aa16.24■□□□□ 0.19
CDH16-202ENST00000394055 KRT86O43790 486 aa16.24■□□□□ 0.19
CDH16-202ENST00000394055 CCDC170Q8IYT3 715 aa16.24■□□□□ 0.19
CDH16-202ENST00000394055 REEP2Q9BRK0 252 aa16.24■□□□□ 0.19
CDH16-202ENST00000394055 GLIS2Q9BZE0 524 aaPredicted RBP16.24■□□□□ 0.19
CDH16-202ENST00000394055 PLAGL2Q9UPG8 496 aa16.24■□□□□ 0.19
CDH16-202ENST00000394055 COL4A5P29400 1685 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms