RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 PCNX4Q63HM2 1172 aa24.73■■□□□ 1.55
HMGA2-203ENST00000393578 GPBP1Q86WP2 473 aa24.73■■□□□ 1.55
HMGA2-203ENST00000393578 IRF2BP1Q8IU81 584 aa24.73■■□□□ 1.55
HMGA2-203ENST00000393578 GUF1Q8N442 669 aaKnown RBP24.73■■□□□ 1.55
HMGA2-203ENST00000393578 L3MBTL3Q96JM7 780 aaPredicted RBP24.73■■□□□ 1.55
HMGA2-203ENST00000393578 SNCAIPQ9Y6H5 919 aa24.73■■□□□ 1.55
HMGA2-203ENST00000393578 ADM5C9JUS6 153 aa24.73■■□□□ 1.55
HMGA2-203ENST00000393578 TEX33O43247 280 aa24.73■■□□□ 1.55
HMGA2-203ENST00000393578 ARP10275 920 aa24.73■■□□□ 1.55
HMGA2-203ENST00000393578 CYP11B2P19099 503 aa24.73■■□□□ 1.55
HMGA2-203ENST00000393578 EEF1GP26641 437 aaKnown RBP24.73■■□□□ 1.55
HMGA2-203ENST00000393578 RPS6P62753 249 aaKnown RBP24.73■■□□□ 1.55
HMGA2-203ENST00000393578 DUSP9Q99956 384 aaKnown RBP24.73■■□□□ 1.55
HMGA2-203ENST00000393578 HSD17B14Q9BPX1 270 aa24.73■■□□□ 1.55
HMGA2-203ENST00000393578 SRRTQ9BXP5 876 aaKnown RBP24.73■■□□□ 1.55
HMGA2-203ENST00000393578 PANK4Q9NVE7 773 aa24.73■■□□□ 1.55
HMGA2-203ENST00000393578 IPO5O00410 1097 aaKnown RBP24.72■■□□□ 1.55
HMGA2-203ENST00000393578 ITGB5P18084 799 aa24.72■■□□□ 1.55
HMGA2-203ENST00000393578 COASYQ13057 564 aa24.72■■□□□ 1.55
HMGA2-203ENST00000393578 PTPN21Q16825 1174 aa24.72■■□□□ 1.55
HMGA2-203ENST00000393578 ANKRD40Q6AI12 368 aa24.72■■□□□ 1.55
HMGA2-203ENST00000393578 CENPPQ6IPU0 288 aa24.72■■□□□ 1.55
HMGA2-203ENST00000393578 CCDC65Q8IXS2 484 aa24.72■■□□□ 1.55
HMGA2-203ENST00000393578 CSGALNACT2Q8N6G5 542 aa24.72■■□□□ 1.55
HMGA2-203ENST00000393578 SYT2Q8N9I0 419 aaPredicted RBP24.72■■□□□ 1.55
HMGA2-203ENST00000393578 RIT2Q99578 217 aa24.72■■□□□ 1.55
HMGA2-203ENST00000393578 TUFT1Q9NNX1 390 aa24.72■■□□□ 1.55
HMGA2-203ENST00000393578 PBX1P40424 430 aa24.71■■□□□ 1.55
HMGA2-203ENST00000393578 COPB1P53618 953 aaKnown RBP24.71■■□□□ 1.55
HMGA2-203ENST00000393578 RNF207Q6ZRF8 634 aa24.71■■□□□ 1.55
HMGA2-203ENST00000393578 CCDC112Q8NEF3 446 aa24.71■■□□□ 1.55
HMGA2-203ENST00000393578 HOXC10Q9NYD6 342 aa24.71■■□□□ 1.55
HMGA2-203ENST00000393578 CSADQ9Y600 493 aa24.71■■□□□ 1.55
HMGA2-203ENST00000393578 MYPNQ86TC9 1320 aa24.71■■□□□ 1.55
HMGA2-203ENST00000393578 ATP2A1O14983 1001 aa24.71■■□□□ 1.55
HMGA2-203ENST00000393578 N4BP3O15049 544 aa24.71■■□□□ 1.55
HMGA2-203ENST00000393578 PSMC6P62333 389 aa24.71■■□□□ 1.55
HMGA2-203ENST00000393578 CYP4A11Q02928 519 aa24.71■■□□□ 1.55
HMGA2-203ENST00000393578 DLK2Q6UY11 383 aa24.71■■□□□ 1.55
HMGA2-203ENST00000393578 USP50Q70EL3 339 aaPredicted RBP24.71■■□□□ 1.55
HMGA2-203ENST00000393578 RNF146Q9NTX7 359 aa24.71■■□□□ 1.55
HMGA2-203ENST00000393578 ZNF214Q9UL59 606 aaPredicted RBP24.71■■□□□ 1.55
HMGA2-203ENST00000393578 MUTP22033 750 aa24.7■■□□□ 1.54
HMGA2-203ENST00000393578 ARSHQ5FYA8 562 aa24.7■■□□□ 1.54
HMGA2-203ENST00000393578 IL31RAQ8NI17 732 aa24.7■■□□□ 1.54
HMGA2-203ENST00000393578 ZFP91Q96JP5 570 aaPredicted RBP24.7■■□□□ 1.54
HMGA2-203ENST00000393578 TEKT3Q9BXF9 490 aa24.7■■□□□ 1.54
HMGA2-203ENST00000393578 RIPK3Q9Y572 518 aa24.7■■□□□ 1.54
HMGA2-203ENST00000393578 UBIAD1Q9Y5Z9 338 aa24.7■■□□□ 1.54
HMGA2-203ENST00000393578 PABPC4Q13310 644 aaKnown RBP eCLIP24.69■■□□□ 1.54
HMGA2-203ENST00000393578 SNRNP48Q6IEG0 339 aaKnown RBP24.69■■□□□ 1.54
HMGA2-203ENST00000393578 FOXR2Q6PJQ5 311 aa24.69■■□□□ 1.54
HMGA2-203ENST00000393578 B3GNT9Q6UX72 402 aa24.69■■□□□ 1.54
HMGA2-203ENST00000393578 SLC30A10Q6XR72 485 aa24.69■■□□□ 1.54
HMGA2-203ENST00000393578 ZC3H15Q8WU90 426 aaKnown RBP24.69■■□□□ 1.54
HMGA2-203ENST00000393578 TAAR1Q96RJ0 339 aa24.69■■□□□ 1.54
HMGA2-203ENST00000393578 PAPPA2Q9BXP8 1791 aa24.69■■□□□ 1.54
HMGA2-203ENST00000393578 SEMA6BQ9H3T3 888 aa24.69■■□□□ 1.54
HMGA2-203ENST00000393578 KCNH7Q9NS40 1196 aa24.69■■□□□ 1.54
HMGA2-203ENST00000393578 RGL1Q9NZL6 768 aa24.69■■□□□ 1.54
HMGA2-203ENST00000393578 MAGEC2Q9UBF1 373 aaPredicted RBP24.69■■□□□ 1.54
HMGA2-203ENST00000393578 COL11A1P12107 1806 aaPredicted RBP24.69■■□□□ 1.54
HMGA2-203ENST00000393578 FRMD3A2A2Y4 597 aa24.69■■□□□ 1.54
HMGA2-203ENST00000393578 EYA4O95677 639 aa24.69■■□□□ 1.54
HMGA2-203ENST00000393578 KCNJ6P48051 423 aa24.69■■□□□ 1.54
HMGA2-203ENST00000393578 IREB2P48200 963 aaKnown RBP24.69■■□□□ 1.54
HMGA2-203ENST00000393578 FAM26FQ5R3K3 315 aa24.69■■□□□ 1.54
HMGA2-203ENST00000393578 FAM114A1Q8IWE2 563 aa24.69■■□□□ 1.54
HMGA2-203ENST00000393578 TMX1Q9H3N1 280 aa24.69■■□□□ 1.54
HMGA2-203ENST00000393578 TAB2Q9NYJ8 693 aa24.69■■□□□ 1.54
HMGA2-203ENST00000393578 ITIH6Q6UXX5 1313 aa24.68■■□□□ 1.54
HMGA2-203ENST00000393578 CHMP2AO43633 222 aa24.68■■□□□ 1.54
HMGA2-203ENST00000393578 SLITRK3O94933 977 aa24.68■■□□□ 1.54
HMGA2-203ENST00000393578 KRT18P05783 430 aaKnown RBP24.68■■□□□ 1.54
HMGA2-203ENST00000393578 MRPS9P82933 396 aaKnown RBP24.68■■□□□ 1.54
HMGA2-203ENST00000393578 TMEM132BQ14DG7 1078 aa24.68■■□□□ 1.54
HMGA2-203ENST00000393578 PGM5Q15124 567 aa24.68■■□□□ 1.54
HMGA2-203ENST00000393578 TKFCQ3LXA3 575 aa24.68■■□□□ 1.54
HMGA2-203ENST00000393578 NSMFQ6X4W1 530 aa24.68■■□□□ 1.54
HMGA2-203ENST00000393578 CREBRFQ8IUR6 639 aa24.68■■□□□ 1.54
HMGA2-203ENST00000393578 RMDN3Q96TC7 470 aa24.68■■□□□ 1.54
HMGA2-203ENST00000393578 VPS16Q9H269 839 aa24.68■■□□□ 1.54
HMGA2-203ENST00000393578 JADE2Q9NQC1 790 aa24.68■■□□□ 1.54
HMGA2-203ENST00000393578 KCND1Q9NSA2 647 aa24.68■■□□□ 1.54
HMGA2-203ENST00000393578 WDR90Q96KV7 1748 aa24.68■■□□□ 1.54
HMGA2-203ENST00000393578 LRRC63Q05C16 580 aa24.67■■□□□ 1.54
HMGA2-203ENST00000393578 DNTTIP2Q5QJE6 756 aaKnown RBP24.67■■□□□ 1.54
HMGA2-203ENST00000393578 MYOCDQ8IZQ8 938 aa24.67■■□□□ 1.54
HMGA2-203ENST00000393578 TEX13BQ9BXU2 312 aa24.67■■□□□ 1.54
HMGA2-203ENST00000393578 UNC45AQ9H3U1 944 aa24.67■■□□□ 1.54
HMGA2-203ENST00000393578 PXMP2Q9NR77 195 aa24.67■■□□□ 1.54
HMGA2-203ENST00000393578 NPHP3-ACAD11A0A0J9YXS1 232 aa24.67■■□□□ 1.54
HMGA2-203ENST00000393578 EIF2AK2P19525 551 aaKnown RBP24.67■■□□□ 1.54
HMGA2-203ENST00000393578 EPHA7Q15375 998 aa24.67■■□□□ 1.54
HMGA2-203ENST00000393578 DYDC2Q96IM9 177 aa24.67■■□□□ 1.54
HMGA2-203ENST00000393578 MAF1Q9H063 256 aa24.67■■□□□ 1.54
HMGA2-203ENST00000393578 BHMT2Q9H2M3 363 aa24.67■■□□□ 1.54
HMGA2-203ENST00000393578 PCDHA2Q9Y5H9 948 aa24.67■■□□□ 1.54
HMGA2-203ENST00000393578 SRCAPQ6ZRS2 3230 aa24.67■■□□□ 1.54
HMGA2-203ENST00000393578 SPDYE16A6NNV3 312 aaPredicted RBP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms